Gene annotation
Transcriptome id Sobic.001G065800.1
Synonym GSTU25, Sb01g005990, ATGSTU25,
Functional annotation similar to Glutathione transferase (PubMedID : 29862293)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glutathione S-transferase, putative, expressed
UniProt C5WY74
Pfam PF13410 PF13417
Panther DB PTHR11260 PTHR11260:SF174
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G17180 : glutathione S-transferase TAU 25
RAP-DB (Rice) LOC_Os09g20220.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) Zm00025a042293 , Zm00025a008471 , Zm00025a045034
Brachypodium PNT72192 , KQK16347
Barley HORVU5Hr1G103420.1 , HORVU5Hr1G103430.1 , HORVU5Hr1G103430.2 , HORVU3Hr1G083520.1
Wheat TraesCS5A02G424100 , TraesCS5B02G426400 , TraesCS3B02G409200 , TraesCS5D02G432700
Populus -


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cDNA sequences
Sobic.001G065800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G136000 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
2 Sobic.009G243200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
3 Sobic.002G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G032800 armadillo/beta-catenin-like repeat containing protein, expressed K09562: HSPBP1, hsp70-interacting protein
5 Sobic.010G223600 ubiquitin family protein, putative, expressed K08770: ubiquitin C
6 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
7 Sobic.009G194400 expressed protein -
8 Sobic.006G207000 expressed protein -
9 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G393500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ca2+ sensors group(PubMedID : 30367619)@EF hand family protein, putative, expressed K02183: calmodulin
11 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
12 Sobic.004G341000 OsFBX66 - F-box domain containing protein, expressed -
13 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
14 Sobic.004G037000 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
15 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
16 Sobic.009G068200 phosphoribosyl transferase, putative, expressed K00760: hprT, hpt, hypoxanthine phosphoribosyltransferase
17 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
18 Sobic.004G115500 expressed protein -
19 Sobic.001G510600 expressed protein -
20 Sobic.004G097100 F-box family protein, putative, expressed -


