Gene annotation
Transcriptome id Sobic.004G036500.2,Sobic.004G036500.1
Synonym Sb04g003140
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Myb-like DNA-binding domain containing protein, putative, expressed
UniProt A0A194YMM8 , A0A1Z5RL76
Pfam PF00249 PF14379
Panther DB PTHR31314 PTHR31314:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13040 : myb-like HTH transcriptional regulator family protein
RAP-DB (Rice) LOC_Os02g04640.1 : Myb-like DNA-binding domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a018399 , Zm00025a018938
Brachypodium PNT67180 , PNT67181 , PNT67179 , PNT67178 , KQJ93270 , PNT65854 , PNT65853 , KQJ96284
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G063201 - -
2 Sobic.004G327100 atATG18b, putative, expressed K17908: WIPI1_2, autophagy-related protein 18
3 Sobic.003G245201 - -
4 Sobic.001G370100 R3H domain containing protein, expressed -
5 Sobic.010G228200 expressed protein -
6 Sobic.005G207550 - -
7 Sobic.005G207600 - -
8 Sobic.010G146350 - -
9 Sobic.001G138500 expressed protein -
10 Sobic.001G190600 pleiotropic drug resistance protein 15, putative, expressed -
11 Sobic.004G122700 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
12 Sobic.008G008701 - -
13 Sobic.006G137900 heavy metal-associated domain containing protein, expressed -
14 Sobic.008G008601 - -
15 Sobic.004G090900 nuclear ribonuclease Z, putative, expressed K00784: ribonuclease Z
16 Sobic.007G027400 MBTB16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
17 Sobic.001G045300 ubiquitin family protein, putative, expressed -
18 Sobic.001G452300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
19 Sobic.002G046500 gibberellin 20 oxidase 1-B, putative, expressed -
20 Sobic.005G014600 OsMan09 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase


Gene co-expression network
sample Sobic004G036500 Sobic004G036500 Sobic002G063201 Sobic002G063201 Sobic004G036500--Sobic002G063201 Sobic004G327100 Sobic004G327100 Sobic004G036500--Sobic004G327100 Sobic003G245201 Sobic003G245201 Sobic004G036500--Sobic003G245201 Sobic001G370100 Sobic001G370100 Sobic004G036500--Sobic001G370100 Sobic010G228200 Sobic010G228200 Sobic004G036500--Sobic010G228200 Sobic005G207550 Sobic005G207550 Sobic004G036500--Sobic005G207550 Sobic005G207600 Sobic005G207600 Sobic004G036500--Sobic005G207600 Sobic010G146350 Sobic010G146350 Sobic004G036500--Sobic010G146350 Sobic001G138500 Sobic001G138500 Sobic004G036500--Sobic001G138500 Sobic003G021401 Sobic003G021401 Sobic002G063201--Sobic003G021401 Sobic003G120050 Sobic003G120050 Sobic002G063201--Sobic003G120050 Sobic003G023100 Sobic003G023100 Sobic002G063201--Sobic003G023100 Sobic002G063201--Sobic010G228200 Sobic002G063201--Sobic010G146350 Sobic002G063201--Sobic005G207600 Sobic001G452300 Sobic001G452300 Sobic002G063201--Sobic001G452300 Sobic002G063201--Sobic004G327100 Sobic008G008601 Sobic008G008601 Sobic002G063201--Sobic008G008601 Sobic004G122700 Sobic004G122700 Sobic004G327100--Sobic004G122700 Sobic004G327100--Sobic005G207550 Sobic006G137900 Sobic006G137900 Sobic004G327100--Sobic006G137900 Sobic008G008701 Sobic008G008701 Sobic004G327100--Sobic008G008701 Sobic004G327100--Sobic001G138500 Sobic004G327100--Sobic008G008601 Sobic001G190600 Sobic001G190600 Sobic004G327100--Sobic001G190600 Sobic004G327100--Sobic001G452300 Sobic004G090900 Sobic004G090900 Sobic004G327100--Sobic004G090900 Sobic005G041700 Sobic005G041700 Sobic003G245201--Sobic005G041700 Sobic001G234700 Sobic001G234700 Sobic003G245201--Sobic001G234700 Sobic001G177500 Sobic001G177500 Sobic001G370100--Sobic001G177500 Sobic001G370100--Sobic004G327100 Sobic007G027400 Sobic007G027400 Sobic001G370100--Sobic007G027400 Sobic001G045300 Sobic001G045300 Sobic001G370100--Sobic001G045300 Sobic001G358101 Sobic001G358101 Sobic001G370100--Sobic001G358101 Sobic002G046500 Sobic002G046500 Sobic001G370100--Sobic002G046500 Sobic003G190701 Sobic003G190701 Sobic001G370100--Sobic003G190701 Sobic010G140800 Sobic010G140800 Sobic001G370100--Sobic010G140800 Sobic004G162800 Sobic004G162800 Sobic001G370100--Sobic004G162800 Sobic010G228200--Sobic010G146350 Sobic010G228200--Sobic005G207600 Sobic010G228200--Sobic001G190600 Sobic010G228200--Sobic005G207550 Sobic007G120600 Sobic007G120600 Sobic010G228200--Sobic007G120600 Sobic001G060001 Sobic001G060001 Sobic010G228200--Sobic001G060001 Sobic010G228200--Sobic006G137900 Sobic010G228200--Sobic001G138500 Sobic004G052700 Sobic004G052700 Sobic010G228200--Sobic004G052700 Sobic005G207550--Sobic001G138500 Sobic005G207550--Sobic001G190600 Sobic005G207550--Sobic008G008701 Sobic005G207550--Sobic004G122700 Sobic005G207550--Sobic006G137900 Sobic005G207550--Sobic001G045300 Sobic005G207550--Sobic004G090900 Sobic005G207550--Sobic007G027400 Sobic005G207550--Sobic005G207600 Sobic005G207600--Sobic010G146350 Sobic005G207600--Sobic010G228200 Sobic005G207600--Sobic001G190600 Sobic005G207600--Sobic005G207550 Sobic005G207600--Sobic001G060001 Sobic005G207600--Sobic007G120600 Sobic005G207600--Sobic006G137900 Sobic005G207600--Sobic001G138500 Sobic005G207600--Sobic004G052700 Sobic010G146350--Sobic005G207600 Sobic010G146350--Sobic010G228200 Sobic010G146350--Sobic007G120600 Sobic010G146350--Sobic001G060001 Sobic010G146350--Sobic001G190600 Sobic010G146350--Sobic005G207550 Sobic010G146350--Sobic004G052700 Sobic008G096401 Sobic008G096401 Sobic010G146350--Sobic008G096401 Sobic010G146350--Sobic006G137900 Sobic001G138500--Sobic005G207550 Sobic001G138500--Sobic008G008701 Sobic001G138500--Sobic004G122700 Sobic001G138500--Sobic001G190600 Sobic001G138500--Sobic006G137900 Sobic001G138500--Sobic004G090900 Sobic001G138500--Sobic001G045300 Sobic001G138500--Sobic007G027400 Sobic001G138500--Sobic002G046500
Octagon: transcription factors


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