Gene annotation
Transcriptome id Sobic.003G076600.1
Synonym Sb03g006450
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt C5XQ43
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF261
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58900 : Homeodomain-like transcriptional regulator
RAP-DB (Rice) LOC_Os01g04930.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a023494 , Zm00025a035599 , Zm00025a035598
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G176000 zinc finger family protein, putative, expressed -
2 Sobic.008G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
3 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
4 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
5 Sobic.006G107200 molybdopterin biosynthesis protein CNX3, putative, expressed K03639: moaA, GTP 3',8-cyclase
6 Sobic.001G065800 similar to Glutathione transferase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.004G183400 expressed protein -
8 Sobic.003G136000 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
9 Sobic.006G063400 proteasome subunit, putative, expressed -
10 Sobic.002G335200 expressed protein -
11 Sobic.001G495132 - -
12 Sobic.010G204300 expressed protein -
13 Sobic.009G068200 phosphoribosyl transferase, putative, expressed K00760: hprT, hpt, hypoxanthine phosphoribosyltransferase
14 Sobic.001G095300 prenylated rab acceptor, putative, expressed -
15 Sobic.006G267000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.010G107100 expressed protein -
17 Sobic.008G191600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@vesicle-associated membrane protein, putative, expressed -
18 Sobic.003G387200 - -
19 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
20 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6


Gene co-expression network
sample Sobic003G076600 Sobic003G076600 Sobic005G176000 Sobic005G176000 Sobic003G076600--Sobic005G176000 Sobic008G059200 Sobic008G059200 Sobic003G076600--Sobic008G059200 Sobic002G211900 Sobic002G211900 Sobic003G076600--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G076600--Sobic003G181500 Sobic006G107200 Sobic006G107200 Sobic003G076600--Sobic006G107200 Sobic001G065800 Sobic001G065800 Sobic003G076600--Sobic001G065800 Sobic004G183400 Sobic004G183400 Sobic003G076600--Sobic004G183400 Sobic003G136000 Sobic003G136000 Sobic003G076600--Sobic003G136000 Sobic006G063400 Sobic006G063400 Sobic003G076600--Sobic006G063400 Sobic002G296300 Sobic002G296300 Sobic005G176000--Sobic002G296300 Sobic003G248600 Sobic003G248600 Sobic005G176000--Sobic003G248600 Sobic003G220600 Sobic003G220600 Sobic005G176000--Sobic003G220600 Sobic001G403700 Sobic001G403700 Sobic005G176000--Sobic001G403700 Sobic010G253800 Sobic010G253800 Sobic005G176000--Sobic010G253800 Sobic003G115800 Sobic003G115800 Sobic005G176000--Sobic003G115800 Sobic001G283500 Sobic001G283500 Sobic005G176000--Sobic001G283500 Sobic001G434900 Sobic001G434900 Sobic005G176000--Sobic001G434900 Sobic007G186300 Sobic007G186300 Sobic005G176000--Sobic007G186300 Sobic001G281400 Sobic001G281400 Sobic008G059200--Sobic001G281400 Sobic009G177800 Sobic009G177800 Sobic008G059200--Sobic009G177800 Sobic010G149300 Sobic010G149300 Sobic008G059200--Sobic010G149300 Sobic001G399100 Sobic001G399100 Sobic008G059200--Sobic001G399100 Sobic006G173900 Sobic006G173900 Sobic008G059200--Sobic006G173900 Sobic004G187900 Sobic004G187900 Sobic008G059200--Sobic004G187900 Sobic002G423300 Sobic002G423300 Sobic008G059200--Sobic002G423300 Sobic008G059200--Sobic002G211900 Sobic001G288800 Sobic001G288800 Sobic008G059200--Sobic001G288800 Sobic003G249800 