Gene annotation
Transcriptome id Sobic.005G209400.2,Sobic.005G209400.1
Synonym CRK25
Functional annotation TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt A0A1Z5RJQ3 , C5Y7I4
Pfam PF00069
Panther DB PTHR27002 PTHR27002 PTHR27002:SF79
NCBI CDD KOG1187; Serine/threonine protein kinase KOG0198MEKK and related serine/threonine protein kinases
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G05200 : cysteine-rich RLK (RECEPTOR-like protein kinase) 25
RAP-DB (Rice) LOC_Os06g47530.1 : TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a029167
Brachypodium -
Barley HORVU7Hr1G010320.9 , HORVU7Hr1G010320.8 , HORVU7Hr1G010320.4 , HORVU7Hr1G010320.3 , HORVU7Hr1G010320.6 , HORVU7Hr1G010320.2 , HORVU7Hr1G010320.18 , HORVU7Hr1G010320.11 , HORVU7Hr1G010320.10 , HORVU7Hr1G010320.12 , HORVU7Hr1G010320.14 , HORVU7Hr1G010320.16 , HORVU7Hr1G010320.7
Wheat TraesCS7D02G052100 , TraesCS4A02G433800 , TraesCS7A02G056800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G080800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLH1 - cellulose synthase-like family H, expressed -
2 Sobic.003G097800 - -
3 Sobic.008G079400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.006G135575 - -
5 Sobic.001G463200 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
6 Sobic.004G144600 - -
7 Sobic.006G080750 - -
8 Sobic.001G151400 nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
9 Sobic.001G078400 OsSigP2 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K03100: signal peptidase I
10 Sobic.002G098800 peroxiredoxin, putative, expressed -
11 Sobic.001G184100 Osmotic stress potassium transporter(PubMedID : 28620409)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
12 Sobic.004G026700 down-regulated TF in developmental senescence(PubMedID : 27586543)@transcription factor, putative, expressed K09060: plant G-box-binding factor
13 Sobic.002G421300 stress responsive protein, putative, expressed -
14 Sobic.008G026800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
15 Sobic.009G171300 PX domain containing protein, expressed -
16 Sobic.006G147300 -(PubMedID : 26465154)@expressed protein -
17 Sobic.001G073500 5-nucleotidase domain-containing protein, putative, expressed -
18 Sobic.003G160200 multidrug resistance-associated protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
19 Sobic.006G205100 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.003G199800 expressed protein -


Gene co-expression network
sample Sobic005G209400 Sobic005G209400 Sobic006G080800 Sobic006G080800 Sobic005G209400--Sobic006G080800 Sobic003G097800 Sobic003G097800 Sobic005G209400--Sobic003G097800 Sobic008G079400 Sobic008G079400 Sobic005G209400--Sobic008G079400 Sobic006G135575 Sobic006G135575 Sobic005G209400--Sobic006G135575 Sobic001G463200 Sobic001G463200 Sobic005G209400--Sobic001G463200 Sobic004G144600 Sobic004G144600 Sobic005G209400--Sobic004G144600 Sobic006G080750 Sobic006G080750 Sobic005G209400--Sobic006G080750 Sobic001G151400 Sobic001G151400 Sobic005G209400--Sobic001G151400 Sobic001G078400 Sobic001G078400 Sobic005G209400--Sobic001G078400 Sobic006G080800--Sobic006G080750 Sobic006G080800--Sobic005G209400 Sobic001G073500 Sobic001G073500 Sobic006G080800--Sobic001G073500 Sobic006G080800--Sobic001G151400 Sobic006G080800--Sobic006G135575 Sobic006G205100 Sobic006G205100 Sobic006G080800--Sobic006G205100 Sobic001G111700 Sobic001G111700 Sobic006G080800--Sobic001G111700 Sobic003G160200 Sobic003G160200 Sobic006G080800--Sobic003G160200 Sobic001G184100 Sobic001G184100 Sobic006G080800--Sobic001G184100 Sobic005G015200 Sobic005G015200 Sobic003G097800--Sobic005G015200 Sobic005G118300 Sobic005G118300 Sobic003G097800--Sobic005G118300 Sobic005G217900 Sobic005G217900 Sobic003G097800--Sobic005G217900 Sobic004G210601 Sobic004G210601 Sobic003G097800--Sobic004G210601 Sobic005G065500 