Gene annotation
Transcriptome id Sobic.003G417500.1
Synonym MGP, Sb03g045120
Functional annotation ZOS1-23 - C2H2 zinc finger protein, expressed
UniProt C5XH47
Pfam -
Panther DB PTHR10593 PTHR10593:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03840 : C2H2 and C2HC zinc fingers superfamily protein
RAP-DB (Rice) LOC_Os01g70870.1 : ZOS1-23 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a010195 , Zm00025a036023 , Zm00025a048513 , Zm00025a026121 , Zm00025a023015 , Zm00025a056789 , Zm00025a005649 , Zm00025a014537 , Zm00025a015003 , Zm00025a028450 , Zm00025a021475 , Zm00025a047929 , Zm00025a035820 , Zm00025a006887 , Zm00025a038400 , Zm00025a001203
Brachypodium KQK08378 , KQJ91417 , KQJ91416 , KQK14738 , KQK14739 , KQK14737 , PNT74594 , PNT74593 , PNT74592 , PNT74591 , KQJ96746 , KQJ91415 , KQJ84077 , KQJ84076 , KQK14747 , KQK14746 , KQK14745 , KQK14744 , KQK14743 , KQK14742 , KQK14741 , KQK14740 , KQK03537 , KQK14749 , KQK14748 , KQK11405 , KQK23107 , KQK03154 , KQK00679
Barley HORVU4Hr1G070950.7 , HORVU4Hr1G070950.6 , HORVU4Hr1G070950.4 , HORVU4Hr1G070950.3 , HORVU4Hr1G070950.2 , HORVU4Hr1G070950.1 , HORVU4Hr1G070950.9 , HORVU4Hr1G070950.8 , HORVU3Hr1G049810.5 , HORVU3Hr1G049810.4 , HORVU3Hr1G049810.7 , HORVU3Hr1G049810.6 , HORVU3Hr1G049810.3 , HORVU3Hr1G049810.2 , HORVU4Hr1G070950.13 , HORVU4Hr1G070950.12 , HORVU4Hr1G070950.11 , HORVU4Hr1G070950.10
Wheat TraesCS3B02G237700 , TraesCS2B02G421100 , TraesCS5D02G364900 , TraesCS5D02G364900 , TraesCS4B02G262400 , TraesCS3D02G107300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS3A02G205800 , TraesCS3B02G497200 , TraesCS3A02G105100 , TraesCS3B02G123600 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS3D02G171300 , TraesCS5A02G356100 , TraesCS6D02G116300 , TraesCS4A02G041400 , TraesCS6A02G126000 , TraesCS2A02G403200 , TraesCS2A02G403200 , TraesCS3D02G449900 , TraesCS3A02G170700 , TraesCS6A02G254500 , TraesCS6D02G235800 , TraesCS5B02G358600 , TraesCS6B02G154000 , TraesCS3B02G195900 , TraesCS6D02G235800 , TraesCS4D02G262500 , TraesCS3D02G209800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G071500 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
2 Sobic.010G023066 - -
3 Sobic.004G204300 cyclin, putative, expressed K06627: cyclin-A
4 Sobic.001G216900 - -
5 Sobic.008G186300 receptor-like protein kinase HAIKU2 precursor, putative, expressed -
6 Sobic.005G110487 - -
7 Sobic.002G038733 - -
8 Sobic.010G245900 - -
9 Sobic.006G217950 - -
10 Sobic.004G219700 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.002G172000 similar to Os09g0325700 protein(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
12 Sobic.007G101000 - -
13 Sobic.010G022350 - -
14 Sobic.001G138700 - -
15 Sobic.006G194600 FERONIA receptor-like kinase, putative, expressed -
16 Sobic.004G244300 formin-like protein 3 precursor, putative, expressed -
17 Sobic.008G040900 amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
18 Sobic.006G026400 - -
19 Sobic.003G265701 - -
20 Sobic.004G020500 expressed protein -


Gene co-expression network
sample Sobic003G417500 Sobic003G417500 Sobic005G071500 Sobic005G071500 Sobic003G417500--Sobic005G071500 Sobic010G023066 Sobic010G023066 Sobic003G417500--Sobic010G023066 Sobic004G204300 Sobic004G204300 Sobic003G417500--Sobic004G204300 Sobic001G216900 Sobic001G216900 Sobic003G417500--Sobic001G216900 Sobic008G186300 Sobic008G186300 Sobic003G417500--Sobic008G186300 Sobic005G110487 Sobic005G110487 Sobic003G417500--Sobic005G110487 Sobic002G038733 Sobic002G038733 Sobic003G417500--Sobic002G038733 Sobic010G245900 Sobic010G245900 Sobic003G417500--Sobic010G245900 Sobic006G217950 Sobic006G217950 Sobic003G417500--Sobic006G217950 Sobic005G071500--Sobic003G417500 Sobic005G071500--Sobic010G023066 Sobic005G071500--Sobic004G204300 Sobic005G071500--Sobic005G110487 Sobic005G071500--Sobic006G217950 Sobic007G101000 Sobic007G101000 Sobic005G071500--Sobic007G101000 Sobic006G034650 Sobic006G034650 