Gene annotation
Transcriptome id Sobic.007G091800.1
Synonym GDU1, Sb07g008530
Functional annotation GDU1, putative, expressed
UniProt C5YJL1
Pfam -
Panther DB PTHR33228 PTHR33228:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31730 : glutamine dumper 1
RAP-DB (Rice) LOC_Os08g15070.1 : GDU1, putative, expressed
MaizeGDB (Corn) Zm00025a051717 , Zm00025a042011
Brachypodium KQK16881 , KQJ95792
Barley HORVU7Hr1G111320.1 , HORVU7Hr1G111350.1 , HORVU1Hr1G003060.2 , HORVU1Hr1G003080.1 , HORVU1Hr1G003060.1 , HORVU1Hr1G003070.1
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.007G091800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G211400 OsFBL33 - F-box domain and LRR containing protein, expressed -
2 Sobic.007G127700 DUF581 domain containing protein, expressed -
3 Sobic.002G104700 expressed protein -
4 Sobic.003G048900 - -
5 Sobic.007G069800 expressed protein -
6 Sobic.003G149600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
7 Sobic.007G064400 glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
8 Sobic.001G297300 - -
9 Sobic.001G112350 - -
10 Sobic.002G193000 EARLY flowering protein, putative, expressed -
11 Sobic.007G032200 - -
12 Sobic.002G234100 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
13 Sobic.008G143400 - -
14 Sobic.002G059100 OsFBX239 - F-box domain containing protein, expressed -
15 Sobic.005G150200 OsFBX1 - F-box domain containing protein, expressed -
16 Sobic.009G051201 - -
17 Sobic.005G052100 expressed protein -
18 Sobic.004G282200 DUF623 domain containing protein, expressed -
19 Sobic.007G209700 - -
20 Sobic.003G247100 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin


Gene co-expression network
sample Sobic007G091800 Sobic007G091800 Sobic002G211400 Sobic002G211400 Sobic007G091800--Sobic002G211400 Sobic007G127700 Sobic007G127700 Sobic007G091800--Sobic007G127700 Sobic002G104700 Sobic002G104700 Sobic007G091800--Sobic002G104700 Sobic003G048900 Sobic003G048900 Sobic007G091800--Sobic003G048900 Sobic007G069800 Sobic007G069800 Sobic007G091800--Sobic007G069800 Sobic003G149600 Sobic003G149600 Sobic007G091800--Sobic003G149600 Sobic007G064400 Sobic007G064400 Sobic007G091800--Sobic007G064400 Sobic001G297300 Sobic001G297300 Sobic007G091800--Sobic001G297300 Sobic001G112350 Sobic001G112350 Sobic007G091800--Sobic001G112350 Sobic002G211400--Sobic007G069800 Sobic002G211400--Sobic001G112350 Sobic005G052100 Sobic005G052100 Sobic002G211400--Sobic005G052100 Sobic002G211400--Sobic007G127700 Sobic008G143400 Sobic008G143400 Sobic002G211400--Sobic008G143400 Sobic002G211400--Sobic007G091800 Sobic001G328350 Sobic001G328350 Sobic002G211400--Sobic001G328350 Sobic004G090200 Sobic004G090200 Sobic002G211400--Sobic004G090200 Sobic002G211400--Sobic007G064400 Sobic007G127700--Sobic007G069800 Sobic009G051201 Sobic009G051201 Sobic007G127700--Sobic009G051201 Sobic007G127700--Sobic005G052100 Sobic002G069800 Sobic002G069800 Sobic007G127700--Sobic002G069800 Sobic003G213100 Sobic003G213100 Sobic007G127700--Sobic003G213100 Sobic007G127700--Sobic001G112350 Sobic009G013200 Sobic009G013200 Sobic007G127700--Sobic009G013200 Sobic005G003100 Sobic005G003100 Sobic007G127700--Sobic005G003100 Sobic001G330600 Sobic001G330600 Sobic007G127700--Sobic001G330600 Sobic005G150200 Sobic005G150200 Sobic002G104700--Sobic005G150200 