Gene annotation
Transcriptome id Sobic.002G349500.1
Synonym Sb02g037190
Functional annotation inactive receptor kinase At2g26730 precursor, putative, expressed
UniProt C5XCC6
Pfam PF08263 PF00069
Panther DB PTHR27008 PTHR27008:SF46
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G68400 : leucine-rich repeat transmembrane protein kinase family protein
RAP-DB (Rice) LOC_Os07g38640.1 : inactive receptor kinase At2g26730 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048474
Brachypodium KQK15591
Barley HORVU2Hr1G037660.1
Wheat TraesCS2B02G222100 , TraesCS2D02G202600 , TraesCS2A02G185000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G349500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G083500 inactive receptor kinase At2g26730 precursor, putative, expressed -
2 Sobic.002G230000 basic helix-loop-helix, putative, expressed -
3 Sobic.007G067900 expressed protein -
4 Sobic.008G159601 - -
5 Sobic.006G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
6 Sobic.001G135600 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.003G120600 transmembrane protein 136, putative, expressed -
8 Sobic.001G320300 HOTHEAD precursor, putative, expressed -
9 Sobic.005G034500 receptor kinase, putative, expressed -
10 Sobic.007G038000 receptor-like protein kinase 5 precursor, putative, expressed -
11 Sobic.006G187300 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.006G276900 expressed protein -
13 Sobic.006G108100 LTPL81 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.001G247700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
15 Sobic.001G215000 stilbene synthase, putative, expressed -
16 Sobic.007G211200 inactive receptor kinase At2g26730 precursor, putative, expressed -
17 Sobic.001G404400 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.008G176200 - -
19 Sobic.010G206400 expressed protein -
20 Sobic.006G140801 - -


Gene co-expression network
sample Sobic002G349500 Sobic002G349500 Sobic003G083500 Sobic003G083500 Sobic002G349500--Sobic003G083500 Sobic002G230000 Sobic002G230000 Sobic002G349500--Sobic002G230000 Sobic007G067900 Sobic007G067900 Sobic002G349500--Sobic007G067900 Sobic008G159601 Sobic008G159601 Sobic002G349500--Sobic008G159601 Sobic006G097100 Sobic006G097100 Sobic002G349500--Sobic006G097100 Sobic001G135600 Sobic001G135600 Sobic002G349500--Sobic001G135600 Sobic003G120600 Sobic003G120600 Sobic002G349500--Sobic003G120600 Sobic001G320300 Sobic001G320300 Sobic002G349500--Sobic001G320300 Sobic005G034500 Sobic005G034500 Sobic002G349500--Sobic005G034500 Sobic001G247700 Sobic001G247700 Sobic003G083500--Sobic001G247700 Sobic007G211200 Sobic007G211200 Sobic003G083500--Sobic007G211200 Sobic001G265300 Sobic001G265300 Sobic003G083500--Sobic001G265300 Sobic003G083500--Sobic005G034500 Sobic004G357000 Sobic004G357000 Sobic003G083500--Sobic004G357000 Sobic006G108100 Sobic006G108100 Sobic003G083500--Sobic006G108100 Sobic005G129600 Sobic005G129600 Sobic003G083500--Sobic005G129600 Sobic009G025400 Sobic009G025400 Sobic003G083500--Sobic009G025400 Sobic009G257900 Sobic009G257900 Sobic003G083500--Sobic009G257900 Sobic002G230000--Sobic008G159601 Sobic008G013500 Sobic008G013500 Sobic002G230000--Sobic008G013500 Sobic001G472301 Sobic001G472301 Sobic002G230000--Sobic001G472301 Sobic002G230000--Sobic003G120600 Sobic007G153100 Sobic007G153100 Sobic002G230000--Sobic007G153100 Sobic002G230000--Sobic001G320300 Sobic001G511600 Sobic001G511600 Sobic002G230000--Sobic001G511600 Sobic004G234400 