Gene annotation
Transcriptome id Sobic.004G039800.1
Synonym Sb04g003430
Functional annotation cyclin-related protein, putative, expressed
UniProt C5XUM7
Pfam -
Panther DB PTHR12444 PTHR12444:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41830 : Uncharacterized protein
RAP-DB (Rice) LOC_Os07g10550.1 : cyclin-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a018962
Brachypodium PNT65864 , PNT65863 , PNT65862
Barley HORVU6Hr1G020790.20 , HORVU6Hr1G020790.18 , HORVU6Hr1G020790.19 , HORVU6Hr1G020790.14 , HORVU6Hr1G020790.15 , HORVU6Hr1G020790.16 , HORVU6Hr1G020790.10 , HORVU6Hr1G020790.11 , HORVU6Hr1G020790.12 , HORVU6Hr1G020790.13 , HORVU6Hr1G020790.21 , HORVU6Hr1G020790.22 , HORVU6Hr1G020790.25 , HORVU6Hr1G020790.27 , HORVU6Hr1G020790.26 , HORVU6Hr1G020790.29 , HORVU6Hr1G020790.28 , HORVU6Hr1G020790.34 , HORVU6Hr1G020790.32 , HORVU6Hr1G020790.33 , HORVU6Hr1G020790.30 , HORVU6Hr1G020790.31 , HORVU6Hr1G020790.23 , HORVU6Hr1G020790.6 , HORVU6Hr1G020790.7 , HORVU6Hr1G020790.4 , HORVU6Hr1G020790.5 , HORVU6Hr1G020790.2 , HORVU6Hr1G020790.3 , HORVU6Hr1G020790.1 , HORVU6Hr1G020790.8 , HORVU6Hr1G020790.9
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G109900 glycosyl hydrolase, putative, expressed K01183: chitinase
2 Sobic.001G315300 chloroplast 30S ribosomal protein S2, putative, expressed -
3 Sobic.010G157600 expressed protein -
4 Sobic.003G023901 - -
5 Sobic.001G184950 - -
6 Sobic.002G286500 carrier, putative, expressed -
7 Sobic.007G223801 - -
8 Sobic.001G074900 lectin-like receptor kinase, putative, expressed -
9 Sobic.009G258000 S-locus lectin protein kinase family protein, putative, expressed -
10 Sobic.010G172633 - -
11 Sobic.002G359500 - -
12 Sobic.006G171801 - -
13 Sobic.001G248900 exocyst complex component 6, putative, expressed -
14 Sobic.001G072550 - -
15 Sobic.001G526050 - -
16 Sobic.008G124766 - -
17 Sobic.004G216650 - -
18 Sobic.001G060800 cell division control protein 2 homolog 3, putative, expressed K08818: cell division cycle 2-like
19 Sobic.006G227050 - -
20 Sobic.003G432400 NB-ARC domain containing protein, expressed -


Gene co-expression network
sample Sobic004G039800 Sobic004G039800 Sobic002G109900 Sobic002G109900 Sobic004G039800--Sobic002G109900 Sobic001G315300 Sobic001G315300 Sobic004G039800--Sobic001G315300 Sobic010G157600 Sobic010G157600 Sobic004G039800--Sobic010G157600 Sobic003G023901 Sobic003G023901 Sobic004G039800--Sobic003G023901 Sobic001G184950 Sobic001G184950 Sobic004G039800--Sobic001G184950 Sobic002G286500 Sobic002G286500 Sobic004G039800--Sobic002G286500 Sobic007G223801 Sobic007G223801 Sobic004G039800--Sobic007G223801 Sobic001G074900 Sobic001G074900 Sobic004G039800--Sobic001G074900 Sobic009G258000 Sobic009G258000 Sobic004G039800--Sobic009G258000 Sobic002G109900--Sobic001G315300 Sobic002G109900--Sobic003G023901 Sobic002G109900--Sobic002G286500 Sobic002G109900--Sobic007G223801 Sobic002G109900--Sobic010G157600 Sobic002G109900--Sobic001G074900 Sobic002G109900--Sobic004G039800 Sobic002G109900--Sobic001G184950 Sobic002G109900--Sobic009G258000 Sobic010G172633 Sobic010G172633 Sobic001G315300--Sobic010G172633 Sobic001G315300--Sobic002G109900 Sobic001G143850 Sobic001G143850 Sobic001G315300--Sobic001G143850 