Gene annotation
Transcriptome id Sobic.008G012800.2
Synonym SCL-3, Sb08g001190, SCL3
Functional annotation GRAS family transcription factor containing protein, expressed
UniProt A0A1B6PAT9
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G50420 : scarecrow-like 3
RAP-DB (Rice) LOC_Os12g04370.1 : GRAS family transcription factor containing protein, expressed
MaizeGDB (Corn) Zm00025a053685
Brachypodium PNT65488
Barley HORVU5Hr1G043310.1
Wheat TraesCS5D02G139500 , TraesCS5A02G135000 , TraesCS5B02G133800
Populus -


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cDNA sequences
Sobic.008G012800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G059100 OsFBX239 - F-box domain containing protein, expressed -
2 Sobic.001G297300 - -
3 Sobic.001G059800 cupin domain containing protein, expressed -
4 Sobic.001G505900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
5 Sobic.002G234100 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
6 Sobic.007G209700 - -
7 Sobic.001G315600 lectin-like receptor kinase, putative, expressed -
8 Sobic.007G064400 glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
9 Sobic.010G010600 - -
10 Sobic.003G302466 - -
11 Sobic.007G127700 DUF581 domain containing protein, expressed -
12 Sobic.001G425900 EDM2, putative, expressed -
13 Sobic.001G234000 expressed protein -
14 Sobic.006G279000 expressed protein -
15 Sobic.007G123000 sex determination protein tasselseed-2, putative, expressed -
16 Sobic.002G211501 - -
17 Sobic.009G051201 - -
18 Sobic.010G207450 - -
19 Sobic.007G069800 expressed protein -
20 Sobic.004G090300 OsFBX46 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic008G012800 Sobic008G012800 Sobic002G059100 Sobic002G059100 Sobic008G012800--Sobic002G059100 Sobic001G297300 Sobic001G297300 Sobic008G012800--Sobic001G297300 Sobic001G059800 Sobic001G059800 Sobic008G012800--Sobic001G059800 Sobic001G505900 Sobic001G505900 Sobic008G012800--Sobic001G505900 Sobic002G234100 Sobic002G234100 Sobic008G012800--Sobic002G234100 Sobic007G209700 Sobic007G209700 Sobic008G012800--Sobic007G209700 Sobic001G315600 Sobic001G315600 Sobic008G012800--Sobic001G315600 Sobic007G064400 Sobic007G064400 Sobic008G012800--Sobic007G064400 Sobic010G010600 Sobic010G010600 Sobic008G012800--Sobic010G010600 Sobic002G059100--Sobic001G059800 Sobic002G059100--Sobic001G297300 Sobic010G274300 Sobic010G274300 Sobic002G059100--Sobic010G274300 Sobic002G211501 Sobic002G211501 Sobic002G059100--Sobic002G211501 Sobic002G059100--Sobic010G010600 Sobic001G234000 Sobic001G234000 Sobic002G059100--Sobic001G234000 Sobic003G302466 Sobic003G302466 Sobic002G059100--Sobic003G302466 Sobic010G216800 Sobic010G216800 Sobic002G059100--Sobic010G216800 Sobic010G207450 Sobic010G207450 Sobic002G059100--Sobic010G207450 Sobic001G297300--Sobic001G059800 Sobic001G297300--Sobic002G059100 Sobic001G297300--Sobic010G010600 Sobic001G297300--Sobic007G209700 Sobic007G123000 Sobic007G123000 Sobic001G297300--Sobic007G123000 Sobic001G297300--Sobic002G211501 Sobic001G297300--Sobic010G216800 Sobic006G279000 Sobic006G279000 Sobic001G297300--Sobic006G279000 Sobic001G297300--Sobic001G234000 Sobic001G059800--Sobic001G297300 Sobic001G059800--Sobic002G059100 