Gene annotation
Transcriptome id Sobic.006G080800.1,Sobic.006G080800.2
Synonym ATCSLB04, CSLB04, ATCSLB4, Sb06g016770
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
CSLH1 - cellulose synthase-like family H, expressed
UniProt A0A1B6PKX9 , A0A1B6PKY0
Pfam PF03552
Panther DB PTHR13301:SF53 PTHR13301 PTHR13301 PTHR13301:SF53
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane GO:0016020membrane GO:0016760cellulose synthase (UDP-forming) activity


Orthologs (automatic annotation)
TAIR AT2G32540 : cellulose synthase-like B4
RAP-DB (Rice) LOC_Os10g20090.1 : CSLH1 - cellulose synthase-like family H, expressed
MaizeGDB (Corn) Zm00025a011400
Brachypodium -
Barley -
Wheat TraesCS2D02G301000 , TraesCS2A02G302300 , TraesCS2A02G302300 , TraesCS2A02G302300
Populus -


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cDNA sequences
Sobic.006G080800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G080750 - -
2 Sobic.005G209400 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.001G073500 5-nucleotidase domain-containing protein, putative, expressed -
4 Sobic.001G151400 nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
5 Sobic.006G135575 - -
6 Sobic.006G205100 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.001G111700 alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.003G160200 multidrug resistance-associated protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
9 Sobic.001G184100 Osmotic stress potassium transporter(PubMedID : 28620409)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
10 Sobic.008G079400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.001G159032 - -
12 Sobic.008G026800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
13 Sobic.007G201500 rabGAP/TBC domain-containing protein, putative, expressed K18469: TBC1 domain family member 5
14 Sobic.009G011600 expressed protein -
15 Sobic.001G463200 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
16 Sobic.002G421300 stress responsive protein, putative, expressed -
17 Sobic.006G147300 -(PubMedID : 26465154)@expressed protein -
18 Sobic.003G097800 - -
19 Sobic.004G125200 - -
20 Sobic.004G070000 cyclase family protein, putative, expressed -


