Gene annotation
Transcriptome id Sobic.009G243200.1
Synonym Sb09g029480
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
DUF1645 domain containing protein, putative, expressed
UniProt C5YW47
Pfam PF07816
Panther DB PTHR33095 PTHR33095:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G23710 : Protein of unknown function (DUF1645)
RAP-DB (Rice) LOC_Os05g50230.1 : DUF1645 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a044686
Brachypodium -
Barley HORVU1Hr1G091340.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G243200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G109700 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.010G196600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.009G194400 expressed protein -
4 Sobic.004G109600 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G425500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
6 Sobic.010G223600 ubiquitin family protein, putative, expressed K08770: ubiquitin C
7 Sobic.002G388900 Upregulated in cold tolerant sorghum under stress(PubMedID : 26645959)@cytochrome P450 72A1, putative, expressed -
8 Sobic.001G425600 "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
9 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
10 Sobic.004G308900 AP2 domain containing protein, expressed -
11 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
12 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
13 Sobic.007G214600 EF hand family protein, putative, expressed -
14 Sobic.008G187001 - K09422: transcription factor MYB, plant
15 Sobic.004G169200 U-box domain-containing protein, putative, expressed -
16 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
17 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
18 Sobic.009G036000 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
19 Sobic.003G323201 - -
20 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic009G243200 Sobic009G243200 Sobic004G109700 Sobic004G109700 Sobic009G243200--Sobic004G109700 Sobic010G196600 Sobic010G196600 Sobic009G243200--Sobic010G196600 Sobic009G194400 Sobic009G194400 Sobic009G243200--Sobic009G194400 Sobic004G109600 Sobic004G109600 Sobic009G243200--Sobic004G109600 Sobic001G425500 Sobic001G425500 Sobic009G243200--Sobic001G425500 Sobic010G223600 Sobic010G223600 Sobic009G243200--Sobic010G223600 Sobic002G388900 Sobic002G388900 Sobic009G243200--Sobic002G388900 Sobic001G425600 Sobic001G425600 Sobic009G243200--Sobic001G425600 Sobic002G339000 Sobic002G339000 Sobic009G243200--Sobic002G339000 Sobic004G109700--Sobic004G109600 Sobic004G109700--Sobic001G425600 Sobic004G109700--Sobic001G425500 Sobic001G481300 Sobic001G481300 Sobic004G109700--Sobic001G481300 Sobic004G109700--Sobic010G196600 Sobic004G109700--Sobic009G194400 Sobic003G323201 Sobic003G323201 Sobic004G109700--Sobic003G323201 Sobic007G214600 Sobic007G214600 Sobic004G109700--Sobic007G214600 Sobic001G279350 Sobic001G279350 Sobic004G109700--Sobic001G279350 Sobic010G196600--Sobic009G194400 Sobic010G196600--Sobic001G425500 Sobic010G196600--Sobic004G109700 Sobic004G283500 Sobic004G283500 Sobic010G196600--Sobic004G283500 Sobic010G196600--Sobic002G388900 Sobic010G196600--Sobic003G323201 Sobic008G187001 Sobic008G187001 Sobic010G196600--Sobic008G187001 Sobic010G196600--Sobic001G425600 Sobic010G196600--Sobic004G109600 Sobic009G194400--Sobic010G196600 Sobic009G194400--Sobic001G425500 Sobic009G194400--Sobic003G323201 Sobic009G194400--Sobic001G425600 Sobic003G370600 Sobic003G370600 Sobic009G194400--Sobic003G370600 Sobic009G194400--Sobic004G109700 Sobic004G097100 Sobic004G097100 Sobic009G194400--Sobic004G097100 Sobic009G194400--Sobic002G388900 Sobic004G092800 Sobic004G092800 Sobic009G194400--Sobic004G092800 Sobic004G109600--Sobic001G481300 Sobic003G355100 Sobic003G355100 Sobic004G109600--Sobic003G355100 Sobic004G109600--Sobic007G214600 Sobic004G109600--Sobic004G109700 Sobic003G197200 Sobic003G197200 Sobic004G109600--Sobic003G197200 Sobic010G198500 Sobic010G198500 Sobic004G109600--Sobic010G198500 Sobic003G148600 Sobic003G148600 Sobic004G109600--Sobic003G148600 Sobic001G371800 Sobic001G371800 Sobic004G109600--Sobic001G371800 Sobic001G201200 Sobic001G201200 Sobic004G109600--Sobic001G201200 Sobic001G425500--Sobic001G425600 Sobic001G425500--Sobic004G109700 Sobic001G425500--Sobic009G194400 Sobic001G425500--Sobic010G196600 Sobic004G273300 Sobic004G273300 Sobic001G425500--Sobic004G273300 Sobic001G425500--Sobic003G323201 Sobic001G425500--Sobic004G092800 Sobic001G425500--Sobic004G109600 Sobic001G425500--Sobic001G481300 Sobic003G393900 Sobic003G393900 Sobic010G223600--Sobic003G393900 Sobic009G036000 Sobic009G036000 Sobic010G223600--Sobic009G036000 Sobic009G247900 Sobic009G247900 Sobic010G223600--Sobic009G247900 Sobic010G223600--Sobic002G339000 Sobic009G122400 Sobic009G122400 Sobic010G223600--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic010G223600--Sobic004G169200 Sobic001G471200 Sobic001G471200 Sobic010G223600--Sobic001G471200 Sobic009G224100 Sobic009G224100 Sobic010G223600--Sobic009G224100 Sobic001G035100 Sobic001G035100 Sobic010G223600--Sobic001G035100 Sobic002G388900--Sobic008G187001 Sobic001G256700 Sobic001G256700 Sobic002G388900--Sobic001G256700 Sobic009G144700 Sobic009G144700 Sobic002G388900--Sobic009G144700 Sobic001G330100 Sobic001G330100 Sobic002G388900--Sobic001G330100 Sobic009G241801 Sobic009G241801 Sobic002G388900--Sobic009G241801 Sobic009G032000 Sobic009G032000 Sobic002G388900--Sobic009G032000 Sobic004G352000 Sobic004G352000 Sobic002G388900--Sobic004G352000 Sobic004G219800 Sobic004G219800 Sobic002G388900--Sobic004G219800 Sobic004G308900 Sobic004G308900 Sobic002G388900--Sobic004G308900 Sobic001G425600--Sobic001G425500 Sobic001G425600--Sobic004G109700 Sobic001G425600--Sobic004G273300 Sobic001G425600--Sobic009G194400 Sobic001G425600--Sobic004G109600 Sobic001G425600--Sobic001G481300 Sobic001G425600--Sobic010G196600 Sobic001G425600--Sobic001G279350 Sobic001G425600--Sobic003G323201 Sobic004G004500 Sobic004G004500 Sobic002G339000--Sobic004G004500 Sobic002G339000--Sobic001G256700 Sobic007G036900 Sobic007G036900 Sobic002G339000--Sobic007G036900 Sobic003G148300 Sobic003G148300 Sobic002G339000--Sobic003G148300 Sobic001G195200 Sobic001G195200 Sobic002G339000--Sobic001G195200 Sobic002G339000--Sobic004G169200 Sobic004G108200 Sobic004G108200 Sobic002G339000--Sobic004G108200 Sobic002G395300 Sobic002G395300 Sobic002G339000--Sobic002G395300 Sobic002G339000--Sobic007G214600
Octagon: transcription factors


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