Gene annotation
Transcriptome id Sobic.003G184633.1
Synonym -
Functional annotation -
UniProt A0A1W0VXW9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G184650 - -
2 Sobic.002G314600 expressed protein -
3 Sobic.001G485400 "BG1(Ortholog in rice:Liu et al., 2015)"(PubMedID : 31659849)@expressed protein -
4 Sobic.005G112900 arginyl-tRNA synthetase, putative, expressed -
5 Sobic.001G494600 expressed protein -
6 Sobic.003G184765 - -
7 Sobic.003G089801 - -
8 Sobic.005G130800 membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.001G261750 - -
10 Sobic.001G261750 - -
11 Sobic.001G261750 - -
12 Sobic.001G261750 - -
13 Sobic.001G261750 - -
14 Sobic.010G091700 "PGL2/OsBUL1(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659932)@helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.003G299700 TCP4(PubMedID : 24676859)@CIN-like (ClassII) Subclade 16 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@slTCP3, putative, expressed -
16 Sobic.001G356400 expansin precursor, putative, expressed -
17 Sobic.004G180800 seven in absentia protein family domain containing protein, expressed -
18 Sobic.005G060666 - -
19 Sobic.007G179750 - -
20 Sobic.010G006400 zinc finger, C3HC4 type domain containing protein, expressed K16281: RING-H2 zinc finger protein RHA1


Gene co-expression network
sample Sobic003G184633 Sobic003G184633 Sobic001G184650 Sobic001G184650 Sobic003G184633--Sobic001G184650 Sobic002G314600 Sobic002G314600 Sobic003G184633--Sobic002G314600 Sobic001G485400 Sobic001G485400 Sobic003G184633--Sobic001G485400 Sobic005G112900 Sobic005G112900 Sobic003G184633--Sobic005G112900 Sobic001G494600 Sobic001G494600 Sobic003G184633--Sobic001G494600 Sobic003G184765 Sobic003G184765 Sobic003G184633--Sobic003G184765 Sobic003G089801 Sobic003G089801 Sobic003G184633--Sobic003G089801 Sobic005G130800 Sobic005G130800 Sobic003G184633--Sobic005G130800 Sobic001G261750 Sobic001G261750 Sobic003G184633--Sobic001G261750 Sobic001G184650--Sobic001G261750 Sobic001G184650--Sobic001G494600 Sobic002G093600 Sobic002G093600 Sobic001G184650--Sobic002G093600 Sobic003G237500 Sobic003G237500 Sobic001G184650--Sobic003G237500 Sobic008G028533 Sobic008G028533 Sobic001G184650--Sobic008G028533 Sobic006G020500 Sobic006G020500 Sobic002G314600--Sobic006G020500 Sobic007G094600 Sobic007G094600 Sobic002G314600--Sobic007G094600 Sobic006G020600 Sobic006G020600 Sobic002G314600--Sobic006G020600 Sobic010G091700 Sobic010G091700 Sobic002G314600--Sobic010G091700 Sobic008G124100 Sobic008G124100 Sobic002G314600--Sobic008G124100 Sobic002G051400 Sobic002G051400 Sobic002G314600--Sobic002G051400 Sobic002G314600--Sobic005G130800 Sobic002G314600--Sobic003G089801 Sobic009G109450 Sobic009G109450 Sobic002G314600--Sobic009G109450 Sobic004G291800 Sobic004G291800 Sobic001G485400--Sobic004G291800 Sobic004G020401 Sobic004G020401 Sobic001G485400--Sobic004G020401 Sobic007G132600 Sobic007G132600 Sobic001G485400--Sobic007G132600 Sobic009G180200 Sobic009G180200 Sobic001G485400--Sobic009G180200 Sobic009G197200 Sobic009G197200 Sobic001G485400--Sobic009G197200 Sobic003G034500 Sobic003G034500 Sobic001G485400--Sobic003G034500 Sobic002G221900 Sobic002G221900 Sobic001G485400--Sobic002G221900 Sobic003G044900 Sobic003G044900 Sobic001G485400--Sobic003G044900 Sobic009G183500 Sobic009G183500 Sobic001G485400--Sobic009G183500 Sobic005G101850 Sobic005G101850 Sobic005G112900--Sobic005G101850 Sobic005G112900--Sobic003G184633 Sobic010G113150 Sobic010G113150 Sobic005G112900--Sobic010G113150 Sobic005G112900--Sobic001G184650 Sobic010G006400 Sobic010G006400 Sobic005G112900--Sobic010G006400 Sobic001G166000 Sobic001G166000 Sobic005G112900--Sobic001G166000 Sobic002G216801 Sobic002G216801 Sobic005G112900--Sobic002G216801 Sobic005G218100 Sobic005G218100 Sobic005G112900--Sobic005G218100 Sobic002G144025 Sobic002G144025 Sobic005G112900--Sobic002G144025 Sobic001G494600--Sobic001G261750 Sobic001G494600--Sobic002G093600 Sobic001G494600--Sobic008G028533 Sobic008G145200 Sobic008G145200 Sobic001G494600--Sobic008G145200 Sobic006G007300 Sobic006G007300 Sobic001G494600--Sobic006G007300 Sobic001G044800 Sobic001G044800 Sobic003G184765--Sobic001G044800 Sobic003G184765--Sobic001G494600 Sobic004G143801 Sobic004G143801 Sobic003G184765--Sobic004G143801 Sobic003G184765--Sobic002G093600 Sobic007G183100 Sobic007G183100 Sobic003G184765--Sobic007G183100 Sobic002G298400 Sobic002G298400 Sobic003G184765--Sobic002G298400 Sobic007G168000 Sobic007G168000 Sobic003G184765--Sobic007G168000 Sobic002G391700 Sobic002G391700 Sobic003G184765--Sobic002G391700 Sobic002G040400 Sobic002G040400 Sobic003G184765--Sobic002G040400 Sobic004G180800 Sobic004G180800 Sobic003G089801--Sobic004G180800 Sobic009G113200 Sobic009G113200 Sobic003G089801--Sobic009G113200 Sobic010G175700 Sobic010G175700 Sobic003G089801--Sobic010G175700 Sobic003G035332 Sobic003G035332 Sobic003G089801--Sobic003G035332 Sobic003G089801--Sobic005G130800 Sobic002G099401 Sobic002G099401 Sobic003G089801--Sobic002G099401 Sobic010G221700 Sobic010G221700 Sobic003G089801--Sobic010G221700 Sobic005G130800--Sobic003G089801 Sobic005G130800--Sobic002G314600 Sobic005G130800--Sobic004G180800 Sobic005G130800--Sobic006G020500 Sobic005G130800--Sobic007G094600 Sobic005G130800--Sobic006G020600 Sobic005G130800--Sobic009G113200 Sobic005G130800--Sobic010G175700 Sobic005G130800--Sobic008G124100 Sobic001G261750--Sobic001G261750 Sobic001G261750--Sobic001G494600 Sobic001G261750--Sobic002G093600 Sobic001G261750--Sobic008G028533 Sobic001G261750--Sobic008G145200 Sobic001G261750--Sobic006G007300
Octagon: transcription factors


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