Gene annotation
Transcriptome id Sobic.004G070000.1
Synonym Sb04g005880
Functional annotation cyclase family protein, putative, expressed
UniProt C5XWZ8
Pfam PF04199
Panther DB PTHR31118 PTHR31118:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004061; arylformamidase activity


Orthologs (automatic annotation)
TAIR AT4G35220 : Cyclase family protein
RAP-DB (Rice) LOC_Os02g09420.1 : cyclase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a019319
Brachypodium KQJ93725 , KQJ93730
Barley HORVU6Hr1G035610.5 , HORVU6Hr1G035610.1 , HORVU6Hr1G035610.3 , HORVU6Hr1G035610.2 , HORVU6Hr1G035640.2 , HORVU6Hr1G035640.3 , HORVU6Hr1G035640.1 , HORVU6Hr1G035640.6 , HORVU6Hr1G035640.7 , HORVU6Hr1G035640.4 , HORVU6Hr1G035640.5 , HORVU6Hr1G035640.8 , HORVU6Hr1G035610.20 , HORVU6Hr1G035610.21 , HORVU6Hr1G035610.11 , HORVU6Hr1G035610.10 , HORVU6Hr1G035610.15 , HORVU6Hr1G035610.14 , HORVU6Hr1G035610.16 , HORVU6Hr1G035610.18
Wheat TraesCS6A02G174500 , TraesCS6D02G163700 , TraesCS6D02G163500 , TraesCS6A02G174600 , TraesCS6B02G203200 , TraesCS6B02G203000 , TraesCS6B02G203200 , TraesCS6B02G203100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G145901 - K05350: beta-glucosidase
2 Sobic.003G160200 multidrug resistance-associated protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
3 Sobic.007G123500 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
4 Sobic.009G011600 expressed protein -
5 Sobic.001G270900 expressed protein -
6 Sobic.006G080800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLH1 - cellulose synthase-like family H, expressed -
7 Sobic.004G253050 - -
8 Sobic.001G151400 nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
9 Sobic.002G390500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pyruvate dehydrogenase kinase(PubMedID : 27016024)@kinase, putative, expressed K00898: pyruvate dehydrogenase kinase 2/3/4
10 Sobic.006G195800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@multidrug resistance-associated protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
11 Sobic.002G311200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.005G209400 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.008G130000 PPR repeat domain containing protein, putative, expressed -
14 Sobic.010G176200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.009G054900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@relA-SpoT like protein RSH4, putative, expressed -
16 Sobic.007G201500 rabGAP/TBC domain-containing protein, putative, expressed K18469: TBC1 domain family member 5
17 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
18 Sobic.009G113800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os5bglu20 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
19 Sobic.010G175400 - -
20 Sobic.010G150800 expressed protein -