Sobic004G234400 Sobic002G230000--Sobic004G234400 Sobic003G004900 Sobic003G004900 Sobic002G230000--Sobic003G004900 Sobic006G276900 Sobic006G276900 Sobic007G067900--Sobic006G276900 Sobic006G140801 Sobic006G140801 Sobic007G067900--Sobic006G140801 Sobic010G213000 Sobic010G213000 Sobic007G067900--Sobic010G213000 Sobic007G067900--Sobic001G135600 Sobic001G088400 Sobic001G088400 Sobic007G067900--Sobic001G088400 Sobic010G206400 Sobic010G206400 Sobic007G067900--Sobic010G206400 Sobic002G206100 Sobic002G206100 Sobic007G067900--Sobic002G206100 Sobic002G113600 Sobic002G113600 Sobic007G067900--Sobic002G113600 Sobic005G164900 Sobic005G164900 Sobic007G067900--Sobic005G164900 Sobic008G159601--Sobic008G013500 Sobic008G159601--Sobic001G472301 Sobic008G159601--Sobic007G153100 Sobic008G159601--Sobic001G511600 Sobic002G179200 Sobic002G179200 Sobic008G159601--Sobic002G179200 Sobic006G092300 Sobic006G092300 Sobic008G159601--Sobic006G092300 Sobic008G159601--Sobic004G234400 Sobic008G159601--Sobic003G004900 Sobic008G159601--Sobic003G120600 Sobic006G097100--Sobic001G320300 Sobic006G187300 Sobic006G187300 Sobic006G097100--Sobic006G187300 Sobic001G215000 Sobic001G215000 Sobic006G097100--Sobic001G215000 Sobic001G511800 Sobic001G511800 Sobic006G097100--Sobic001G511800 Sobic008G176200 Sobic008G176200 Sobic006G097100--Sobic008G176200 Sobic004G041700 Sobic004G041700 Sobic006G097100--Sobic004G041700 Sobic005G054800 Sobic005G054800 Sobic006G097100--Sobic005G054800 Sobic005G010600 Sobic005G010600 Sobic006G097100--Sobic005G010600 Sobic006G097100--Sobic003G004900 Sobic009G141300 Sobic009G141300 Sobic001G135600--Sobic009G141300 Sobic004G302700 Sobic004G302700 Sobic001G135600--Sobic004G302700 Sobic004G211700 Sobic004G211700 Sobic001G135600--Sobic004G211700 Sobic003G089300 Sobic003G089300 Sobic001G135600--Sobic003G089300 Sobic001G135600--Sobic007G211200 Sobic001G046400 Sobic001G046400 Sobic001G135600--Sobic001G046400 Sobic001G286700 Sobic001G286700 Sobic001G135600--Sobic001G286700 Sobic002G011000 Sobic002G011000 Sobic001G135600--Sobic002G011000 Sobic009G254500 Sobic009G254500 Sobic001G135600--Sobic009G254500 Sobic007G125400 Sobic007G125400 Sobic003G120600--Sobic007G125400 Sobic003G120600--Sobic003G004900 Sobic008G004200 Sobic008G004200 Sobic003G120600--Sobic008G004200 Sobic003G120600--Sobic002G179200 Sobic001G438500 Sobic001G438500 Sobic003G120600--Sobic001G438500 Sobic001G179400 Sobic001G179400 Sobic003G120600--Sobic001G179400 Sobic003G120600--Sobic006G092300 Sobic010G065700 Sobic010G065700 Sobic003G120600--Sobic010G065700 Sobic008G012600 Sobic008G012600 Sobic003G120600--Sobic008G012600 Sobic001G320300--Sobic006G097100 Sobic001G320300--Sobic006G187300 Sobic006G137000 Sobic006G137000 Sobic001G320300--Sobic006G137000 Sobic001G320300--Sobic003G004900 Sobic001G320300--Sobic001G215000 Sobic001G320300--Sobic005G010600 Sobic001G320300--Sobic005G054800 Sobic001G320300--Sobic007G153100 Sobic001G320300--Sobic004G041700 Sobic003G027100 Sobic003G027100 Sobic005G034500--Sobic003G027100 Sobic003G178500 Sobic003G178500 Sobic005G034500--Sobic003G178500 Sobic002G032500 Sobic002G032500 Sobic005G034500--Sobic002G032500 Sobic005G055400 Sobic005G055400 Sobic005G034500--Sobic005G055400 Sobic005G034500--Sobic004G357000 Sobic010G166300 Sobic010G166300 Sobic005G034500--Sobic010G166300 Sobic005G034500--Sobic007G211200 Sobic005G034500--Sobic004G211700 Sobic001G341700 Sobic001G341700 Sobic005G034500--Sobic001G341700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.