Sobic005G065500 Sobic003G097800--Sobic005G065500 Sobic005G167500 Sobic005G167500 Sobic003G097800--Sobic005G167500 Sobic003G058001 Sobic003G058001 Sobic003G097800--Sobic003G058001 Sobic009G202400 Sobic009G202400 Sobic003G097800--Sobic009G202400 Sobic001G338700 Sobic001G338700 Sobic003G097800--Sobic001G338700 Sobic004G026700 Sobic004G026700 Sobic008G079400--Sobic004G026700 Sobic008G079400--Sobic001G184100 Sobic008G079400--Sobic005G209400 Sobic006G051300 Sobic006G051300 Sobic008G079400--Sobic006G051300 Sobic004G035601 Sobic004G035601 Sobic008G079400--Sobic004G035601 Sobic008G079400--Sobic001G463200 Sobic006G147300 Sobic006G147300 Sobic008G079400--Sobic006G147300 Sobic010G183100 Sobic010G183100 Sobic008G079400--Sobic010G183100 Sobic002G000500 Sobic002G000500 Sobic008G079400--Sobic002G000500 Sobic006G135575--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic006G135575--Sobic004G035700 Sobic010G183032 Sobic010G183032 Sobic006G135575--Sobic010G183032 Sobic010G108401 Sobic010G108401 Sobic006G135575--Sobic010G108401 Sobic007G189700 Sobic007G189700 Sobic006G135575--Sobic007G189700 Sobic003G199800 Sobic003G199800 Sobic006G135575--Sobic003G199800 Sobic006G135575--Sobic005G209400 Sobic001G068400 Sobic001G068400 Sobic006G135575--Sobic001G068400 Sobic009G222200 Sobic009G222200 Sobic006G135575--Sobic009G222200 Sobic004G272600 Sobic004G272600 Sobic001G463200--Sobic004G272600 Sobic008G026800 Sobic008G026800 Sobic001G463200--Sobic008G026800 Sobic001G463200--Sobic004G035601 Sobic002G064000 Sobic002G064000 Sobic001G463200--Sobic002G064000 Sobic001G463200--Sobic006G147300 Sobic001G463200--Sobic006G051300 Sobic005G111200 Sobic005G111200 Sobic001G463200--Sobic005G111200 Sobic008G015100 Sobic008G015100 Sobic001G463200--Sobic008G015100 Sobic008G053200 Sobic008G053200 Sobic001G463200--Sobic008G053200 Sobic001G065600 Sobic001G065600 Sobic004G144600--Sobic001G065600 Sobic008G115900 Sobic008G115900 Sobic004G144600--Sobic008G115900 Sobic003G110800 Sobic003G110800 Sobic004G144600--Sobic003G110800 Sobic006G173600 Sobic006G173600 Sobic004G144600--Sobic006G173600 Sobic005G110502 Sobic005G110502 Sobic004G144600--Sobic005G110502 Sobic002G098800 Sobic002G098800 Sobic004G144600--Sobic002G098800 Sobic003G343500 Sobic003G343500 Sobic004G144600--Sobic003G343500 Sobic003G262200 Sobic003G262200 Sobic004G144600--Sobic003G262200 Sobic002G358500 Sobic002G358500 Sobic004G144600--Sobic002G358500 Sobic006G080750--Sobic006G080800 Sobic006G080750--Sobic005G209400 Sobic006G080750--Sobic001G184100 Sobic006G080750--Sobic006G135575 Sobic002G421300 Sobic002G421300 Sobic006G080750--Sobic002G421300 Sobic006G080750--Sobic001G151400 Sobic006G080750--Sobic001G111700 Sobic006G080750--Sobic001G073500 Sobic006G006700 Sobic006G006700 Sobic006G080750--Sobic006G006700 Sobic009G011600 Sobic009G011600 Sobic001G151400--Sobic009G011600 Sobic001G151400--Sobic003G160200 Sobic001G500800 Sobic001G500800 Sobic001G151400--Sobic001G500800 Sobic001G032700 Sobic001G032700 Sobic001G151400--Sobic001G032700 Sobic007G169300 Sobic007G169300 Sobic001G151400--Sobic007G169300 Sobic001G151400--Sobic002G421300 Sobic006G151600 Sobic006G151600 Sobic001G151400--Sobic006G151600 Sobic001G308200 Sobic001G308200 Sobic001G151400--Sobic001G308200 Sobic001G151400--Sobic006G080800 Sobic002G030500 Sobic002G030500 Sobic001G078400--Sobic002G030500 Sobic001G078400--Sobic004G026700 Sobic004G033700 Sobic004G033700 Sobic001G078400--Sobic004G033700 Sobic008G066100 Sobic008G066100 Sobic001G078400--Sobic008G066100 Sobic007G029700 Sobic007G029700 Sobic001G078400--Sobic007G029700 Sobic002G000700 Sobic002G000700 Sobic001G078400--Sobic002G000700 Sobic001G078400--Sobic006G147300 Sobic001G078400--Sobic001G338700 Sobic001G078400--Sobic008G015100
Octagon: transcription factors


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