Sobic008G064100 Sobic008G064100 Sobic002G104700--Sobic008G064100 Sobic006G077800 Sobic006G077800 Sobic002G104700--Sobic006G077800 Sobic004G126900 Sobic004G126900 Sobic002G104700--Sobic004G126900 Sobic008G069200 Sobic008G069200 Sobic002G104700--Sobic008G069200 Sobic007G024000 Sobic007G024000 Sobic002G104700--Sobic007G024000 Sobic010G111400 Sobic010G111400 Sobic002G104700--Sobic010G111400 Sobic004G354500 Sobic004G354500 Sobic002G104700--Sobic004G354500 Sobic004G090500 Sobic004G090500 Sobic002G104700--Sobic004G090500 Sobic010G200300 Sobic010G200300 Sobic003G048900--Sobic010G200300 Sobic002G094700 Sobic002G094700 Sobic003G048900--Sobic002G094700 Sobic001G259200 Sobic001G259200 Sobic003G048900--Sobic001G259200 Sobic010G207450 Sobic010G207450 Sobic003G048900--Sobic010G207450 Sobic007G032200 Sobic007G032200 Sobic003G048900--Sobic007G032200 Sobic001G221750 Sobic001G221750 Sobic003G048900--Sobic001G221750 Sobic007G069750 Sobic007G069750 Sobic003G048900--Sobic007G069750 Sobic001G112300 Sobic001G112300 Sobic003G048900--Sobic001G112300 Sobic003G048900--Sobic007G091800 Sobic007G069800--Sobic005G052100 Sobic007G069800--Sobic001G112350 Sobic007G069800--Sobic007G127700 Sobic007G069800--Sobic002G069800 Sobic007G069800--Sobic008G143400 Sobic007G069800--Sobic005G003100 Sobic007G069800--Sobic009G051201 Sobic007G069800--Sobic003G213100 Sobic007G069800--Sobic009G013200 Sobic003G149600--Sobic009G051201 Sobic003G149600--Sobic007G127700 Sobic007G209700 Sobic007G209700 Sobic003G149600--Sobic007G209700 Sobic002G234100 Sobic002G234100 Sobic003G149600--Sobic002G234100 Sobic003G378700 Sobic003G378700 Sobic003G149600--Sobic003G378700 Sobic010G020100 Sobic010G020100 Sobic003G149600--Sobic010G020100 Sobic002G101200 Sobic002G101200 Sobic003G149600--Sobic002G101200 Sobic007G054700 Sobic007G054700 Sobic003G149600--Sobic007G054700 Sobic002G217000 Sobic002G217000 Sobic003G149600--Sobic002G217000 Sobic001G234000 Sobic001G234000 Sobic007G064400--Sobic001G234000 Sobic004G187200 Sobic004G187200 Sobic007G064400--Sobic004G187200 Sobic004G090300 Sobic004G090300 Sobic007G064400--Sobic004G090300 Sobic006G279000 Sobic006G279000 Sobic007G064400--Sobic006G279000 Sobic007G064400--Sobic004G090200 Sobic002G059100 Sobic002G059100 Sobic007G064400--Sobic002G059100 Sobic007G156400 Sobic007G156400 Sobic007G064400--Sobic007G156400 Sobic007G064400--Sobic001G297300 Sobic002G147500 Sobic002G147500 Sobic007G064400--Sobic002G147500 Sobic001G059800 Sobic001G059800 Sobic001G297300--Sobic001G059800 Sobic001G297300--Sobic002G059100 Sobic010G010600 Sobic010G010600 Sobic001G297300--Sobic010G010600 Sobic001G297300--Sobic007G209700 Sobic007G123000 Sobic007G123000 Sobic001G297300--Sobic007G123000 Sobic002G211501 Sobic002G211501 Sobic001G297300--Sobic002G211501 Sobic010G216800 Sobic010G216800 Sobic001G297300--Sobic010G216800 Sobic001G297300--Sobic006G279000 Sobic001G297300--Sobic001G234000 Sobic001G112350--Sobic008G143400 Sobic001G112350--Sobic007G069800 Sobic001G112350--Sobic005G052100 Sobic001G112350--Sobic002G069800 Sobic001G112350--Sobic007G127700 Sobic001G112350--Sobic001G328350 Sobic001G112350--Sobic004G090200 Sobic001G112350--Sobic005G003100 Sobic001G112350--Sobic009G013200
Octagon: transcription factors


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