Gene annotation
Transcriptome id Sobic.007G223801.1
Synonym -
Functional annotation -
UniProt A0A1Z5RBD1
Pfam PF01210
Panther DB PTHR11728 PTHR11728:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0009331glycerol-3-phosphate dehydrogenase complex GO:0006072glycerol-3-phosphate metabolic process GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity


Orthologs (automatic annotation)
TAIR AT2G40690 : NAD-dependent glycerol-3-phosphate dehydrogenase family protein
RAP-DB (Rice) LOC_Os06g09170.2 : zinc ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a045439
Brachypodium KQK20312 , KQK20311
Barley HORVU4Hr1G075040.8 , HORVU4Hr1G075040.9 , HORVU4Hr1G075040.3 , HORVU4Hr1G075040.1 , HORVU4Hr1G075040.6 , HORVU4Hr1G075040.7 , HORVU4Hr1G075040.4 , HORVU4Hr1G075040.29 , HORVU4Hr1G075040.28 , HORVU4Hr1G075040.25 , HORVU4Hr1G075040.24 , HORVU4Hr1G075040.27 , HORVU4Hr1G075040.26 , HORVU4Hr1G075040.21 , HORVU4Hr1G075040.20 , HORVU4Hr1G075040.23 , HORVU4Hr1G075040.22 , HORVU4Hr1G075040.18 , HORVU4Hr1G075040.19 , HORVU4Hr1G075040.10 , HORVU4Hr1G075040.11 , HORVU4Hr1G075040.12 , HORVU4Hr1G075040.13 , HORVU4Hr1G075040.14 , HORVU4Hr1G075040.15 , HORVU4Hr1G075040.17
Wheat TraesCS4B02G286700 , TraesCS4B02G286700 , TraesCS4D02G285400 , TraesCS4A02G017300 , TraesCS4A02G017300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G023901 - -
2 Sobic.003G350850 - -
3 Sobic.010G157600 expressed protein -
4 Sobic.002G109900 glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.002G286500 carrier, putative, expressed -
6 Sobic.006G171801 - -
7 Sobic.004G194950 - -
8 Sobic.002G232100 purine permease, putative, expressed -
9 Sobic.001G248900 exocyst complex component 6, putative, expressed -
10 Sobic.007G206900 - -
11 Sobic.001G315300 chloroplast 30S ribosomal protein S2, putative, expressed -
12 Sobic.001G526050 - -
13 Sobic.004G039800 cyclin-related protein, putative, expressed -
14 Sobic.006G227050 - -
15 Sobic.008G130500 TKL_IRAK_DUF26-la.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.010G028366 - -
17 Sobic.001G074900 lectin-like receptor kinase, putative, expressed -
18 Sobic.010G244150 - -
19 Sobic.001G072550 - -
20 Sobic.002G136500 BRCA1 C Terminus domain containing protein, expressed -


Gene co-expression network
sample Sobic007G223801 Sobic007G223801 Sobic003G023901 Sobic003G023901 Sobic007G223801--Sobic003G023901 Sobic003G350850 Sobic003G350850 Sobic007G223801--Sobic003G350850 Sobic010G157600 Sobic010G157600 Sobic007G223801--Sobic010G157600 Sobic002G109900 Sobic002G109900 Sobic007G223801--Sobic002G109900 Sobic002G286500 Sobic002G286500 Sobic007G223801--Sobic002G286500 Sobic006G171801 Sobic006G171801 Sobic007G223801--Sobic006G171801 Sobic004G194950 Sobic004G194950 Sobic007G223801--Sobic004G194950 Sobic002G232100 Sobic002G232100 Sobic007G223801--Sobic002G232100 Sobic001G248900 Sobic001G248900 Sobic007G223801--Sobic001G248900 Sobic003G023901--Sobic007G223801 Sobic003G023901--Sobic002G109900 Sobic003G023901--Sobic002G286500 Sobic001G526050 Sobic001G526050 Sobic003G023901--Sobic001G526050 Sobic003G023901--Sobic003G350850 