Gene annotation
Transcriptome id Sobic.003G365600.1
Synonym Sb03g040730
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt C5XQK5
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF279
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38090 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os05g37060.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a023494 , Zm00025a026745 , Zm00025a039576 , Zm00025a043800 , Zm00025a035798 , Zm00025a037205 , Zm00025a039619 , Zm00025a043782 , Zm00025a026822 , Zm00025a035598
Brachypodium KQK02637 , KQK10627 , KQK10731 , PNT71169
Barley HORVU1Hr1G073300.2 , HORVU1Hr1G073300.3 , HORVU1Hr1G073300.1 , HORVU1Hr1G073940.1 , HORVU1Hr1G073940.2 , HORVU1Hr1G073940.3 , HORVU1Hr1G073940.4 , HORVU1Hr1G073940.5 , HORVU1Hr1G073940.6 , HORVU3Hr1G010600.2 , HORVU3Hr1G010600.3 , HORVU3Hr1G010600.1 , HORVU3Hr1G083740.3 , HORVU3Hr1G083740.2 , HORVU3Hr1G083740.1 , HORVU3Hr1G083740.5 , HORVU3Hr1G083740.4 , HORVU3Hr1G085180.3 , HORVU3Hr1G085180.1 , HORVU0Hr1G018970.2 , HORVU0Hr1G018970.1 , HORVU3Hr1G085140.1
Wheat TraesCS3A02G375500 , TraesCS3D02G056100 , TraesCS3D02G360500 , TraesCS7A02G036100 , TraesCS3B02G068800 , TraesCS1A02G278900 , TraesCS3A02G056000 , TraesCS1D02G278200 , TraesCS3A02G056100 , TraesCS1B02G285000 , TraesCS3D02G368000 , TraesCS3A02G367600 , TraesCS3B02G068900 , TraesCS1B02G287700 , TraesCS1D02G275400 , TraesCS3B02G407700 , TraesCS3D02G056200 , TraesCS7D02G032700 , TraesCS1A02G275800 , TraesCS4A02G452600
Populus -


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cDNA sequences
Sobic.003G365600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G036100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
2 Sobic.002G248100 expressed protein -
3 Sobic.009G255500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
4 Sobic.010G245800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.001G052300 expressed protein -
7 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
8 Sobic.001G077400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
9 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
10 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
11 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
12 Sobic.009G071800 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
13 Sobic.001G077700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
15 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.010G234600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
18 Sobic.002G354900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@gibberellin response modulator protein, putative, expressed -
19 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
20 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic003G365600 Sobic003G365600 Sobic002G036100 Sobic002G036100 Sobic003G365600--Sobic002G036100 Sobic002G248100 Sobic002G248100 Sobic003G365600--Sobic002G248100 Sobic009G255500 Sobic009G255500 Sobic003G365600--Sobic009G255500 Sobic010G245800 Sobic010G245800 Sobic003G365600--Sobic010G245800 Sobic010G246000 Sobic010G246000 Sobic003G365600--Sobic010G246000 Sobic001G052300 Sobic001G052300 Sobic003G365600--Sobic001G052300 Sobic006G165100 Sobic006G165100 Sobic003G365600--Sobic006G165100 Sobic001G077400 Sobic001G077400 Sobic003G365600--Sobic001G077400 Sobic002G294700 Sobic002G294700 Sobic003G365600--Sobic002G294700 Sobic002G036100--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic002G036100--Sobic004G280900 Sobic001G538866 Sobic001G538866 Sobic002G036100--Sobic001G538866 Sobic002G036100--Sobic006G165100 Sobic002G140300 Sobic002G140300 