Gene co-expression network
sample Sobic006G080800 Sobic006G080800 Sobic006G080750 Sobic006G080750 Sobic006G080800--Sobic006G080750 Sobic005G209400 Sobic005G209400 Sobic006G080800--Sobic005G209400 Sobic001G073500 Sobic001G073500 Sobic006G080800--Sobic001G073500 Sobic001G151400 Sobic001G151400 Sobic006G080800--Sobic001G151400 Sobic006G135575 Sobic006G135575 Sobic006G080800--Sobic006G135575 Sobic006G205100 Sobic006G205100 Sobic006G080800--Sobic006G205100 Sobic001G111700 Sobic001G111700 Sobic006G080800--Sobic001G111700 Sobic003G160200 Sobic003G160200 Sobic006G080800--Sobic003G160200 Sobic001G184100 Sobic001G184100 Sobic006G080800--Sobic001G184100 Sobic006G080750--Sobic006G080800 Sobic006G080750--Sobic005G209400 Sobic006G080750--Sobic001G184100 Sobic006G080750--Sobic006G135575 Sobic002G421300 Sobic002G421300 Sobic006G080750--Sobic002G421300 Sobic006G080750--Sobic001G151400 Sobic006G080750--Sobic001G111700 Sobic006G080750--Sobic001G073500 Sobic006G006700 Sobic006G006700 Sobic006G080750--Sobic006G006700 Sobic005G209400--Sobic006G080800 Sobic003G097800 Sobic003G097800 Sobic005G209400--Sobic003G097800 Sobic008G079400 Sobic008G079400 Sobic005G209400--Sobic008G079400 Sobic005G209400--Sobic006G135575 Sobic001G463200 Sobic001G463200 Sobic005G209400--Sobic001G463200 Sobic004G144600 Sobic004G144600 Sobic005G209400--Sobic004G144600 Sobic005G209400--Sobic006G080750 Sobic005G209400--Sobic001G151400 Sobic001G078400 Sobic001G078400 Sobic005G209400--Sobic001G078400 Sobic007G201500 Sobic007G201500 Sobic001G073500--Sobic007G201500 Sobic009G011600 Sobic009G011600 Sobic001G073500--Sobic009G011600 Sobic003G434900 Sobic003G434900 Sobic001G073500--Sobic003G434900 Sobic005G149200 Sobic005G149200 Sobic001G073500--Sobic005G149200 Sobic001G073500--Sobic006G080800 Sobic001G073500--Sobic006G205100 Sobic006G087700 Sobic006G087700 Sobic001G073500--Sobic006G087700 Sobic001G375100 Sobic001G375100 Sobic001G073500--Sobic001G375100 Sobic010G205100 Sobic010G205100 Sobic001G073500--Sobic010G205100 Sobic001G151400--Sobic009G011600 Sobic001G151400--Sobic003G160200 Sobic001G500800 Sobic001G500800 Sobic001G151400--Sobic001G500800 Sobic001G032700 Sobic001G032700 Sobic001G151400--Sobic001G032700 Sobic007G169300 Sobic007G169300 Sobic001G151400--Sobic007G169300 Sobic001G151400--Sobic002G421300 Sobic006G151600 Sobic006G151600 Sobic001G151400--Sobic006G151600 Sobic001G308200 Sobic001G308200 Sobic001G151400--Sobic001G308200 Sobic001G151400--Sobic006G080800 Sobic010G183100 Sobic010G183100 Sobic006G135575--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic006G135575--Sobic004G035700 Sobic010G183032 Sobic010G183032 Sobic006G135575--Sobic010G183032 Sobic010G108401 Sobic010G108401 Sobic006G135575--Sobic010G108401 Sobic007G189700 Sobic007G189700 Sobic006G135575--Sobic007G189700 Sobic003G199800 Sobic003G199800 Sobic006G135575--Sobic003G199800 Sobic006G135575--Sobic005G209400 Sobic001G068400 Sobic001G068400 Sobic006G135575--Sobic001G068400 Sobic009G222200 Sobic009G222200 Sobic006G135575--Sobic009G222200 Sobic006G205100--Sobic001G073500 Sobic002G273300 Sobic002G273300 Sobic006G205100--Sobic002G273300 Sobic001G207700 Sobic001G207700 Sobic006G205100--Sobic001G207700 Sobic001G484800 Sobic001G484800 Sobic006G205100--Sobic001G484800 Sobic010G176200 Sobic010G176200 Sobic006G205100--Sobic010G176200 Sobic004G343500 Sobic004G343500 Sobic006G205100--Sobic004G343500 Sobic006G205100--Sobic007G201500 Sobic003G004200 Sobic003G004200 Sobic006G205100--Sobic003G004200 Sobic001G065600 Sobic001G065600 Sobic006G205100--Sobic001G065600 Sobic004G026300 Sobic004G026300 Sobic001G111700--Sobic004G026300 Sobic001G111700--Sobic010G183100 Sobic001G111700--Sobic007G189700 Sobic004G351700 Sobic004G351700 Sobic001G111700--Sobic004G351700 Sobic001G111700--Sobic003G199800 Sobic001G111700--Sobic009G222200 Sobic003G036100 Sobic003G036100 Sobic001G111700--Sobic003G036100 Sobic004G353700 Sobic004G353700 Sobic001G111700--Sobic004G353700 Sobic008G108400 Sobic008G108400 Sobic001G111700--Sobic008G108400 Sobic001G168250 Sobic001G168250 Sobic003G160200--Sobic001G168250 Sobic003G160200--Sobic010G176200 Sobic008G130000 Sobic008G130000 Sobic003G160200--Sobic008G130000 Sobic007G123500 Sobic007G123500 Sobic003G160200--Sobic007G123500 Sobic009G113800 Sobic009G113800 Sobic003G160200--Sobic009G113800 Sobic002G193800 Sobic002G193800 Sobic003G160200--Sobic002G193800 Sobic008G115900 Sobic008G115900 Sobic003G160200--Sobic008G115900 Sobic009G237100 Sobic009G237100 Sobic003G160200--Sobic009G237100 Sobic004G356400 Sobic004G356400 Sobic003G160200--Sobic004G356400 Sobic001G184100--Sobic010G108401 Sobic004G026700 Sobic004G026700 Sobic001G184100--Sobic004G026700 Sobic001G184100--Sobic010G183032 Sobic001G274600 Sobic001G274600 Sobic001G184100--Sobic001G274600 Sobic001G184100--Sobic008G079400 Sobic004G071800 Sobic004G071800 Sobic001G184100--Sobic004G071800 Sobic004G272600 Sobic004G272600 Sobic001G184100--Sobic004G272600 Sobic002G000500 Sobic002G000500 Sobic001G184100--Sobic002G000500 Sobic003G404900 Sobic003G404900 Sobic001G184100--Sobic003G404900
Octagon: transcription factors


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