Gene annotation
Transcriptome id Sobic.001G032800.1
Synonym Fes1A, Sb01g003070
Functional annotation armadillo/beta-catenin-like repeat containing protein, expressed
UniProt A0A1B6QH46
Pfam PF08609
Panther DB PTHR19316 PTHR19316:SF17
NCBI CDD KOG2160; Armadillo/beta-catenin-like repeat-containing protein
KEGG Orthology K09562; HSPBP1, hsp70-interacting protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09350 : Fes1A
RAP-DB (Rice) LOC_Os03g60780.1 : armadillo/beta-catenin-like repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a008822 , Zm00025a016418
Brachypodium KQK12413 , KQK12412
Barley -
Wheat TraesCS5B02G495500 , TraesCS5B02G495500 , TraesCS5D02G496000 , TraesCS5D02G496000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G032800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G223600 ubiquitin family protein, putative, expressed K08770: ubiquitin C
2 Sobic.001G426000 Up-reguralion under heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
3 Sobic.003G310700 mal d 1-associated protein, putative, expressed -
4 Sobic.006G267200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
5 Sobic.003G136000 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
6 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
7 Sobic.009G169000 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01568: PDC, pyruvate decarboxylase
8 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.001G108200 expressed protein -
10 Sobic.010G149300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
11 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
12 Sobic.003G355100 expressed protein -
13 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -
14 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
15 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
16 Sobic.002G339000 OsFBX257 - F-box domain containing protein, expressed -
17 Sobic.003G377900 chitin-inducible gibberellin-responsive protein, putative, expressed -
18 Sobic.009G036000 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
19 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
20 Sobic.001G481300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G032800 Sobic001G032800 Sobic010G223600 Sobic010G223600 Sobic001G032800--Sobic010G223600 Sobic001G426000 Sobic001G426000 Sobic001G032800--Sobic001G426000 Sobic003G310700 Sobic003G310700 Sobic001G032800--Sobic003G310700 Sobic006G267200 Sobic006G267200 Sobic001G032800--Sobic006G267200 Sobic003G136000 Sobic003G136000 Sobic001G032800--Sobic003G136000 Sobic002G211900 Sobic002G211900 Sobic001G032800--Sobic002G211900 Sobic009G169000 Sobic009G169000 Sobic001G032800--Sobic009G169000 Sobic001G320900 Sobic001G320900 Sobic001G032800--Sobic001G320900 Sobic001G108200 Sobic001G108200 Sobic001G032800--Sobic001G108200 Sobic003G393900 Sobic003G393900 Sobic010G223600--Sobic003G393900 Sobic009G036000 Sobic009G036000 Sobic010G223600--Sobic009G036000 Sobic009G247900 Sobic009G247900 Sobic010G223600--Sobic009G247900 Sobic002G339000 Sobic002G339000 Sobic010G223600--Sobic002G339000 Sobic009G122400 Sobic009G122400 Sobic010G223600--Sobic009G122400 Sobic004G169200 Sobic004G169200 Sobic010G223600--Sobic004G169200 Sobic001G471200 Sobic001G471200 Sobic010G223600--Sobic001G471200 Sobic009G224100 Sobic009G224100 Sobic010G223600--Sobic009G224100 Sobic001G035100 Sobic001G035100 Sobic010G223600--Sobic001G035100 Sobic004G228900 Sobic004G228900 Sobic001G426000--Sobic004G228900 Sobic001G426000--Sobic009G169000 Sobic001G338600 Sobic001G338600 Sobic001G426000--Sobic001G338600 Sobic010G196600 Sobic010G196600 Sobic001G426000--Sobic010G196600 Sobic001G426000--Sobic003G310700 