Sobic002G036100--Sobic002G140300 Sobic001G259600 Sobic001G259600 Sobic002G036100--Sobic001G259600 Sobic003G313800 Sobic003G313800 Sobic002G036100--Sobic003G313800 Sobic002G036150 Sobic002G036150 Sobic002G036100--Sobic002G036150 Sobic001G040200 Sobic001G040200 Sobic002G036100--Sobic001G040200 Sobic001G077700 Sobic001G077700 Sobic002G248100--Sobic001G077700 Sobic008G177800 Sobic008G177800 Sobic002G248100--Sobic008G177800 Sobic010G234600 Sobic010G234600 Sobic002G248100--Sobic010G234600 Sobic002G248100--Sobic002G294700 Sobic009G071800 Sobic009G071800 Sobic002G248100--Sobic009G071800 Sobic004G286600 Sobic004G286600 Sobic002G248100--Sobic004G286600 Sobic002G203000 Sobic002G203000 Sobic002G248100--Sobic002G203000 Sobic002G248100--Sobic009G255500 Sobic006G231100 Sobic006G231100 Sobic002G248100--Sobic006G231100 Sobic009G255500--Sobic008G177800 Sobic009G255500--Sobic001G052300 Sobic009G255500--Sobic006G165100 Sobic009G183300 Sobic009G183300 Sobic009G255500--Sobic009G183300 Sobic009G255500--Sobic002G294700 Sobic009G255500--Sobic002G248100 Sobic001G101500 Sobic001G101500 Sobic009G255500--Sobic001G101500 Sobic003G324400 Sobic003G324400 Sobic009G255500--Sobic003G324400 Sobic009G255500--Sobic010G234600 Sobic010G245800--Sobic010G246000 Sobic010G200700 Sobic010G200700 Sobic010G245800--Sobic010G200700 Sobic005G139700 Sobic005G139700 Sobic010G245800--Sobic005G139700 Sobic010G245800--Sobic009G071800 Sobic010G245800--Sobic002G294700 Sobic010G245800--Sobic010G234600 Sobic001G051800 Sobic001G051800 Sobic010G245800--Sobic001G051800 Sobic003G019200 Sobic003G019200 Sobic010G245800--Sobic003G019200 Sobic010G245800--Sobic002G248100 Sobic010G246000--Sobic002G294700 Sobic002G374100 Sobic002G374100 Sobic010G246000--Sobic002G374100 Sobic010G246000--Sobic003G019200 Sobic001G147200 Sobic001G147200 Sobic010G246000--Sobic001G147200 Sobic010G246000--Sobic010G245800 Sobic010G246000--Sobic008G177800 Sobic002G354900 Sobic002G354900 Sobic010G246000--Sobic002G354900 Sobic010G246000--Sobic010G234600 Sobic004G036600 Sobic004G036600 Sobic010G246000--Sobic004G036600 Sobic001G052300--Sobic009G255500 Sobic001G052300--Sobic006G165100 Sobic001G052300--Sobic003G324400 Sobic005G037000 Sobic005G037000 Sobic001G052300--Sobic005G037000 Sobic001G052300--Sobic009G183300 Sobic001G052300--Sobic002G036100 Sobic001G052300--Sobic001G077400 Sobic009G217600 Sobic009G217600 Sobic001G052300--Sobic009G217600 Sobic001G441100 Sobic001G441100 Sobic001G052300--Sobic001G441100 Sobic006G165100--Sobic002G140300 Sobic006G165100--Sobic003G324400 Sobic006G165100--Sobic001G077400 Sobic006G165100--Sobic001G052300 Sobic006G165100--Sobic002G036100 Sobic009G036100 Sobic009G036100 Sobic006G165100--Sobic009G036100 Sobic006G165100--Sobic009G255500 Sobic006G165100--Sobic004G280900 Sobic009G200700 Sobic009G200700 Sobic006G165100--Sobic009G200700 Sobic001G077400--Sobic004G280900 Sobic001G077400--Sobic005G037000 Sobic001G209800 Sobic001G209800 Sobic001G077400--Sobic001G209800 Sobic001G077400--Sobic001G441100 Sobic001G077400--Sobic009G217600 Sobic001G035000 Sobic001G035000 Sobic001G077400--Sobic001G035000 Sobic001G077400--Sobic002G036100 Sobic001G077400--Sobic006G165100 Sobic001G341600 Sobic001G341600 Sobic001G077400--Sobic001G341600 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic002G294700--Sobic006G231100 Sobic002G294700--Sobic002G374100 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic002G294700--Sobic010G246000 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500
Octagon: transcription factors


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