Gene annotation
Transcriptome id Sobic.002G109900.1
Synonym CHIA, ATCHIA, Sb02g009380
Functional annotation glycosyl hydrolase, putative, expressed
UniProt C5X474
Pfam PF00704
Panther DB PTHR11177 PTHR11177:SF179
NCBI CDD -
KEGG Orthology K01183; chitinase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G24090 : chitinase A
RAP-DB (Rice) LOC_Os07g19040.1 : glycosyl hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a045635 , Zm00025a026760
Brachypodium KQK20132
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G315300 chloroplast 30S ribosomal protein S2, putative, expressed -
2 Sobic.003G023901 - -
3 Sobic.002G286500 carrier, putative, expressed -
4 Sobic.007G223801 - -
5 Sobic.010G157600 expressed protein -
6 Sobic.001G074900 lectin-like receptor kinase, putative, expressed -
7 Sobic.004G039800 cyclin-related protein, putative, expressed -
8 Sobic.001G184950 - -
9 Sobic.009G258000 S-locus lectin protein kinase family protein, putative, expressed -
10 Sobic.010G172633 - -
11 Sobic.001G248900 exocyst complex component 6, putative, expressed -
12 Sobic.006G171801 - -
13 Sobic.002G359500 - -
14 Sobic.003G147800 expressed protein -
15 Sobic.001G060800 cell division control protein 2 homolog 3, putative, expressed K08818: cell division cycle 2-like
16 Sobic.004G216650 - -
17 Sobic.001G072550 - -
18 Sobic.006G227050 - -
19 Sobic.001G526050 - -
20 Sobic.002G136500 BRCA1 C Terminus domain containing protein, expressed -


Gene co-expression network
sample Sobic002G109900 Sobic002G109900 Sobic001G315300 Sobic001G315300 Sobic002G109900--Sobic001G315300 Sobic003G023901 Sobic003G023901 Sobic002G109900--Sobic003G023901 Sobic002G286500 Sobic002G286500 Sobic002G109900--Sobic002G286500 Sobic007G223801 Sobic007G223801 Sobic002G109900--Sobic007G223801 Sobic010G157600 Sobic010G157600 Sobic002G109900--Sobic010G157600 Sobic001G074900 Sobic001G074900 Sobic002G109900--Sobic001G074900 Sobic004G039800 Sobic004G039800 Sobic002G109900--Sobic004G039800 Sobic001G184950 Sobic001G184950 Sobic002G109900--Sobic001G184950 Sobic009G258000 Sobic009G258000 Sobic002G109900--Sobic009G258000 Sobic010G172633 Sobic010G172633 Sobic001G315300--Sobic010G172633 Sobic001G315300--Sobic002G109900 Sobic001G143850 Sobic001G143850 Sobic001G315300--Sobic001G143850 Sobic004G216650 Sobic004G216650 Sobic001G315300--Sobic004G216650 Sobic003G147800 Sobic003G147800 Sobic001G315300--Sobic003G147800 Sobic001G315300--Sobic001G184950 Sobic002G136500 Sobic002G136500 Sobic001G315300--Sobic002G136500 Sobic001G315300--Sobic001G074900 Sobic001G315300--Sobic002G286500 Sobic003G023901--Sobic007G223801 Sobic003G023901--Sobic002G109900 Sobic003G023901--Sobic002G286500 Sobic001G526050 Sobic001G526050 Sobic003G023901--Sobic001G526050 Sobic003G350850 Sobic003G350850 Sobic003G023901--Sobic003G350850 Sobic003G023901--Sobic001G315300 Sobic001G248900 Sobic001G248900 Sobic003G023901--Sobic001G248900 Sobic003G023901--Sobic010G157600 Sobic006G171801 Sobic006G171801 Sobic003G023901--Sobic006G171801 Sobic002G286500--Sobic006G171801 Sobic002G286500--Sobic001G074900 Sobic002G286500--Sobic002G109900 Sobic002G286500--Sobic007G223801 Sobic002G286500--Sobic010G157600 Sobic002G286500--Sobic001G248900 Sobic002G286500--Sobic001G315300 Sobic010G028366 Sobic010G028366 Sobic002G286500--Sobic010G028366 Sobic002G286500--Sobic003G023901 Sobic007G223801--Sobic003G023901 Sobic007G223801--Sobic003G350850 Sobic007G223801--Sobic010G157600 Sobic007G223801--Sobic002G109900 Sobic007G223801--Sobic002G286500 Sobic007G223801--Sobic006G171801 Sobic004G194950 Sobic004G194950 Sobic007G223801--Sobic004G194950 Sobic002G232100 Sobic002G232100 Sobic007G223801--Sobic002G232100 Sobic007G223801--Sobic001G248900 Sobic010G157600--Sobic006G171801 Sobic010G157600--Sobic004G194950 Sobic009G184450 Sobic009G184450 Sobic010G157600--Sobic009G184450 Sobic010G157600--Sobic002G232100 Sobic010G157600--Sobic010G028366 Sobic010G157600--Sobic007G223801 Sobic010G157600--Sobic002G109900 Sobic010G157600--Sobic003G350850 Sobic010G157600--Sobic002G136500 Sobic001G074900--Sobic002G286500 Sobic001G074900--Sobic003G147800 Sobic001G074900--Sobic002G109900 Sobic010G226100 Sobic010G226100 Sobic001G074900--Sobic010G226100 Sobic001G074900--Sobic001G315300 Sobic001G074900--Sobic010G028366 Sobic001G074900--Sobic006G171801 Sobic002G246100 Sobic002G246100 Sobic001G074900--Sobic002G246100 Sobic004G282966 Sobic004G282966 Sobic001G074900--Sobic004G282966 Sobic004G039800--Sobic002G109900 Sobic004G039800--Sobic001G315300 Sobic004G039800--Sobic010G157600 Sobic004G039800--Sobic003G023901 Sobic004G039800--Sobic001G184950 Sobic004G039800--Sobic002G286500 Sobic004G039800--Sobic007G223801 Sobic004G039800--Sobic001G074900 Sobic004G039800--Sobic009G258000 Sobic001G184950--Sobic010G172633 Sobic001G184950--Sobic001G315300 Sobic001G035700 Sobic001G035700 Sobic001G184950--Sobic001G035700 Sobic001G184950--Sobic002G109900 Sobic003G081200 Sobic003G081200 Sobic001G184950--Sobic003G081200 Sobic001G060800 Sobic001G060800 Sobic001G184950--Sobic001G060800 Sobic001G184950--Sobic001G143850 Sobic001G184950--Sobic004G039800 Sobic009G147450 Sobic009G147450 Sobic001G184950--Sobic009G147450 Sobic003G432400 Sobic003G432400 Sobic009G258000--Sobic003G432400 Sobic002G359500 Sobic002G359500 Sobic009G258000--Sobic002G359500 Sobic009G258000--Sobic010G226100 Sobic007G043750 Sobic007G043750 Sobic009G258000--Sobic007G043750 Sobic003G198850 Sobic003G198850 Sobic009G258000--Sobic003G198850 Sobic003G257650 Sobic003G257650 Sobic009G258000--Sobic003G257650 Sobic004G115950 Sobic004G115950 Sobic009G258000--Sobic004G115950 Sobic009G258000--Sobic002G109900 Sobic003G394150 Sobic003G394150 Sobic009G258000--Sobic003G394150
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.