Sobic001G426000--Sobic001G320900 Sobic003G144700 Sobic003G144700 Sobic001G426000--Sobic003G144700 Sobic002G282300 Sobic002G282300 Sobic001G426000--Sobic002G282300 Sobic002G278500 Sobic002G278500 Sobic001G426000--Sobic002G278500 Sobic003G310700--Sobic001G426000 Sobic003G310700--Sobic001G032800 Sobic003G310700--Sobic004G228900 Sobic004G036600 Sobic004G036600 Sobic003G310700--Sobic004G036600 Sobic009G217000 Sobic009G217000 Sobic003G310700--Sobic009G217000 Sobic003G310700--Sobic006G267200 Sobic003G310700--Sobic009G169000 Sobic003G310700--Sobic010G223600 Sobic006G194000 Sobic006G194000 Sobic003G310700--Sobic006G194000 Sobic001G459800 Sobic001G459800 Sobic006G267200--Sobic001G459800 Sobic004G065500 Sobic004G065500 Sobic006G267200--Sobic004G065500 Sobic006G267200--Sobic003G393900 Sobic001G405500 Sobic001G405500 Sobic006G267200--Sobic001G405500 Sobic009G141800 Sobic009G141800 Sobic006G267200--Sobic009G141800 Sobic010G086200 Sobic010G086200 Sobic006G267200--Sobic010G086200 Sobic004G146000 Sobic004G146000 Sobic006G267200--Sobic004G146000 Sobic004G141200 Sobic004G141200 Sobic006G267200--Sobic004G141200 Sobic006G267200--Sobic001G320900 Sobic001G499300 Sobic001G499300 Sobic003G136000--Sobic001G499300 Sobic003G136000--Sobic010G223600 Sobic003G136000--Sobic001G032800 Sobic004G055200 Sobic004G055200 Sobic003G136000--Sobic004G055200 Sobic010G149300 Sobic010G149300 Sobic003G136000--Sobic010G149300 Sobic003G130800 Sobic003G130800 Sobic003G136000--Sobic003G130800 Sobic003G181500 Sobic003G181500 Sobic003G136000--Sobic003G181500 Sobic001G477300 Sobic001G477300 Sobic003G136000--Sobic001G477300 Sobic001G124600 Sobic001G124600 Sobic003G136000--Sobic001G124600 Sobic003G249800 Sobic003G249800 Sobic002G211900--Sobic003G249800 Sobic001G015100 Sobic001G015100 Sobic002G211900--Sobic001G015100 Sobic002G211900--Sobic003G181500 Sobic004G177700 Sobic004G177700 Sobic002G211900--Sobic004G177700 Sobic002G046100 Sobic002G046100 Sobic002G211900--Sobic002G046100 Sobic002G211900--Sobic001G477300 Sobic002G312400 Sobic002G312400 Sobic002G211900--Sobic002G312400 Sobic001G095300 Sobic001G095300 Sobic002G211900--Sobic001G095300 Sobic001G308300 Sobic001G308300 Sobic002G211900--Sobic001G308300 Sobic009G169000--Sobic001G320900 Sobic009G169000--Sobic003G144700 Sobic004G280200 Sobic004G280200 Sobic009G169000--Sobic004G280200 Sobic003G197200 Sobic003G197200 Sobic009G169000--Sobic003G197200 Sobic003G355100 Sobic003G355100 Sobic009G169000--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic009G169000--Sobic007G214600 Sobic003G148600 Sobic003G148600 Sobic009G169000--Sobic003G148600 Sobic001G107800 Sobic001G107800 Sobic009G169000--Sobic001G107800 Sobic007G026600 Sobic007G026600 Sobic009G169000--Sobic007G026600 Sobic001G320900--Sobic009G036000 Sobic001G320900--Sobic003G144700 Sobic001G320900--Sobic009G169000 Sobic001G391500 Sobic001G391500 Sobic001G320900--Sobic001G391500 Sobic001G320900--Sobic003G148600 Sobic009G036100 Sobic009G036100 Sobic001G320900--Sobic009G036100 Sobic001G320900--Sobic003G197200 Sobic001G320900--Sobic003G355100 Sobic001G320900--Sobic001G405500 Sobic001G108200--Sobic004G141200 Sobic001G108200--Sobic003G393900 Sobic004G100700 Sobic004G100700 Sobic001G108200--Sobic004G100700 Sobic003G369100 Sobic003G369100 Sobic001G108200--Sobic003G369100 Sobic003G086600 Sobic003G086600 Sobic001G108200--Sobic003G086600 Sobic001G108200--Sobic003G355100 Sobic001G108200--Sobic007G214600 Sobic003G382800 Sobic003G382800 Sobic001G108200--Sobic003G382800 Sobic005G099000 Sobic005G099000 Sobic001G108200--Sobic005G099000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.