Gene annotation
Transcriptome id Sobic.001G073500.1
Synonym Sb01g006630
Functional annotation 5-nucleotidase domain-containing protein, putative, expressed
UniProt A0A1Z5S4S4
Pfam PF05761
Panther DB PTHR12103 PTHR12103:SF21
NCBI CDD KOG2469; IMP-GMP specific 5'-nucleotidase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75210 : HAD-superfamily hydrolase, subfamily IG, 5\'-nucleotidase
RAP-DB (Rice) LOC_Os03g56310.1 : 5-nucleotidase domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a008375
Brachypodium KQK12972
Barley HORVU5Hr1G098980.9 , HORVU5Hr1G098980.8 , HORVU5Hr1G098980.3 , HORVU5Hr1G098980.2 , HORVU5Hr1G098980.1 , HORVU5Hr1G098980.7 , HORVU5Hr1G098980.6 , HORVU5Hr1G098980.5 , HORVU5Hr1G098980.4 , HORVU5Hr1G098980.13 , HORVU5Hr1G098980.12 , HORVU5Hr1G098980.11 , HORVU5Hr1G098980.10 , HORVU5Hr1G098980.16 , HORVU5Hr1G098980.15 , HORVU5Hr1G098980.14
Wheat TraesCS5A02G408400 , TraesCS5A02G408400 , TraesCS5D02G418200 , TraesCS5D02G418200 , TraesCS5D02G418200 , TraesCS5B02G413100 , TraesCS5B02G413100
Populus -


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cDNA sequences
Sobic.001G073500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G201500 rabGAP/TBC domain-containing protein, putative, expressed K18469: TBC1 domain family member 5
2 Sobic.009G011600 expressed protein -
3 Sobic.003G434900 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
4 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
5 Sobic.006G080800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLH1 - cellulose synthase-like family H, expressed -
6 Sobic.006G205100 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.006G087700 T-complex protein 11, putative, expressed -
8 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
9 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
10 Sobic.010G176200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.010G099700 peptide transporter PTR2, putative, expressed -
12 Sobic.010G227800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metal transporter Nramp6, putative, expressed -
13 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
14 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
15 Sobic.008G130000 PPR repeat domain containing protein, putative, expressed -
16 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
17 Sobic.006G135600 Up-regulated by silicon application under drought stress (PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
18 Sobic.008G094000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
19 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G392900 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase


