Gene annotation
Transcriptome id Sobic.003G000700.1
Synonym GIK, Sb03g000250
Functional annotation DNA binding protein, putative, expressed
UniProt C5XJG8
Pfam PF03479
Panther DB PTHR31100 PTHR31100:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42940 : Predicted AT-hook DNA-binding family protein
RAP-DB (Rice) LOC_Os01g14430.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a022760
Brachypodium -
Barley HORVU3Hr1G033710.2 , HORVU3Hr1G033710.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G129600 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.010G167200 expressed protein -
3 Sobic.006G059300 LEML3 - Anther-specific LEM1 family protein precursor, expressed -
4 Sobic.006G127750 - -
5 Sobic.001G110100 expressed protein -
6 Sobic.001G310200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.010G226300 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
8 Sobic.010G062200 expressed protein -
9 Sobic.002G035000 OsGrx_C10 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
10 Sobic.004G118100 harpin-induced protein 1 domain containing protein, expressed -
11 Sobic.009G074900 expressed protein -
12 Sobic.010G050100 expressed protein -
13 Sobic.002G173300 BURP domain containing protein, expressed -
14 Sobic.010G259400 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.010G048200 expressed protein -
16 Sobic.003G011700 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
17 Sobic.002G129100 LTPL27 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
18 Sobic.005G090100 expressed protein -
19 Sobic.001G472400 pumilio domain-containing protein PPD1, putative, expressed -
20 Sobic.004G202800 glycosyl hydrolase family 5 protein, putative, expressed -


Gene co-expression network
sample Sobic003G000700 Sobic003G000700 Sobic006G129600 Sobic006G129600 Sobic003G000700--Sobic006G129600 Sobic010G167200 Sobic010G167200 Sobic003G000700--Sobic010G167200 Sobic006G059300 Sobic006G059300 Sobic003G000700--Sobic006G059300 Sobic006G127750 Sobic006G127750 Sobic003G000700--Sobic006G127750 Sobic001G110100 Sobic001G110100 Sobic003G000700--Sobic001G110100 Sobic001G310200 Sobic001G310200 Sobic003G000700--Sobic001G310200 Sobic010G226300 Sobic010G226300 Sobic003G000700--Sobic010G226300 Sobic010G062200 Sobic010G062200 Sobic003G000700--Sobic010G062200 Sobic002G035000 Sobic002G035000 Sobic003G000700--Sobic002G035000 Sobic006G129600--Sobic010G167200 Sobic006G129600--Sobic010G062200 Sobic006G129600--Sobic003G000700 Sobic006G129600--Sobic001G110100 Sobic006G129600--Sobic006G127750 Sobic009G074900 Sobic009G074900 Sobic006G129600--Sobic009G074900 Sobic010G048200 Sobic010G048200 Sobic006G129600--Sobic010G048200 Sobic010G259400 Sobic010G259400 Sobic006G129600--Sobic010G259400 Sobic009G075000 Sobic009G075000 Sobic006G129600--Sobic009G075000 Sobic010G167200--Sobic010G062200 Sobic010G167200--Sobic010G259400 Sobic010G167200--Sobic009G074900 Sobic010G167200--Sobic009G075000 Sobic003G088200 Sobic003G088200 Sobic010G167200--Sobic003G088200 Sobic002G402233 Sobic002G402233 Sobic010G167200--Sobic002G402233 Sobic003G016000 Sobic003G016000 Sobic010G167200--Sobic003G016000 Sobic007G107500 Sobic007G107500 Sobic010G167200--Sobic007G107500 Sobic007G037400 Sobic007G037400 Sobic010G167200--Sobic007G037400 Sobic004G118100 Sobic004G118100 