Gene annotation
Transcriptome id Sobic.001G526050.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBQ8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G343700 SWIM zinc finger family protein, putative, expressed -
2 Sobic.003G023901 - -
3 Sobic.003G081200 expressed protein -
4 Sobic.001G315300 chloroplast 30S ribosomal protein S2, putative, expressed -
5 Sobic.009G147450 - -
6 Sobic.002G109900 glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.004G351000 - -
8 Sobic.002G232300 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR15 - Auxin-responsive SAUR gene family member -
9 Sobic.001G072550 - -
10 Sobic.007G223801 - -
11 Sobic.010G172633 - -
12 Sobic.001G248900 exocyst complex component 6, putative, expressed -
13 Sobic.002G292000 - -
14 Sobic.001G184950 - -
15 Sobic.006G249900 MBTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
16 Sobic.005G199151 - -
17 Sobic.004G230000 expressed protein -
18 Sobic.004G230000 expressed protein -
19 Sobic.004G230000 expressed protein -
20 Sobic.004G230000 expressed protein -


Gene co-expression network
sample Sobic001G526050 Sobic001G526050 Sobic001G343700 Sobic001G343700 Sobic001G526050--Sobic001G343700 Sobic003G023901 Sobic003G023901 Sobic001G526050--Sobic003G023901 Sobic003G081200 Sobic003G081200 Sobic001G526050--Sobic003G081200 Sobic001G315300 Sobic001G315300 Sobic001G526050--Sobic001G315300 Sobic009G147450 Sobic009G147450 Sobic001G526050--Sobic009G147450 Sobic002G109900 Sobic002G109900 Sobic001G526050--Sobic002G109900 Sobic004G351000 Sobic004G351000 Sobic001G526050--Sobic004G351000 Sobic002G232300 Sobic002G232300 Sobic001G526050--Sobic002G232300 Sobic001G072550 Sobic001G072550 Sobic001G526050--Sobic001G072550 Sobic001G343700--Sobic003G081200 Sobic001G343700--Sobic009G147450 Sobic001G343700--Sobic002G232300 Sobic004G230000 Sobic004G230000 Sobic001G343700--Sobic004G230000 Sobic007G223801 Sobic007G223801 Sobic003G023901--Sobic007G223801 Sobic003G023901--Sobic002G109900 Sobic002G286500 Sobic002G286500 Sobic003G023901--Sobic002G286500 Sobic003G023901--Sobic001G526050 Sobic003G350850 Sobic003G350850 Sobic003G023901--Sobic003G350850 Sobic003G023901--Sobic001G315300 Sobic001G248900 Sobic001G248900 Sobic003G023901--Sobic001G248900 Sobic010G157600 Sobic010G157600 Sobic003G023901--Sobic010G157600 Sobic006G171801 Sobic006G171801 Sobic003G023901--Sobic006G171801 Sobic003G081200--Sobic009G147450 Sobic003G081200--Sobic001G343700 Sobic004G024350 Sobic004G024350 Sobic003G081200--Sobic004G024350 Sobic003G081200--Sobic004G230000 Sobic010G172633 Sobic010G172633 Sobic001G315300--Sobic010G172633 Sobic001G315300--Sobic002G109900 Sobic001G143850 Sobic001G143850 Sobic001G315300--Sobic001G143850 Sobic004G216650 Sobic004G216650 Sobic001G315300--Sobic004G216650 Sobic003G147800 Sobic003G147800 Sobic001G315300--Sobic003G147800 Sobic001G184950 Sobic001G184950 Sobic001G315300--Sobic001G184950 Sobic002G136500 Sobic002G136500 Sobic001G315300--Sobic002G136500 Sobic001G074900 Sobic001G074900 Sobic001G315300--Sobic001G074900 Sobic001G315300--Sobic002G286500 Sobic005G065050 Sobic005G065050 Sobic009G147450--Sobic005G065050 Sobic009G147450--Sobic003G081200 Sobic010G018200 Sobic010G018200 Sobic009G147450--Sobic010G018200 Sobic009G147450--Sobic004G024350 Sobic001G423666 Sobic001G423666 Sobic009G147450--Sobic001G423666 Sobic009G147450--Sobic004G230000 Sobic002G109900--Sobic001G315300 Sobic002G109900--Sobic003G023901 Sobic002G109900--Sobic002G286500 Sobic002G109900--Sobic007G223801 Sobic002G109900--Sobic010G157600 Sobic002G109900--Sobic001G074900 Sobic004G039800 Sobic004G039800 Sobic002G109900--Sobic004G039800 Sobic002G109900--Sobic001G184950 Sobic009G258000 Sobic009G258000 Sobic002G109900--Sobic009G258000 Sobic005G199151 Sobic005G199151 Sobic004G351000--Sobic005G199151 Sobic004G351000--Sobic002G232300 Sobic008G029000 Sobic008G029000 Sobic004G351000--Sobic008G029000 Sobic001G259850 Sobic001G259850 Sobic004G351000--Sobic001G259850 Sobic004G351000--Sobic010G018200 Sobic002G180732 Sobic002G180732 Sobic004G351000--Sobic002G180732 Sobic005G187800 Sobic005G187800 Sobic004G351000--Sobic005G187800 Sobic004G351000--Sobic001G343700 Sobic009G087480 Sobic009G087480 Sobic004G351000--Sobic009G087480 Sobic002G232300--Sobic004G351000 Sobic002G232300--Sobic004G230000 Sobic001G072550--Sobic002G109900 Sobic001G060800 Sobic001G060800 Sobic001G072550--Sobic001G060800 Sobic001G072550--Sobic001G315300 Sobic001G072550--Sobic001G526050 Sobic001G072550--Sobic001G343700 Sobic001G072550--Sobic003G023901 Sobic001G072550--Sobic003G081200 Sobic001G072550--Sobic010G172633 Sobic001G072550--Sobic001G184950
Octagon: transcription factors


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