Gene annotation
Transcriptome id Sobic.001G072550.1
Synonym -
Functional annotation -
UniProt A0A1Z5S4R4
Pfam -
Panther DB PTHR35828 PTHR35828:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g56450.1 : OsFBX111 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G109900 glycosyl hydrolase, putative, expressed K01183: chitinase
2 Sobic.001G060800 cell division control protein 2 homolog 3, putative, expressed K08818: cell division cycle 2-like
3 Sobic.001G315300 chloroplast 30S ribosomal protein S2, putative, expressed -
4 Sobic.001G526050 - -
5 Sobic.001G343700 SWIM zinc finger family protein, putative, expressed -
6 Sobic.003G023901 - -
7 Sobic.003G081200 expressed protein -
8 Sobic.010G172633 - -
9 Sobic.001G184950 - -
10 Sobic.001G248900 exocyst complex component 6, putative, expressed -
11 Sobic.007G223801 - -
12 Sobic.002G286500 carrier, putative, expressed -
13 Sobic.004G039800 cyclin-related protein, putative, expressed -
14 Sobic.006G249900 MBTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.009G147450 - -
16 Sobic.001G035700 - -
17 Sobic.002G292000 - -
18 Sobic.001G074900 lectin-like receptor kinase, putative, expressed -
19 Sobic.006G035200 - -
20 Sobic.004G351000 - -


Gene co-expression network
sample Sobic001G072550 Sobic001G072550 Sobic002G109900 Sobic002G109900 Sobic001G072550--Sobic002G109900 Sobic001G060800 Sobic001G060800 Sobic001G072550--Sobic001G060800 Sobic001G315300 Sobic001G315300 Sobic001G072550--Sobic001G315300 Sobic001G526050 Sobic001G526050 Sobic001G072550--Sobic001G526050 Sobic001G343700 Sobic001G343700 Sobic001G072550--Sobic001G343700 Sobic003G023901 Sobic003G023901 Sobic001G072550--Sobic003G023901 Sobic003G081200 Sobic003G081200 Sobic001G072550--Sobic003G081200 Sobic010G172633 Sobic010G172633 Sobic001G072550--Sobic010G172633 Sobic001G184950 Sobic001G184950 Sobic001G072550--Sobic001G184950 Sobic002G109900--Sobic001G315300 Sobic002G109900--Sobic003G023901 Sobic002G286500 Sobic002G286500 Sobic002G109900--Sobic002G286500 Sobic007G223801 Sobic007G223801 Sobic002G109900--Sobic007G223801 Sobic010G157600 Sobic010G157600 Sobic002G109900--Sobic010G157600 Sobic001G074900 Sobic001G074900 Sobic002G109900--Sobic001G074900 Sobic004G039800 Sobic004G039800 Sobic002G109900--Sobic004G039800 Sobic002G109900--Sobic001G184950 Sobic009G258000 Sobic009G258000 Sobic002G109900--Sobic009G258000 Sobic001G060800--Sobic002G109900 Sobic001G060800--Sobic001G315300 Sobic001G060800--Sobic010G172633 Sobic001G060800--Sobic001G072550 Sobic001G060800--Sobic001G184950 Sobic002G292000 Sobic002G292000 Sobic001G060800--Sobic002G292000 Sobic003G413550 Sobic003G413550 Sobic001G060800--Sobic003G413550 Sobic001G035700 Sobic001G035700 Sobic001G060800--Sobic001G035700 Sobic004G298250 Sobic004G298250 Sobic001G060800--Sobic004G298250 Sobic001G315300--Sobic010G172633 Sobic001G315300--Sobic002G109900 Sobic001G143850 Sobic001G143850 Sobic001G315300--Sobic001G143850 Sobic004G216650 Sobic004G216650 Sobic001G315300--Sobic004G216650 Sobic003G147800 Sobic003G147800 Sobic001G315300--Sobic003G147800 Sobic001G315300--Sobic001G184950 Sobic002G136500 Sobic002G136500 Sobic001G315300--Sobic002G136500 Sobic001G315300--Sobic001G074900 Sobic001G315300--Sobic002G286500 Sobic001G526050--Sobic001G343700 Sobic001G526050--Sobic003G023901 Sobic001G526050--Sobic003G081200 Sobic001G526050--Sobic001G315300 Sobic009G147450 Sobic009G147450 Sobic001G526050--Sobic009G147450 Sobic001G526050--Sobic002G109900 Sobic004G351000 Sobic004G351000 Sobic001G526050--Sobic004G351000 Sobic002G232300 Sobic002G232300 Sobic001G526050--Sobic002G232300 Sobic001G526050--Sobic001G072550 Sobic001G343700--Sobic003G081200 Sobic001G343700--Sobic009G147450 Sobic001G343700--Sobic002G232300 Sobic004G230000 Sobic004G230000 Sobic001G343700--Sobic004G230000 Sobic003G023901--Sobic007G223801 Sobic003G023901--Sobic002G109900 Sobic003G023901--Sobic002G286500 Sobic003G023901--Sobic001G526050 Sobic003G350850 Sobic003G350850 Sobic003G023901--Sobic003G350850 Sobic003G023901--Sobic001G315300 Sobic001G248900 Sobic001G248900 Sobic003G023901--Sobic001G248900 Sobic003G023901--Sobic010G157600 Sobic006G171801 Sobic006G171801 Sobic003G023901--Sobic006G171801 Sobic003G081200--Sobic009G147450 Sobic003G081200--Sobic001G343700 Sobic004G024350 Sobic004G024350 Sobic003G081200--Sobic004G024350 Sobic003G081200--Sobic004G230000 Sobic010G172633--Sobic001G315300 Sobic010G172633--Sobic001G143850 Sobic010G172633--Sobic001G035700 Sobic001G505066 Sobic001G505066 Sobic010G172633--Sobic001G505066 Sobic010G172633--Sobic001G184950 Sobic010G172633--Sobic009G147450 Sobic010G172633--Sobic003G147800 Sobic003G132200 Sobic003G132200 Sobic010G172633--Sobic003G132200 Sobic010G172633--Sobic002G109900 Sobic001G184950--Sobic010G172633 Sobic001G184950--Sobic001G315300 Sobic001G184950--Sobic001G035700 Sobic001G184950--Sobic002G109900 Sobic001G184950--Sobic003G081200 Sobic001G184950--Sobic001G060800 Sobic001G184950--Sobic001G143850 Sobic001G184950--Sobic004G039800 Sobic001G184950--Sobic009G147450
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.