Gene co-expression network
sample Sobic001G073500 Sobic001G073500 Sobic007G201500 Sobic007G201500 Sobic001G073500--Sobic007G201500 Sobic009G011600 Sobic009G011600 Sobic001G073500--Sobic009G011600 Sobic003G434900 Sobic003G434900 Sobic001G073500--Sobic003G434900 Sobic005G149200 Sobic005G149200 Sobic001G073500--Sobic005G149200 Sobic006G080800 Sobic006G080800 Sobic001G073500--Sobic006G080800 Sobic006G205100 Sobic006G205100 Sobic001G073500--Sobic006G205100 Sobic006G087700 Sobic006G087700 Sobic001G073500--Sobic006G087700 Sobic001G375100 Sobic001G375100 Sobic001G073500--Sobic001G375100 Sobic010G205100 Sobic010G205100 Sobic001G073500--Sobic010G205100 Sobic007G201500--Sobic001G073500 Sobic006G222600 Sobic006G222600 Sobic007G201500--Sobic006G222600 Sobic010G210500 Sobic010G210500 Sobic007G201500--Sobic010G210500 Sobic007G201500--Sobic001G375100 Sobic007G201500--Sobic010G205100 Sobic002G305000 Sobic002G305000 Sobic007G201500--Sobic002G305000 Sobic010G176200 Sobic010G176200 Sobic007G201500--Sobic010G176200 Sobic003G354600 Sobic003G354600 Sobic007G201500--Sobic003G354600 Sobic008G130000 Sobic008G130000 Sobic007G201500--Sobic008G130000 Sobic004G034600 Sobic004G034600 Sobic009G011600--Sobic004G034600 Sobic001G517800 Sobic001G517800 Sobic009G011600--Sobic001G517800 Sobic001G496100 Sobic001G496100 Sobic009G011600--Sobic001G496100 Sobic005G149700 Sobic005G149700 Sobic009G011600--Sobic005G149700 Sobic010G020800 Sobic010G020800 Sobic009G011600--Sobic010G020800 Sobic007G169300 Sobic007G169300 Sobic009G011600--Sobic007G169300 Sobic002G249300 Sobic002G249300 Sobic009G011600--Sobic002G249300 Sobic009G011600--Sobic005G149200 Sobic010G043100 Sobic010G043100 Sobic009G011600--Sobic010G043100 Sobic003G434900--Sobic005G149200 Sobic003G434900--Sobic001G375100 Sobic003G205200 Sobic003G205200 Sobic003G434900--Sobic003G205200 Sobic003G434900--Sobic001G073500 Sobic001G454500 Sobic001G454500 Sobic003G434900--Sobic001G454500 Sobic003G317500 Sobic003G317500 Sobic003G434900--Sobic003G317500 Sobic010G139600 Sobic010G139600 Sobic003G434900--Sobic010G139600 Sobic003G434900--Sobic006G087700 Sobic006G225900 Sobic006G225900 Sobic003G434900--Sobic006G225900 Sobic005G149200--Sobic001G375100 Sobic006G219600 Sobic006G219600 Sobic005G149200--Sobic006G219600 Sobic005G149200--Sobic001G454500 Sobic006G133900 Sobic006G133900 Sobic005G149200--Sobic006G133900 Sobic003G301900 Sobic003G301900 Sobic005G149200--Sobic003G301900 Sobic005G149200--Sobic001G517800 Sobic001G333800 Sobic001G333800 Sobic005G149200--Sobic001G333800 Sobic007G090403 Sobic007G090403 Sobic005G149200--Sobic007G090403 Sobic003G155100 Sobic003G155100 Sobic005G149200--Sobic003G155100 Sobic006G080750 Sobic006G080750 Sobic006G080800--Sobic006G080750 Sobic005G209400 Sobic005G209400 Sobic006G080800--Sobic005G209400 Sobic006G080800--Sobic001G073500 Sobic001G151400 Sobic001G151400 Sobic006G080800--Sobic001G151400 Sobic006G135575 Sobic006G135575 Sobic006G080800--Sobic006G135575 Sobic006G080800--Sobic006G205100 Sobic001G111700 Sobic001G111700 Sobic006G080800--Sobic001G111700 Sobic003G160200 Sobic003G160200 Sobic006G080800--Sobic003G160200 Sobic001G184100 Sobic001G184100 Sobic006G080800--Sobic001G184100 Sobic006G205100--Sobic001G073500 Sobic002G273300 Sobic002G273300 Sobic006G205100--Sobic002G273300 Sobic001G207700 Sobic001G207700 Sobic006G205100--Sobic001G207700 Sobic001G484800 Sobic001G484800 Sobic006G205100--Sobic001G484800 Sobic006G205100--Sobic010G176200 Sobic004G343500 Sobic004G343500 Sobic006G205100--Sobic004G343500 Sobic006G205100--Sobic007G201500 Sobic003G004200 Sobic003G004200 Sobic006G205100--Sobic003G004200 Sobic001G065600 Sobic001G065600 Sobic006G205100--Sobic001G065600 Sobic007G075400 Sobic007G075400 Sobic006G087700--Sobic007G075400 Sobic003G322700 Sobic003G322700 Sobic006G087700--Sobic003G322700 Sobic006G233500 Sobic006G233500 Sobic006G087700--Sobic006G233500 Sobic006G087700--Sobic010G139600 Sobic006G087700--Sobic003G301900 Sobic003G320700 Sobic003G320700 Sobic006G087700--Sobic003G320700 Sobic006G204900 Sobic006G204900 Sobic006G087700--Sobic006G204900 Sobic002G128200 Sobic002G128200 Sobic006G087700--Sobic002G128200 Sobic006G043600 Sobic006G043600 Sobic006G087700--Sobic006G043600 Sobic001G375100--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic001G375100--Sobic008G001200 Sobic001G375100--Sobic005G149200 Sobic003G247500 Sobic003G247500 Sobic001G375100--Sobic003G247500 Sobic001G375100--Sobic001G454500 Sobic010G010700 Sobic010G010700 Sobic001G375100--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic001G375100--Sobic002G008900 Sobic007G198300 Sobic007G198300 Sobic001G375100--Sobic007G198300 Sobic005G001000 Sobic005G001000 Sobic001G375100--Sobic005G001000 Sobic006G064100 Sobic006G064100 Sobic010G205100--Sobic006G064100 Sobic010G085100 Sobic010G085100 Sobic010G205100--Sobic010G085100 Sobic001G531500 Sobic001G531500 Sobic010G205100--Sobic001G531500 Sobic001G073900 Sobic001G073900 Sobic010G205100--Sobic001G073900 Sobic009G038900 Sobic009G038900 Sobic010G205100--Sobic009G038900 Sobic003G036200 Sobic003G036200 Sobic010G205100--Sobic003G036200 Sobic005G101200 Sobic005G101200 Sobic010G205100--Sobic005G101200 Sobic002G404800 Sobic002G404800 Sobic010G205100--Sobic002G404800 Sobic003G332700 Sobic003G332700 Sobic010G205100--Sobic003G332700
Octagon: transcription factors


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