Gene co-expression network
sample Sobic004G070000 Sobic004G070000 Sobic006G145901 Sobic006G145901 Sobic004G070000--Sobic006G145901 Sobic003G160200 Sobic003G160200 Sobic004G070000--Sobic003G160200 Sobic007G123500 Sobic007G123500 Sobic004G070000--Sobic007G123500 Sobic009G011600 Sobic009G011600 Sobic004G070000--Sobic009G011600 Sobic001G270900 Sobic001G270900 Sobic004G070000--Sobic001G270900 Sobic006G080800 Sobic006G080800 Sobic004G070000--Sobic006G080800 Sobic004G253050 Sobic004G253050 Sobic004G070000--Sobic004G253050 Sobic001G151400 Sobic001G151400 Sobic004G070000--Sobic001G151400 Sobic002G390500 Sobic002G390500 Sobic004G070000--Sobic002G390500 Sobic006G145901--Sobic009G011600 Sobic002G311200 Sobic002G311200 Sobic006G145901--Sobic002G311200 Sobic001G531500 Sobic001G531500 Sobic006G145901--Sobic001G531500 Sobic001G252000 Sobic001G252000 Sobic006G145901--Sobic001G252000 Sobic010G175400 Sobic010G175400 Sobic006G145901--Sobic010G175400 Sobic005G082200 Sobic005G082200 Sobic006G145901--Sobic005G082200 Sobic002G338100 Sobic002G338100 Sobic006G145901--Sobic002G338100 Sobic001G032700 Sobic001G032700 Sobic006G145901--Sobic001G032700 Sobic006G145901--Sobic003G160200 Sobic001G168250 Sobic001G168250 Sobic003G160200--Sobic001G168250 Sobic010G176200 Sobic010G176200 Sobic003G160200--Sobic010G176200 Sobic008G130000 Sobic008G130000 Sobic003G160200--Sobic008G130000 Sobic003G160200--Sobic007G123500 Sobic009G113800 Sobic009G113800 Sobic003G160200--Sobic009G113800 Sobic002G193800 Sobic002G193800 Sobic003G160200--Sobic002G193800 Sobic008G115900 Sobic008G115900 Sobic003G160200--Sobic008G115900 Sobic009G237100 Sobic009G237100 Sobic003G160200--Sobic009G237100 Sobic004G356400 Sobic004G356400 Sobic003G160200--Sobic004G356400 Sobic004G120100 Sobic004G120100 Sobic007G123500--Sobic004G120100 Sobic007G123500--Sobic003G160200 Sobic007G123500--Sobic008G115900 Sobic007G123500--Sobic010G176200 Sobic005G084500 Sobic005G084500 Sobic007G123500--Sobic005G084500 Sobic007G123500--Sobic008G130000 Sobic007G136200 Sobic007G136200 Sobic007G123500--Sobic007G136200 Sobic001G516901 Sobic001G516901 Sobic007G123500--Sobic001G516901 Sobic001G333800 Sobic001G333800 Sobic007G123500--Sobic001G333800 Sobic004G034600 Sobic004G034600 Sobic009G011600--Sobic004G034600 Sobic001G517800 Sobic001G517800 Sobic009G011600--Sobic001G517800 Sobic001G496100 Sobic001G496100 Sobic009G011600--Sobic001G496100 Sobic005G149700 Sobic005G149700 Sobic009G011600--Sobic005G149700 Sobic010G020800 Sobic010G020800 Sobic009G011600--Sobic010G020800 Sobic007G169300 Sobic007G169300 Sobic009G011600--Sobic007G169300 Sobic002G249300 Sobic002G249300 Sobic009G011600--Sobic002G249300 Sobic005G149200 Sobic005G149200 Sobic009G011600--Sobic005G149200 Sobic010G043100 Sobic010G043100 Sobic009G011600--Sobic010G043100 Sobic001G270900--Sobic008G115900 Sobic008G094000 Sobic008G094000 Sobic001G270900--Sobic008G094000 Sobic003G343500 Sobic003G343500 Sobic001G270900--Sobic003G343500 Sobic001G270900--Sobic010G176200 Sobic001G270900--Sobic001G531500 Sobic001G270900--Sobic008G130000 Sobic003G229300 Sobic003G229300 Sobic001G270900--Sobic003G229300 Sobic001G017300 Sobic001G017300 Sobic001G270900--Sobic001G017300 Sobic001G270900--Sobic004G356400 Sobic006G080750 Sobic006G080750 Sobic006G080800--Sobic006G080750 Sobic005G209400 Sobic005G209400 Sobic006G080800--Sobic005G209400 Sobic001G073500 Sobic001G073500 Sobic006G080800--Sobic001G073500 Sobic006G080800--Sobic001G151400 Sobic006G135575 Sobic006G135575 Sobic006G080800--Sobic006G135575 Sobic006G205100 Sobic006G205100 Sobic006G080800--Sobic006G205100 Sobic001G111700 Sobic001G111700 Sobic006G080800--Sobic001G111700 Sobic006G080800--Sobic003G160200 Sobic001G184100 Sobic001G184100 Sobic006G080800--Sobic001G184100 Sobic006G092000 Sobic006G092000 Sobic004G253050--Sobic006G092000 Sobic003G262200 Sobic003G262200 Sobic004G253050--Sobic003G262200 Sobic004G253050--Sobic008G115900 Sobic004G253050--Sobic001G270900 Sobic004G253050--Sobic003G229300 Sobic006G050700 Sobic006G050700 Sobic004G253050--Sobic006G050700 Sobic003G138500 Sobic003G138500 Sobic004G253050--Sobic003G138500 Sobic003G247500 Sobic003G247500 Sobic004G253050--Sobic003G247500 Sobic004G253050--Sobic007G123500 Sobic001G151400--Sobic009G011600 Sobic001G151400--Sobic003G160200 Sobic001G500800 Sobic001G500800 Sobic001G151400--Sobic001G500800 Sobic001G151400--Sobic001G032700 Sobic001G151400--Sobic007G169300 Sobic002G421300 Sobic002G421300 Sobic001G151400--Sobic002G421300 Sobic006G151600 Sobic006G151600 Sobic001G151400--Sobic006G151600 Sobic001G308200 Sobic001G308200 Sobic001G151400--Sobic001G308200 Sobic001G151400--Sobic006G080800 Sobic002G412100 Sobic002G412100 Sobic002G390500--Sobic002G412100 Sobic009G219100 Sobic009G219100 Sobic002G390500--Sobic009G219100 Sobic005G179300 Sobic005G179300 Sobic002G390500--Sobic005G179300 Sobic002G390500--Sobic003G343500 Sobic002G390500--Sobic001G333800 Sobic010G181100 Sobic010G181100 Sobic002G390500--Sobic010G181100 Sobic006G259600 Sobic006G259600 Sobic002G390500--Sobic006G259600 Sobic003G080700 Sobic003G080700 Sobic002G390500--Sobic003G080700 Sobic001G003200 Sobic001G003200 Sobic002G390500--Sobic001G003200
Octagon: transcription factors


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