Gene co-expression network
sample Sobic001G065800 Sobic001G065800 Sobic003G136000 Sobic003G136000 Sobic001G065800--Sobic003G136000 Sobic009G243200 Sobic009G243200 Sobic001G065800--Sobic009G243200 Sobic002G250900 Sobic002G250900 Sobic001G065800--Sobic002G250900 Sobic001G032800 Sobic001G032800 Sobic001G065800--Sobic001G032800 Sobic010G223600 Sobic010G223600 Sobic001G065800--Sobic010G223600 Sobic001G425500 Sobic001G425500 Sobic001G065800--Sobic001G425500 Sobic009G194400 Sobic009G194400 Sobic001G065800--Sobic009G194400 Sobic006G207000 Sobic006G207000 Sobic001G065800--Sobic006G207000 Sobic010G196600 Sobic010G196600 Sobic001G065800--Sobic010G196600 Sobic001G499300 Sobic001G499300 Sobic003G136000--Sobic001G499300 Sobic003G136000--Sobic010G223600 Sobic003G136000--Sobic001G032800 Sobic004G055200 Sobic004G055200 Sobic003G136000--Sobic004G055200 Sobic010G149300 Sobic010G149300 Sobic003G136000--Sobic010G149300 Sobic003G130800 Sobic003G130800 Sobic003G136000--Sobic003G130800 Sobic003G181500 Sobic003G181500 Sobic003G136000--Sobic003G181500 Sobic001G477300 Sobic001G477300 Sobic003G136000--Sobic001G477300 Sobic001G124600 Sobic001G124600 Sobic003G136000--Sobic001G124600 Sobic004G109700 Sobic004G109700 Sobic009G243200--Sobic004G109700 Sobic009G243200--Sobic010G196600 Sobic009G243200--Sobic009G194400 Sobic004G109600 Sobic004G109600 Sobic009G243200--Sobic004G109600 Sobic009G243200--Sobic001G425500 Sobic009G243200--Sobic010G223600 Sobic002G388900 Sobic002G388900 Sobic009G243200--Sobic002G388900 Sobic001G425600 Sobic001G425600 Sobic009G243200--Sobic001G425600 Sobic002G339000 Sobic002G339000 Sobic009G243200--Sobic002G339000 Sobic002G388800 Sobic002G388800 Sobic002G250900--Sobic002G388800 Sobic002G250900--Sobic009G194400 Sobic001G143100 Sobic001G143100 Sobic002G250900--Sobic001G143100 Sobic003G060100 Sobic003G060100 Sobic002G250900--Sobic003G060100 Sobic003G370600 Sobic003G370600 Sobic002G250900--Sobic003G370600 Sobic002G269100 Sobic002G269100 Sobic002G250900--Sobic002G269100 Sobic004G097100 Sobic004G097100 Sobic002G250900--Sobic004G097100 Sobic004G092800 Sobic004G092800 Sobic002G250900--Sobic004G092800 Sobic001G065900 Sobic001G065900 Sobic002G250900--Sobic001G065900 Sobic001G032800--Sobic010G223600 Sobic001G426000 Sobic001G426000 Sobic001G032800--Sobic001G426000 Sobic003G310700 Sobic003G310700 Sobic001G032800--Sobic003G310700 Sobic006G267200 Sobic006G267200 Sobic001G032800--Sobic006G267200 Sobic001G032800--Sobic003G136000 Sobic002G211900 Sobic002G211900 Sobic001G032800--Sobic002G211900 Sobic009G169000 Sobic009G169000 Sobic001G032800--Sobic009G169000 Sobic001G320900 Sobic001G320900 Sobic001G032800--Sobic001G320900 Sobic001G108200 Sobic001G108200 Sobic001G032800--Sobic001G108200 Sobic003G393900 Sobic003G393900 Sobic010G223600--Sobic003G393900 Sobic009G036000 Sobic009G036000 Sobic010G223600--Sobic009G036000 Sobic009G247900 Sobic009G247900 Sobic010G223600--Sobic009G247900 Sobic010G223600--Sobic002G339000 Sobic009G122400 Sobic009G122400 Sobic010G223600--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic010G223600--Sobic004G169200 Sobic001G471200 Sobic001G471200 Sobic010G223600--Sobic001G471200 Sobic009G224100 Sobic009G224100 Sobic010G223600--Sobic009G224100 Sobic001G035100 Sobic001G035100 Sobic010G223600--Sobic001G035100 Sobic001G425500--Sobic001G425600 Sobic001G425500--Sobic004G109700 Sobic001G425500--Sobic009G194400 Sobic001G425500--Sobic010G196600 Sobic004G273300 Sobic004G273300 Sobic001G425500--Sobic004G273300 Sobic003G323201 Sobic003G323201 Sobic001G425500--Sobic003G323201 Sobic001G425500--Sobic004G092800 Sobic001G425500--Sobic004G109600 Sobic001G481300 Sobic001G481300 Sobic001G425500--Sobic001G481300 Sobic009G194400--Sobic010G196600 Sobic009G194400--Sobic001G425500 Sobic009G194400--Sobic003G323201 Sobic009G194400--Sobic001G425600 Sobic009G194400--Sobic003G370600 Sobic009G194400--Sobic004G109700 Sobic009G194400--Sobic004G097100 Sobic009G194400--Sobic002G388900 Sobic009G194400--Sobic004G092800 Sobic003G116800 Sobic003G116800 Sobic006G207000--Sobic003G116800 Sobic004G086400 Sobic004G086400 Sobic006G207000--Sobic004G086400 Sobic006G207100 Sobic006G207100 Sobic006G207000--Sobic006G207100 Sobic006G207000--Sobic010G196600 Sobic006G207000--Sobic002G339000 Sobic003G148300 Sobic003G148300 Sobic006G207000--Sobic003G148300 Sobic006G207000--Sobic001G425500 Sobic007G155200 Sobic007G155200 Sobic006G207000--Sobic007G155200 Sobic004G004500 Sobic004G004500 Sobic006G207000--Sobic004G004500 Sobic010G196600--Sobic009G194400 Sobic010G196600--Sobic001G425500 Sobic010G196600--Sobic004G109700 Sobic004G283500 Sobic004G283500 Sobic010G196600--Sobic004G283500 Sobic010G196600--Sobic002G388900 Sobic010G196600--Sobic003G323201 Sobic008G187001 Sobic008G187001 Sobic010G196600--Sobic008G187001 Sobic010G196600--Sobic001G425600 Sobic010G196600--Sobic004G109600
Octagon: transcription factors


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