Sobic005G071500--Sobic006G034650 Sobic006G032200 Sobic006G032200 Sobic005G071500--Sobic006G032200 Sobic005G071500--Sobic010G245900 Sobic010G023066--Sobic005G071500 Sobic010G023066--Sobic003G417500 Sobic010G023066--Sobic004G204300 Sobic004G020500 Sobic004G020500 Sobic010G023066--Sobic004G020500 Sobic001G138700 Sobic001G138700 Sobic010G023066--Sobic001G138700 Sobic010G124800 Sobic010G124800 Sobic010G023066--Sobic010G124800 Sobic010G023066--Sobic001G216900 Sobic010G023066--Sobic006G217950 Sobic010G022350 Sobic010G022350 Sobic010G023066--Sobic010G022350 Sobic004G204300--Sobic001G138700 Sobic004G204300--Sobic010G023066 Sobic004G204300--Sobic005G071500 Sobic004G204300--Sobic003G417500 Sobic004G204300--Sobic006G217950 Sobic009G200750 Sobic009G200750 Sobic004G204300--Sobic009G200750 Sobic004G204300--Sobic010G022350 Sobic002G050450 Sobic002G050450 Sobic004G204300--Sobic002G050450 Sobic004G204300--Sobic001G216900 Sobic009G260800 Sobic009G260800 Sobic001G216900--Sobic009G260800 Sobic005G039350 Sobic005G039350 Sobic001G216900--Sobic005G039350 Sobic001G216900--Sobic010G022350 Sobic008G145400 Sobic008G145400 Sobic001G216900--Sobic008G145400 Sobic005G094266 Sobic005G094266 Sobic001G216900--Sobic005G094266 Sobic010G170800 Sobic010G170800 Sobic001G216900--Sobic010G170800 Sobic003G389601 Sobic003G389601 Sobic001G216900--Sobic003G389601 Sobic004G179100 Sobic004G179100 Sobic001G216900--Sobic004G179100 Sobic001G216900--Sobic003G417500 Sobic008G186300--Sobic002G038733 Sobic008G040900 Sobic008G040900 Sobic008G186300--Sobic008G040900 Sobic008G186300--Sobic003G417500 Sobic009G030200 Sobic009G030200 Sobic008G186300--Sobic009G030200 Sobic004G045800 Sobic004G045800 Sobic008G186300--Sobic004G045800 Sobic003G227600 Sobic003G227600 Sobic008G186300--Sobic003G227600 Sobic004G172100 Sobic004G172100 Sobic008G186300--Sobic004G172100 Sobic006G194600 Sobic006G194600 Sobic008G186300--Sobic006G194600 Sobic006G159800 Sobic006G159800 Sobic008G186300--Sobic006G159800 Sobic005G110487--Sobic006G034650 Sobic005G110487--Sobic007G101000 Sobic005G110487--Sobic004G045800 Sobic002G342100 Sobic002G342100 Sobic005G110487--Sobic002G342100 Sobic009G128300 Sobic009G128300 Sobic005G110487--Sobic009G128300 Sobic006G069200 Sobic006G069200 Sobic005G110487--Sobic006G069200 Sobic002G182800 Sobic002G182800 Sobic005G110487--Sobic002G182800 Sobic003G083000 Sobic003G083000 Sobic005G110487--Sobic003G083000 Sobic001G509400 Sobic001G509400 Sobic005G110487--Sobic001G509400 Sobic002G038733--Sobic008G186300 Sobic002G172000 Sobic002G172000 Sobic002G038733--Sobic002G172000 Sobic002G038733--Sobic008G040900 Sobic001G460300 Sobic001G460300 Sobic002G038733--Sobic001G460300 Sobic002G038733--Sobic006G194600 Sobic005G121200 Sobic005G121200 Sobic002G038733--Sobic005G121200 Sobic003G278700 Sobic003G278700 Sobic002G038733--Sobic003G278700 Sobic004G219700 Sobic004G219700 Sobic002G038733--Sobic004G219700 Sobic005G061000 Sobic005G061000 Sobic002G038733--Sobic005G061000 Sobic010G245900--Sobic003G083000 Sobic003G397400 Sobic003G397400 Sobic010G245900--Sobic003G397400 Sobic007G169600 Sobic007G169600 Sobic010G245900--Sobic007G169600 Sobic007G073750 Sobic007G073750 Sobic010G245900--Sobic007G073750 Sobic007G143100 Sobic007G143100 Sobic010G245900--Sobic007G143100 Sobic005G016900 Sobic005G016900 Sobic010G245900--Sobic005G016900 Sobic007G143200 Sobic007G143200 Sobic010G245900--Sobic007G143200 Sobic009G076700 Sobic009G076700 Sobic010G245900--Sobic009G076700 Sobic010G245900--Sobic004G219700 Sobic006G217950--Sobic001G138700 Sobic006G217950--Sobic005G071500 Sobic006G217950--Sobic004G204300 Sobic006G217950--Sobic009G200750 Sobic002G248201 Sobic002G248201 Sobic006G217950--Sobic002G248201 Sobic002G363466 Sobic002G363466 Sobic006G217950--Sobic002G363466 Sobic006G217950--Sobic003G417500 Sobic001G020900 Sobic001G020900 Sobic006G217950--Sobic001G020900 Sobic006G217950--Sobic004G020500
Octagon: transcription factors


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