Gene annotation
Transcriptome id Sobic.003G247100.2,Sobic.003G247100.1,Sobic.003G247100.3
Synonym ATAPA1, Sb03g030350, APA1
Functional annotation aspartic proteinase oryzasin-1 precursor, putative, expressed
UniProt A0A1B6Q547 , A0A1B6Q541
Pfam PF03489 PF05184 PF00026
Panther DB PTHR13683 PTHR13683:SF312
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology K08245; phytepsin
Gene Ontology GO:0006629; lipid metabolic process GO:0006508proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G11910 : aspartic proteinase A1
RAP-DB (Rice) LOC_Os01g47410.1,LOC_Os01g47410.2 : aspartic proteinase oryzasin-1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044601 , Zm00025a036631 , Zm00025a055336
Brachypodium PNT72537 , KQK04817
Barley HORVU6Hr1G087820.3 , HORVU6Hr1G087820.2 , HORVU6Hr1G087820.1 , HORVU1Hr1G089360.1 , HORVU1Hr1G089360.3 , HORVU1Hr1G089360.2 , HORVU1Hr1G089360.5 , HORVU1Hr1G089360.4
Wheat TraesCS3A02G241100 , TraesCS6A02G372500 , TraesCS6B02G410400 , TraesCS3B02G269300 , TraesCS1D02G412200 , TraesCS1D02G412200 , TraesCS6D02G356600 , TraesCS1B02G434000 , TraesCS6D02G356600 , TraesCS1A02G404500 , TraesCS1A02G404500 , TraesCS3D02G241400 , TraesCS3D02G241400
Populus -


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cDNA sequences
Sobic.003G247100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G193000 EARLY flowering protein, putative, expressed -
2 Sobic.002G320300 MYB family transcription factor, putative, expressed -
3 Sobic.010G207450 - -
4 Sobic.003G231200 - -
5 Sobic.002G059100 OsFBX239 - F-box domain containing protein, expressed -
6 Sobic.006G022301 - -
7 Sobic.005G102600 - -
8 Sobic.001G297300 - -
9 Sobic.002G018250 - -
10 Sobic.002G018000 - -
11 Sobic.001G059800 cupin domain containing protein, expressed -
12 Sobic.001G197700 - -
13 Sobic.003G048900 - -
14 Sobic.007G091800 GDU1, putative, expressed -
15 Sobic.010G010600 - -
16 Sobic.001G315600 lectin-like receptor kinase, putative, expressed -
17 Sobic.002G424550 - -
18 Sobic.008G012800 GRAS family transcription factor containing protein, expressed -
19 Sobic.001G220600 - -
20 Sobic.010G069700 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1


