Gene annotation
Transcriptome id Sobic.003G106600.2
Synonym HYD1, Sb03g008970
Functional annotation 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed
UniProt A0A1B6Q2J5
Pfam PF05241
Panther DB PTHR14207 PTHR14207:SF0
NCBI CDD KOG4826; C-8,7 sterol isomerase
KEGG Orthology -
Gene Ontology GO:0016125; sterol metabolic process GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G20050 : C-8,7 sterol isomerase
RAP-DB (Rice) LOC_Os01g01369.1 : 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3B02G094700 , TraesCS3A02G079400 , TraesCS3D02G079800
Populus -


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cDNA sequences
Sobic.003G106600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G327500 uridine 5-monophosphate synthase, putative, expressed K13421: uridine monophosphate synthetase
2 Sobic.006G063400 proteasome subunit, putative, expressed -
3 Sobic.001G197300 kinase, putative, expressed -
4 Sobic.001G260000 SAP domain containing protein, expressed -
5 Sobic.001G065900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.006G091800 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
7 Sobic.007G100032 - -
8 Sobic.001G195500 cytochrome P450, putative, expressed -
9 Sobic.010G136400 - -
10 Sobic.001G088300 - -
11 Sobic.001G065800 similar to Glutathione transferase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.004G172800 expressed protein -
13 Sobic.004G094900 expressed protein -
14 Sobic.008G054150 - -
15 Sobic.004G165800 zinc finger family protein, putative, expressed -
16 Sobic.006G057500 flavonol sulfotransferase, putative, expressed -
17 Sobic.003G076600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
18 Sobic.005G192500 cytochrome P450, putative, expressed -
19 Sobic.007G101900 - -
20 Sobic.002G100832 - -


Gene co-expression network
sample Sobic003G106600 Sobic003G106600 Sobic001G327500 Sobic001G327500 Sobic003G106600--Sobic001G327500 Sobic006G063400 Sobic006G063400 Sobic003G106600--Sobic006G063400 Sobic001G197300 Sobic001G197300 Sobic003G106600--Sobic001G197300 Sobic001G260000 Sobic001G260000 Sobic003G106600--Sobic001G260000 Sobic001G065900 Sobic001G065900 Sobic003G106600--Sobic001G065900 Sobic006G091800 Sobic006G091800 Sobic003G106600--Sobic006G091800 Sobic007G100032 Sobic007G100032 Sobic003G106600--Sobic007G100032 Sobic001G195500 Sobic001G195500 Sobic003G106600--Sobic001G195500 Sobic010G136400 Sobic010G136400 Sobic003G106600--Sobic010G136400 Sobic004G165800 Sobic004G165800 Sobic001G327500--Sobic004G165800 Sobic007G159100 Sobic007G159100 Sobic001G327500--Sobic007G159100 Sobic001G381400 Sobic001G381400 Sobic001G327500--Sobic001G381400 Sobic002G102132 Sobic002G102132 Sobic001G327500--Sobic002G102132 Sobic002G090100 Sobic002G090100 Sobic001G327500--Sobic002G090100 Sobic006G063400--Sobic010G136400 Sobic006G063400--Sobic001G197300 Sobic007G101900 Sobic007G101900 Sobic006G063400--Sobic007G101900 Sobic006G063400--Sobic007G100032 Sobic008G121400 Sobic008G121400 Sobic006G063400--Sobic008G121400 Sobic010G110266 Sobic010G110266 Sobic006G063400--Sobic010G110266 Sobic008G104100 Sobic008G104100 Sobic006G063400--Sobic008G104100 Sobic008G112900 Sobic008G112900 Sobic006G063400--Sobic008G112900 Sobic006G063400--Sobic001G065900 Sobic001G197300--Sobic010G136400 Sobic001G197300--Sobic007G100032 Sobic001G197300--Sobic006G063400 Sobic001G197300--Sobic007G101900 Sobic004G094900 Sobic004G094900 Sobic001G197300--Sobic004G094900 Sobic001G197300--Sobic008G104100 Sobic001G197300--Sobic001G065900 Sobic004G135000 Sobic004G135000 Sobic001G197300--Sobic004G135000 Sobic001G197300--Sobic001G381400 Sobic008G054150 Sobic008G054150 Sobic001G260000--Sobic008G054150 Sobic001G343601 Sobic001G343601 Sobic001G260000--Sobic001G343601 Sobic007G169500 Sobic007G169500 Sobic001G260000--Sobic007G169500 Sobic009G009400 Sobic009G009400 Sobic001G260000--Sobic009G009400 Sobic004G311750 Sobic004G311750 Sobic001G260000--Sobic004G311750 Sobic004G115500 Sobic004G115500 Sobic001G260000--Sobic004G115500 Sobic002G146100 Sobic002G146100 Sobic001G260000--Sobic002G146100 Sobic008G029400 Sobic008G029400 Sobic001G260000--Sobic008G029400 Sobic002G182500 Sobic002G182500 Sobic001G260000--Sobic002G182500 Sobic004G263100 Sobic004G263100 Sobic001G065900--Sobic004G263100 Sobic001G065900--Sobic004G165800 Sobic002G100832 Sobic002G100832 Sobic001G065900--Sobic002G100832 Sobic001G065900--Sobic002G102132 Sobic004G092800 Sobic004G092800 Sobic001G065900--Sobic004G092800 Sobic006G057500 Sobic006G057500 Sobic001G065900--Sobic006G057500 Sobic004G251800 Sobic004G251800 Sobic001G065900--Sobic004G251800 Sobic002G388800 Sobic002G388800 Sobic001G065900--Sobic002G388800 Sobic004G341000 Sobic004G341000 Sobic001G065900--Sobic004G341000 Sobic006G091800--Sobic006G057500 Sobic006G091800--Sobic002G100832 Sobic006G091800--Sobic001G065900 Sobic006G091800--Sobic004G165800 Sobic006G091800--Sobic008G054150 Sobic006G091800--Sobic004G341000 Sobic006G091800--Sobic004G263100 Sobic006G091800--Sobic002G102132 Sobic006G091800--Sobic007G169500 Sobic007G100032--Sobic001G197300 Sobic007G100032--Sobic004G094900 Sobic007G100032--Sobic010G136400 Sobic007G100032--Sobic001G381400 Sobic007G100032--Sobic001G065900 Sobic007G100032--Sobic006G063400 Sobic008G079500 Sobic008G079500 Sobic007G100032--Sobic008G079500 Sobic003G060100 Sobic003G060100 Sobic007G100032--Sobic003G060100 Sobic007G100032--Sobic007G101900 Sobic004G172800 Sobic004G172800 Sobic001G195500--Sobic004G172800 Sobic005G171001 Sobic005G171001 Sobic001G195500--Sobic005G171001 Sobic001G195500--Sobic001G381400 Sobic001G195500--Sobic002G388800 Sobic001G195500--Sobic004G094900 Sobic001G195500--Sobic002G090100 Sobic010G136400--Sobic007G101900 Sobic010G136400--Sobic001G197300 Sobic010G136400--Sobic006G063400 Sobic010G136400--Sobic008G121400 Sobic010G136400--Sobic007G100032 Sobic010G136400--Sobic008G104100 Sobic010G136400--Sobic010G110266 Sobic008G092932 Sobic008G092932 Sobic010G136400--Sobic008G092932 Sobic010G136400--Sobic004G135000
Octagon: transcription factors


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