Sobic006G059300--Sobic004G118100 Sobic002G129100 Sobic002G129100 Sobic006G059300--Sobic002G129100 Sobic002G353100 Sobic002G353100 Sobic006G059300--Sobic002G353100 Sobic001G266100 Sobic001G266100 Sobic006G059300--Sobic001G266100 Sobic003G382400 Sobic003G382400 Sobic006G059300--Sobic003G382400 Sobic003G090650 Sobic003G090650 Sobic006G059300--Sobic003G090650 Sobic010G049600 Sobic010G049600 Sobic006G059300--Sobic010G049600 Sobic008G114200 Sobic008G114200 Sobic006G059300--Sobic008G114200 Sobic001G491400 Sobic001G491400 Sobic006G059300--Sobic001G491400 Sobic001G511600 Sobic001G511600 Sobic006G127750--Sobic001G511600 Sobic001G472301 Sobic001G472301 Sobic006G127750--Sobic001G472301 Sobic003G011700 Sobic003G011700 Sobic006G127750--Sobic003G011700 Sobic001G102600 Sobic001G102600 Sobic006G127750--Sobic001G102600 Sobic006G127750--Sobic010G048200 Sobic001G472400 Sobic001G472400 Sobic006G127750--Sobic001G472400 Sobic010G189366 Sobic010G189366 Sobic006G127750--Sobic010G189366 Sobic002G173300 Sobic002G173300 Sobic006G127750--Sobic002G173300 Sobic004G349150 Sobic004G349150 Sobic006G127750--Sobic004G349150 Sobic001G110100--Sobic009G074900 Sobic001G110100--Sobic003G016000 Sobic010G053300 Sobic010G053300 Sobic001G110100--Sobic010G053300 Sobic001G110100--Sobic010G048200 Sobic001G110100--Sobic010G062200 Sobic001G110100--Sobic009G075000 Sobic001G110100--Sobic003G088200 Sobic001G110100--Sobic002G402233 Sobic001G110100--Sobic002G173300 Sobic001G310200--Sobic001G110100 Sobic001G310200--Sobic002G129100 Sobic001G310200--Sobic004G118100 Sobic001G310200--Sobic010G062200 Sobic004G227900 Sobic004G227900 Sobic001G310200--Sobic004G227900 Sobic008G004200 Sobic008G004200 Sobic001G310200--Sobic008G004200 Sobic001G310200--Sobic010G053300 Sobic005G054800 Sobic005G054800 Sobic001G310200--Sobic005G054800 Sobic006G137000 Sobic006G137000 Sobic001G310200--Sobic006G137000 Sobic010G226300--Sobic010G048200 Sobic010G226300--Sobic006G127750 Sobic010G226300--Sobic001G110100 Sobic010G226300--Sobic009G074900 Sobic010G226300--Sobic010G167200 Sobic010G226300--Sobic002G173300 Sobic010G050100 Sobic010G050100 Sobic010G226300--Sobic010G050100 Sobic004G202800 Sobic004G202800 Sobic010G226300--Sobic004G202800 Sobic010G226300--Sobic003G016000 Sobic010G062200--Sobic010G259400 Sobic010G062200--Sobic009G075000 Sobic010G062200--Sobic009G074900 Sobic010G062200--Sobic010G053300 Sobic010G062200--Sobic003G088200 Sobic010G062200--Sobic003G016000 Sobic003G263800 Sobic003G263800 Sobic010G062200--Sobic003G263800 Sobic008G032400 Sobic008G032400 Sobic010G062200--Sobic008G032400 Sobic002G427550 Sobic002G427550 Sobic010G062200--Sobic002G427550 Sobic002G380800 Sobic002G380800 Sobic002G035000--Sobic002G380800 Sobic003G038800 Sobic003G038800 Sobic002G035000--Sobic003G038800 Sobic009G046000 Sobic009G046000 Sobic002G035000--Sobic009G046000 Sobic002G410600 Sobic002G410600 Sobic002G035000--Sobic002G410600 Sobic003G038700 Sobic003G038700 Sobic002G035000--Sobic003G038700 Sobic006G151800 Sobic006G151800 Sobic002G035000--Sobic006G151800 Sobic005G042200 Sobic005G042200 Sobic002G035000--Sobic005G042200 Sobic007G206000 Sobic007G206000 Sobic002G035000--Sobic007G206000 Sobic005G090100 Sobic005G090100 Sobic002G035000--Sobic005G090100
Octagon: transcription factors


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