Gene co-expression network
sample Sobic003G247100 Sobic003G247100 Sobic002G193000 Sobic002G193000 Sobic003G247100--Sobic002G193000 Sobic002G320300 Sobic002G320300 Sobic003G247100--Sobic002G320300 Sobic010G207450 Sobic010G207450 Sobic003G247100--Sobic010G207450 Sobic003G231200 Sobic003G231200 Sobic003G247100--Sobic003G231200 Sobic002G059100 Sobic002G059100 Sobic003G247100--Sobic002G059100 Sobic006G022301 Sobic006G022301 Sobic003G247100--Sobic006G022301 Sobic005G102600 Sobic005G102600 Sobic003G247100--Sobic005G102600 Sobic001G297300 Sobic001G297300 Sobic003G247100--Sobic001G297300 Sobic002G018250 Sobic002G018250 Sobic003G247100--Sobic002G018250 Sobic002G193000--Sobic003G247100 Sobic002G193000--Sobic002G059100 Sobic002G193000--Sobic010G207450 Sobic002G193000--Sobic001G297300 Sobic001G059800 Sobic001G059800 Sobic002G193000--Sobic001G059800 Sobic002G193000--Sobic002G018250 Sobic002G193000--Sobic006G022301 Sobic007G091800 Sobic007G091800 Sobic002G193000--Sobic007G091800 Sobic002G193000--Sobic002G320300 Sobic002G320300--Sobic003G231200 Sobic002G320300--Sobic003G247100 Sobic002G320300--Sobic002G059100 Sobic002G320300--Sobic010G207450 Sobic002G320300--Sobic006G022301 Sobic002G320300--Sobic001G297300 Sobic010G010600 Sobic010G010600 Sobic002G320300--Sobic010G010600 Sobic002G320300--Sobic001G059800 Sobic002G029200 Sobic002G029200 Sobic002G320300--Sobic002G029200 Sobic010G207450--Sobic002G018250 Sobic010G207450--Sobic002G059100 Sobic003G048900 Sobic003G048900 Sobic010G207450--Sobic003G048900 Sobic010G207450--Sobic005G102600 Sobic010G207450--Sobic001G059800 Sobic010G207450--Sobic002G320300 Sobic002G282800 Sobic002G282800 Sobic010G207450--Sobic002G282800 Sobic010G207450--Sobic001G297300 Sobic010G200300 Sobic010G200300 Sobic010G207450--Sobic010G200300 Sobic003G231200--Sobic002G320300 Sobic003G231200--Sobic006G022301 Sobic007G064400 Sobic007G064400 Sobic003G231200--Sobic007G064400 Sobic002G424550 Sobic002G424550 Sobic003G231200--Sobic002G424550 Sobic004G090300 Sobic004G090300 Sobic003G231200--Sobic004G090300 Sobic001G234000 Sobic001G234000 Sobic003G231200--Sobic001G234000 Sobic003G302466 Sobic003G302466 Sobic003G231200--Sobic003G302466 Sobic003G231200--Sobic002G059100 Sobic003G231200--Sobic003G247100 Sobic002G059100--Sobic001G059800 Sobic002G059100--Sobic001G297300 Sobic010G274300 Sobic010G274300 Sobic002G059100--Sobic010G274300 Sobic002G211501 Sobic002G211501 Sobic002G059100--Sobic002G211501 Sobic002G059100--Sobic010G010600 Sobic002G059100--Sobic001G234000 Sobic002G059100--Sobic003G302466 Sobic010G216800 Sobic010G216800 Sobic002G059100--Sobic010G216800 Sobic002G059100--Sobic010G207450 Sobic006G022301--Sobic002G059100 Sobic006G022301--Sobic001G059800 Sobic006G022301--Sobic003G231200 Sobic006G022301--Sobic001G297300 Sobic006G022301--Sobic001G234000 Sobic006G022301--Sobic007G064400 Sobic006G022301--Sobic003G302466 Sobic006G022301--Sobic002G320300 Sobic006G022301--Sobic010G274300 Sobic001G122700 Sobic001G122700 Sobic005G102600--Sobic001G122700 Sobic001G127600 Sobic001G127600 Sobic005G102600--Sobic001G127600 Sobic009G185000 Sobic009G185000 Sobic005G102600--Sobic009G185000 Sobic005G102600--Sobic002G282800 Sobic005G102600--Sobic002G018250 Sobic005G102600--Sobic010G207450 Sobic002G089300 Sobic002G089300 Sobic005G102600--Sobic002G089300 Sobic001G090900 Sobic001G090900 Sobic005G102600--Sobic001G090900 Sobic010G248150 Sobic010G248150 Sobic005G102600--Sobic010G248150 Sobic001G297300--Sobic001G059800 Sobic001G297300--Sobic002G059100 Sobic001G297300--Sobic010G010600 Sobic007G209700 Sobic007G209700 Sobic001G297300--Sobic007G209700 Sobic007G123000 Sobic007G123000 Sobic001G297300--Sobic007G123000 Sobic001G297300--Sobic002G211501 Sobic001G297300--Sobic010G216800 Sobic006G279000 Sobic006G279000 Sobic001G297300--Sobic006G279000 Sobic001G297300--Sobic001G234000 Sobic002G018250--Sobic010G207450 Sobic010G200100 Sobic010G200100 Sobic002G018250--Sobic010G200100 Sobic001G220600 Sobic001G220600 Sobic002G018250--Sobic001G220600 Sobic002G018250--Sobic005G102600 Sobic002G141050 Sobic002G141050 Sobic002G018250--Sobic002G141050 Sobic006G080200 Sobic006G080200 Sobic002G018250--Sobic006G080200 Sobic002G018250--Sobic002G059100 Sobic010G069700 Sobic010G069700 Sobic002G018250--Sobic010G069700 Sobic002G018000 Sobic002G018000 Sobic002G018250--Sobic002G018000
Octagon: transcription factors


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