Sobic001G315300 Sobic001G315300 Sobic003G023901--Sobic001G315300 Sobic003G023901--Sobic001G248900 Sobic003G023901--Sobic010G157600 Sobic003G023901--Sobic006G171801 Sobic003G350850--Sobic007G223801 Sobic003G350850--Sobic002G232100 Sobic003G350850--Sobic004G194950 Sobic003G350850--Sobic010G157600 Sobic003G350850--Sobic003G023901 Sobic003G350850--Sobic006G171801 Sobic002G143600 Sobic002G143600 Sobic003G350850--Sobic002G143600 Sobic010G028366 Sobic010G028366 Sobic003G350850--Sobic010G028366 Sobic003G350850--Sobic002G286500 Sobic010G157600--Sobic006G171801 Sobic010G157600--Sobic004G194950 Sobic009G184450 Sobic009G184450 Sobic010G157600--Sobic009G184450 Sobic010G157600--Sobic002G232100 Sobic010G157600--Sobic010G028366 Sobic010G157600--Sobic007G223801 Sobic010G157600--Sobic002G109900 Sobic010G157600--Sobic003G350850 Sobic002G136500 Sobic002G136500 Sobic010G157600--Sobic002G136500 Sobic002G109900--Sobic001G315300 Sobic002G109900--Sobic003G023901 Sobic002G109900--Sobic002G286500 Sobic002G109900--Sobic007G223801 Sobic002G109900--Sobic010G157600 Sobic001G074900 Sobic001G074900 Sobic002G109900--Sobic001G074900 Sobic004G039800 Sobic004G039800 Sobic002G109900--Sobic004G039800 Sobic001G184950 Sobic001G184950 Sobic002G109900--Sobic001G184950 Sobic009G258000 Sobic009G258000 Sobic002G109900--Sobic009G258000 Sobic002G286500--Sobic006G171801 Sobic002G286500--Sobic001G074900 Sobic002G286500--Sobic002G109900 Sobic002G286500--Sobic007G223801 Sobic002G286500--Sobic010G157600 Sobic002G286500--Sobic001G248900 Sobic002G286500--Sobic001G315300 Sobic002G286500--Sobic010G028366 Sobic002G286500--Sobic003G023901 Sobic006G171801--Sobic010G157600 Sobic006G171801--Sobic002G286500 Sobic003G404050 Sobic003G404050 Sobic006G171801--Sobic003G404050 Sobic006G171801--Sobic010G028366 Sobic010G123650 Sobic010G123650 Sobic006G171801--Sobic010G123650 Sobic001G087850 Sobic001G087850 Sobic006G171801--Sobic001G087850 Sobic001G436450 Sobic001G436450 Sobic006G171801--Sobic001G436450 Sobic006G171801--Sobic009G184450 Sobic006G171801--Sobic002G136500 Sobic004G194950--Sobic002G232100 Sobic004G194950--Sobic010G157600 Sobic004G194950--Sobic003G350850 Sobic004G194950--Sobic002G143600 Sobic004G194950--Sobic009G184450 Sobic004G194950--Sobic006G171801 Sobic004G194950--Sobic007G223801 Sobic004G194950--Sobic010G028366 Sobic001G258700 Sobic001G258700 Sobic004G194950--Sobic001G258700 Sobic002G232100--Sobic004G194950 Sobic002G232100--Sobic003G350850 Sobic002G232100--Sobic010G157600 Sobic002G232100--Sobic002G143600 Sobic002G232100--Sobic007G223801 Sobic002G232100--Sobic006G171801 Sobic002G232100--Sobic009G184450 Sobic002G232100--Sobic010G028366 Sobic002G232100--Sobic001G258700 Sobic001G248900--Sobic002G286500 Sobic001G248900--Sobic002G109900 Sobic001G248900--Sobic003G023901 Sobic001G248900--Sobic001G074900 Sobic006G035200 Sobic006G035200 Sobic001G248900--Sobic006G035200 Sobic001G248900--Sobic001G315300 Sobic001G248900--Sobic007G223801 Sobic002G157050 Sobic002G157050 Sobic001G248900--Sobic002G157050 Sobic001G248900--Sobic001G526050
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.