Sobic003G249800 Sobic002G211900--Sobic003G249800 Sobic001G015100 Sobic001G015100 Sobic002G211900--Sobic001G015100 Sobic002G211900--Sobic003G181500 Sobic004G177700 Sobic004G177700 Sobic002G211900--Sobic004G177700 Sobic002G046100 Sobic002G046100 Sobic002G211900--Sobic002G046100 Sobic001G477300 Sobic001G477300 Sobic002G211900--Sobic001G477300 Sobic002G312400 Sobic002G312400 Sobic002G211900--Sobic002G312400 Sobic001G095300 Sobic001G095300 Sobic002G211900--Sobic001G095300 Sobic001G308300 Sobic001G308300 Sobic002G211900--Sobic001G308300 Sobic003G181500--Sobic004G187900 Sobic003G350300 Sobic003G350300 Sobic003G181500--Sobic003G350300 Sobic003G181500--Sobic010G149300 Sobic003G181500--Sobic003G249800 Sobic003G181500--Sobic001G288800 Sobic003G181500--Sobic001G281400 Sobic009G023200 Sobic009G023200 Sobic003G181500--Sobic009G023200 Sobic003G181500--Sobic002G211900 Sobic003G181500--Sobic002G046100 Sobic010G117900 Sobic010G117900 Sobic006G107200--Sobic010G117900 Sobic009G068200 Sobic009G068200 Sobic006G107200--Sobic009G068200 Sobic004G221500 Sobic004G221500 Sobic006G107200--Sobic004G221500 Sobic001G231600 Sobic001G231600 Sobic006G107200--Sobic001G231600 Sobic006G107200--Sobic006G173900 Sobic002G183100 Sobic002G183100 Sobic006G107200--Sobic002G183100 Sobic006G084600 Sobic006G084600 Sobic006G107200--Sobic006G084600 Sobic010G084700 Sobic010G084700 Sobic006G107200--Sobic010G084700 Sobic001G348700 Sobic001G348700 Sobic006G107200--Sobic001G348700 Sobic001G065800--Sobic003G136000 Sobic009G243200 Sobic009G243200 Sobic001G065800--Sobic009G243200 Sobic002G250900 Sobic002G250900 Sobic001G065800--Sobic002G250900 Sobic001G032800 Sobic001G032800 Sobic001G065800--Sobic001G032800 Sobic010G223600 Sobic010G223600 Sobic001G065800--Sobic010G223600 Sobic001G425500 Sobic001G425500 Sobic001G065800--Sobic001G425500 Sobic009G194400 Sobic009G194400 Sobic001G065800--Sobic009G194400 Sobic006G207000 Sobic006G207000 Sobic001G065800--Sobic006G207000 Sobic010G196600 Sobic010G196600 Sobic001G065800--Sobic010G196600 Sobic004G183400--Sobic003G248600 Sobic001G329100 Sobic001G329100 Sobic004G183400--Sobic001G329100 Sobic001G147200 Sobic001G147200 Sobic004G183400--Sobic001G147200 Sobic004G350300 Sobic004G350300 Sobic004G183400--Sobic004G350300 Sobic002G122700 Sobic002G122700 Sobic004G183400--Sobic002G122700 Sobic004G183400--Sobic003G220600 Sobic004G183400--Sobic005G176000 Sobic004G183400--Sobic007G186300 Sobic005G195200 Sobic005G195200 Sobic004G183400--Sobic005G195200 Sobic001G499300 Sobic001G499300 Sobic003G136000--Sobic001G499300 Sobic003G136000--Sobic010G223600 Sobic003G136000--Sobic001G032800 Sobic004G055200 Sobic004G055200 Sobic003G136000--Sobic004G055200 Sobic003G136000--Sobic010G149300 Sobic003G130800 Sobic003G130800 Sobic003G136000--Sobic003G130800 Sobic003G136000--Sobic003G181500 Sobic003G136000--Sobic001G477300 Sobic001G124600 Sobic001G124600 Sobic003G136000--Sobic001G124600 Sobic010G136400 Sobic010G136400 Sobic006G063400--Sobic010G136400 Sobic001G197300 Sobic001G197300 Sobic006G063400--Sobic001G197300 Sobic007G101900 Sobic007G101900 Sobic006G063400--Sobic007G101900 Sobic007G100032 Sobic007G100032 Sobic006G063400--Sobic007G100032 Sobic008G121400 Sobic008G121400 Sobic006G063400--Sobic008G121400 Sobic010G110266 Sobic010G110266 Sobic006G063400--Sobic010G110266 Sobic008G104100 Sobic008G104100 Sobic006G063400--Sobic008G104100 Sobic008G112900 Sobic008G112900 Sobic006G063400--Sobic008G112900 Sobic001G065900 Sobic001G065900 Sobic006G063400--Sobic001G065900
Octagon: transcription factors


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