Gene annotation
Transcriptome id Sobic.004G056300.1,Sobic.004G056300.2,Sobic.004G056300.3
Synonym Sb04g004740
Functional annotation transglycosylase SLT domain containing protein, expressed
UniProt A0A1Z5RL94 , C5XW44
Pfam PF01464
Panther DB PTHR37179
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16290 : -
RAP-DB (Rice) LOC_Os02g07480.1 : transglycosylase SLT domain containing protein, expressed
MaizeGDB (Corn) Zm00025a034795
Brachypodium KQJ93549 , KQJ93548 , KQJ93547 , KQJ93546 , PNT75812 , KQK02146 , KQK02144 , KQK02145 , KQK02142 , KQK02143 , KQK02141 , PNT69738
Barley -
Wheat TraesCS6B02G185500 , TraesCS6B02G185500 , TraesCS6D02G147100 , TraesCS6D02G147100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G059400 - -
2 Sobic.001G359100 cytochrome P450, putative, expressed -
3 Sobic.003G070200 THION18 - Plant thionin family protein precursor, expressed -
4 Sobic.002G334400 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
5 Sobic.001G153800 Os10bglu34 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
6 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
7 Sobic.002G305400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
8 Sobic.002G260100 - -
9 Sobic.009G087900 transmembrane amino acid transporter protein, putative, expressed -
10 Sobic.004G089400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
11 Sobic.010G005900 nodulin, putative, expressed -
12 Sobic.005G006701 - -
13 Sobic.004G149200 ankyrin, putative, expressed -
14 Sobic.003G206100 THION27 - Plant thionin family protein precursor, expressed -
15 Sobic.006G251301 - -
16 Sobic.009G187700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
17 Sobic.007G068700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
18 Sobic.001G215201 - -
19 Sobic.010G157100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.008G189800 CHCH domain containing protein, expressed -


Gene co-expression network
sample Sobic004G056300 Sobic004G056300 Sobic006G059400 Sobic006G059400 Sobic004G056300--Sobic006G059400 Sobic001G359100 Sobic001G359100 Sobic004G056300--Sobic001G359100 Sobic003G070200 Sobic003G070200 Sobic004G056300--Sobic003G070200 Sobic002G334400 Sobic002G334400 Sobic004G056300--Sobic002G334400 Sobic001G153800 Sobic001G153800 Sobic004G056300--Sobic001G153800 Sobic003G062900 Sobic003G062900 Sobic004G056300--Sobic003G062900 Sobic002G305400 Sobic002G305400 Sobic004G056300--Sobic002G305400 Sobic002G260100 Sobic002G260100 Sobic004G056300--Sobic002G260100 Sobic009G087900 Sobic009G087900 Sobic004G056300--Sobic009G087900 Sobic006G059400--Sobic001G359100 Sobic006G059400--Sobic003G070200 Sobic006G059400--Sobic001G153800 Sobic006G059400--Sobic002G334400 Sobic006G059400--Sobic002G260100 Sobic006G059400--Sobic003G062900 Sobic006G059400--Sobic009G087900 Sobic006G059400--Sobic002G305400 Sobic010G005900 Sobic010G005900 Sobic006G059400--Sobic010G005900 Sobic001G359100--Sobic003G070200 Sobic001G359100--Sobic006G059400 Sobic001G359100--Sobic001G153800 Sobic001G359100--Sobic002G334400 Sobic001G359100--Sobic009G087900 Sobic001G359100--Sobic002G305400 Sobic001G359100--Sobic002G260100 Sobic001G359100--Sobic003G062900 Sobic001G359100--Sobic010G005900 Sobic003G070200--Sobic001G359100 Sobic003G070200--Sobic006G059400 Sobic003G070200--Sobic001G153800 Sobic003G070200--Sobic002G334400 Sobic003G070200--Sobic009G087900 Sobic003G070200--Sobic002G305400 Sobic003G070200--Sobic002G260100 Sobic003G070200--Sobic003G062900 Sobic003G070200--Sobic010G005900 Sobic002G334400--Sobic001G153800 Sobic002G334400--Sobic001G359100 Sobic002G334400--Sobic003G070200 Sobic002G334400--Sobic006G059400 Sobic002G334400--Sobic009G087900 Sobic002G334400--Sobic002G305400 Sobic002G334400--Sobic002G260100 Sobic002G334400--Sobic003G062900 Sobic002G334400--Sobic010G005900 Sobic001G153800--Sobic002G334400 Sobic001G153800--Sobic001G359100 Sobic001G153800--Sobic003G070200 Sobic001G153800--Sobic006G059400 Sobic001G153800--Sobic009G087900 Sobic001G153800--Sobic002G305400 Sobic001G153800--Sobic002G260100 Sobic001G153800--Sobic003G062900 Sobic001G153800--Sobic010G005900 Sobic003G062900--Sobic006G059400 Sobic003G062900--Sobic001G359100 Sobic003G062900--Sobic003G070200 Sobic003G062900--Sobic001G153800 Sobic003G062900--Sobic002G260100 Sobic003G062900--Sobic002G334400 Sobic003G062900--Sobic009G087900 Sobic003G062900--Sobic002G305400 Sobic004G089400 Sobic004G089400 Sobic003G062900--Sobic004G089400 Sobic002G305400--Sobic009G087900 Sobic002G305400--Sobic002G334400 Sobic002G305400--Sobic001G153800 Sobic002G305400--Sobic001G359100 Sobic002G305400--Sobic003G070200 Sobic002G305400--Sobic006G059400 Sobic002G305400--Sobic010G005900 Sobic003G206100 Sobic003G206100 Sobic002G305400--Sobic003G206100 Sobic006G251301 Sobic006G251301 Sobic002G305400--Sobic006G251301 Sobic002G260100--Sobic006G059400 Sobic002G260100--Sobic001G359100 Sobic002G260100--Sobic003G070200 Sobic002G260100--Sobic001G153800 Sobic002G260100--Sobic003G062900 Sobic002G260100--Sobic002G334400 Sobic002G260100--Sobic009G087900 Sobic002G260100--Sobic002G305400 Sobic002G260100--Sobic004G089400 Sobic009G087900--Sobic002G305400 Sobic009G087900--Sobic002G334400 Sobic009G087900--Sobic001G153800 Sobic009G087900--Sobic001G359100 Sobic009G087900--Sobic003G070200 Sobic009G087900--Sobic006G059400 Sobic009G087900--Sobic010G005900 Sobic009G087900--Sobic003G206100 Sobic009G087900--Sobic002G260100
Octagon: transcription factors


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