Sobic001G059800--Sobic002G211501 Sobic001G059800--Sobic010G216800 Sobic001G059800--Sobic010G010600 Sobic001G059800--Sobic010G274300 Sobic001G059800--Sobic001G234000 Sobic001G059800--Sobic007G123000 Sobic001G059800--Sobic007G209700 Sobic001G313100 Sobic001G313100 Sobic001G505900--Sobic001G313100 Sobic006G155300 Sobic006G155300 Sobic001G505900--Sobic006G155300 Sobic001G469300 Sobic001G469300 Sobic001G505900--Sobic001G469300 Sobic004G322500 Sobic004G322500 Sobic001G505900--Sobic004G322500 Sobic006G210500 Sobic006G210500 Sobic001G505900--Sobic006G210500 Sobic001G505900--Sobic008G012800 Sobic002G416300 Sobic002G416300 Sobic001G505900--Sobic002G416300 Sobic001G505900--Sobic007G064400 Sobic004G065850 Sobic004G065850 Sobic001G505900--Sobic004G065850 Sobic002G234100--Sobic007G209700 Sobic009G051201 Sobic009G051201 Sobic002G234100--Sobic009G051201 Sobic003G378700 Sobic003G378700 Sobic002G234100--Sobic003G378700 Sobic003G307600 Sobic003G307600 Sobic002G234100--Sobic003G307600 Sobic003G213100 Sobic003G213100 Sobic002G234100--Sobic003G213100 Sobic003G225800 Sobic003G225800 Sobic002G234100--Sobic003G225800 Sobic002G217000 Sobic002G217000 Sobic002G234100--Sobic002G217000 Sobic005G197000 Sobic005G197000 Sobic002G234100--Sobic005G197000 Sobic002G101200 Sobic002G101200 Sobic002G234100--Sobic002G101200 Sobic007G209700--Sobic003G307600 Sobic007G209700--Sobic002G234100 Sobic007G209700--Sobic009G051201 Sobic007G209700--Sobic007G123000 Sobic010G181900 Sobic010G181900 Sobic007G209700--Sobic010G181900 Sobic007G209700--Sobic002G101200 Sobic007G209700--Sobic002G217000 Sobic007G209700--Sobic001G297300 Sobic005G089101 Sobic005G089101 Sobic007G209700--Sobic005G089101 Sobic001G485200 Sobic001G485200 Sobic001G315600--Sobic001G485200 Sobic001G315600--Sobic008G012800 Sobic001G315600--Sobic001G505900 Sobic002G370800 Sobic002G370800 Sobic001G315600--Sobic002G370800 Sobic002G420400 Sobic002G420400 Sobic001G315600--Sobic002G420400 Sobic002G097601 Sobic002G097601 Sobic001G315600--Sobic002G097601 Sobic004G339900 Sobic004G339900 Sobic001G315600--Sobic004G339900 Sobic004G071050 Sobic004G071050 Sobic001G315600--Sobic004G071050 Sobic007G041200 Sobic007G041200 Sobic001G315600--Sobic007G041200 Sobic007G064400--Sobic001G234000 Sobic004G187200 Sobic004G187200 Sobic007G064400--Sobic004G187200 Sobic004G090300 Sobic004G090300 Sobic007G064400--Sobic004G090300 Sobic007G064400--Sobic006G279000 Sobic004G090200 Sobic004G090200 Sobic007G064400--Sobic004G090200 Sobic007G064400--Sobic002G059100 Sobic007G156400 Sobic007G156400 Sobic007G064400--Sobic007G156400 Sobic007G064400--Sobic001G297300 Sobic002G147500 Sobic002G147500 Sobic007G064400--Sobic002G147500 Sobic010G010600--Sobic010G216800 Sobic010G010600--Sobic007G123000 Sobic010G010600--Sobic001G297300 Sobic010G209300 Sobic010G209300 Sobic010G010600--Sobic010G209300 Sobic002G088000 Sobic002G088000 Sobic010G010600--Sobic002G088000 Sobic006G271400 Sobic006G271400 Sobic010G010600--Sobic006G271400 Sobic010G010600--Sobic006G279000 Sobic008G001700 Sobic008G001700 Sobic010G010600--Sobic008G001700 Sobic010G010600--Sobic001G059800
Octagon: transcription factors


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