Sobic004G216650 Sobic004G216650 Sobic001G315300--Sobic004G216650 Sobic003G147800 Sobic003G147800 Sobic001G315300--Sobic003G147800 Sobic001G315300--Sobic001G184950 Sobic002G136500 Sobic002G136500 Sobic001G315300--Sobic002G136500 Sobic001G315300--Sobic001G074900 Sobic001G315300--Sobic002G286500 Sobic006G171801 Sobic006G171801 Sobic010G157600--Sobic006G171801 Sobic004G194950 Sobic004G194950 Sobic010G157600--Sobic004G194950 Sobic009G184450 Sobic009G184450 Sobic010G157600--Sobic009G184450 Sobic002G232100 Sobic002G232100 Sobic010G157600--Sobic002G232100 Sobic010G028366 Sobic010G028366 Sobic010G157600--Sobic010G028366 Sobic010G157600--Sobic007G223801 Sobic010G157600--Sobic002G109900 Sobic003G350850 Sobic003G350850 Sobic010G157600--Sobic003G350850 Sobic010G157600--Sobic002G136500 Sobic003G023901--Sobic007G223801 Sobic003G023901--Sobic002G109900 Sobic003G023901--Sobic002G286500 Sobic001G526050 Sobic001G526050 Sobic003G023901--Sobic001G526050 Sobic003G023901--Sobic003G350850 Sobic003G023901--Sobic001G315300 Sobic001G248900 Sobic001G248900 Sobic003G023901--Sobic001G248900 Sobic003G023901--Sobic010G157600 Sobic003G023901--Sobic006G171801 Sobic001G184950--Sobic010G172633 Sobic001G184950--Sobic001G315300 Sobic001G035700 Sobic001G035700 Sobic001G184950--Sobic001G035700 Sobic001G184950--Sobic002G109900 Sobic003G081200 Sobic003G081200 Sobic001G184950--Sobic003G081200 Sobic001G060800 Sobic001G060800 Sobic001G184950--Sobic001G060800 Sobic001G184950--Sobic001G143850 Sobic001G184950--Sobic004G039800 Sobic009G147450 Sobic009G147450 Sobic001G184950--Sobic009G147450 Sobic002G286500--Sobic006G171801 Sobic002G286500--Sobic001G074900 Sobic002G286500--Sobic002G109900 Sobic002G286500--Sobic007G223801 Sobic002G286500--Sobic010G157600 Sobic002G286500--Sobic001G248900 Sobic002G286500--Sobic001G315300 Sobic002G286500--Sobic010G028366 Sobic002G286500--Sobic003G023901 Sobic007G223801--Sobic003G023901 Sobic007G223801--Sobic003G350850 Sobic007G223801--Sobic010G157600 Sobic007G223801--Sobic002G109900 Sobic007G223801--Sobic002G286500 Sobic007G223801--Sobic006G171801 Sobic007G223801--Sobic004G194950 Sobic007G223801--Sobic002G232100 Sobic007G223801--Sobic001G248900 Sobic001G074900--Sobic002G286500 Sobic001G074900--Sobic003G147800 Sobic001G074900--Sobic002G109900 Sobic010G226100 Sobic010G226100 Sobic001G074900--Sobic010G226100 Sobic001G074900--Sobic001G315300 Sobic001G074900--Sobic010G028366 Sobic001G074900--Sobic006G171801 Sobic002G246100 Sobic002G246100 Sobic001G074900--Sobic002G246100 Sobic004G282966 Sobic004G282966 Sobic001G074900--Sobic004G282966 Sobic003G432400 Sobic003G432400 Sobic009G258000--Sobic003G432400 Sobic002G359500 Sobic002G359500 Sobic009G258000--Sobic002G359500 Sobic009G258000--Sobic010G226100 Sobic007G043750 Sobic007G043750 Sobic009G258000--Sobic007G043750 Sobic003G198850 Sobic003G198850 Sobic009G258000--Sobic003G198850 Sobic003G257650 Sobic003G257650 Sobic009G258000--Sobic003G257650 Sobic004G115950 Sobic004G115950 Sobic009G258000--Sobic004G115950 Sobic009G258000--Sobic002G109900 Sobic003G394150 Sobic003G394150 Sobic009G258000--Sobic003G394150
Octagon: transcription factors


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