Gene annotation
Transcriptome id Sobic.003G392900.4,Sobic.003G392900.5,Sobic.003G392900.3
Synonym Sb03g043040
Functional annotation ABC1 family domain containing protein, putative, expressed
UniProt A0A1B6Q7P2
Pfam PF01163
Panther DB PTHR10566 PTHR10566:SF72
NCBI CDD KOG1235; Predicted unusual protein kinase
KEGG Orthology K08869; ADCK, aarF domain-containing kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24810 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g67720.1 : ABC1 family domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a032491 , Zm00025a026383 , Zm00025a039433
Brachypodium KQK11074 , KQK11075
Barley HORVU3Hr1G088660.10 , HORVU3Hr1G088660.11 , HORVU3Hr1G088660.1 , HORVU3Hr1G088660.3 , HORVU3Hr1G088660.2 , HORVU3Hr1G088660.5 , HORVU3Hr1G088660.4 , HORVU3Hr1G088660.7 , HORVU3Hr1G088660.6 , HORVU3Hr1G088660.9 , HORVU3Hr1G088660.8
Wheat TraesCS3D02G385300 , TraesCS3A02G392200 , TraesCS3A02G392200 , TraesCS3D02G385300 , TraesCS3B02G424200 , TraesCS3B02G424200 , TraesCS3B02G424200
Populus -


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cDNA sequences
Sobic.003G392900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G325300 acyltransferase, putative, expressed K13506: GPAT3_4, AGPAT9, glycerol-3-phosphate O-acyltransferase 3/4
2 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
3 Sobic.009G255700 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
4 Sobic.003G418100 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
5 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
6 Sobic.001G305600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
7 Sobic.003G247500 expressed protein -
8 Sobic.006G126500 OsFBX146 - F-box domain containing protein, expressed -
9 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
10 Sobic.006G135600 Up-regulated by silicon application under drought stress (PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
11 Sobic.001G451450 - -
12 Sobic.001G439300 AGAP009131-PA, putative, expressed K18826: calmodulin-lysine N-methyltransferase
13 Sobic.010G210500 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
14 Sobic.005G167700 protein phosphatase 2C, putative, expressed -
15 Sobic.001G039900 KH domain containing protein, putative, expressed K14945: protein quaking
16 Sobic.008G151100 protein kinase domain containing protein, expressed -
17 Sobic.005G162500 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
18 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
19 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.010G236300 "domain confirmed by Pfam database, expressed in root, expression induced BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -


Gene co-expression network
sample Sobic003G392900 Sobic003G392900 Sobic002G325300 Sobic002G325300 Sobic003G392900--Sobic002G325300 Sobic001G370900 Sobic001G370900 Sobic003G392900--Sobic001G370900 Sobic009G255700 Sobic009G255700 Sobic003G392900--Sobic009G255700 Sobic003G418100 Sobic003G418100 Sobic003G392900--Sobic003G418100 Sobic008G001200 Sobic008G001200 Sobic003G392900--Sobic008G001200 Sobic001G305600 Sobic001G305600 Sobic003G392900--Sobic001G305600 Sobic003G247500 Sobic003G247500 Sobic003G392900--Sobic003G247500 Sobic006G126500 Sobic006G126500 Sobic003G392900--Sobic006G126500 Sobic001G375100 Sobic001G375100 Sobic003G392900--Sobic001G375100 Sobic006G185100 Sobic006G185100 Sobic002G325300--Sobic006G185100 Sobic001G194200 Sobic001G194200 Sobic002G325300--Sobic001G194200 Sobic006G252900 Sobic006G252900 Sobic002G325300--Sobic006G252900 Sobic002G325300--Sobic003G247500 Sobic003G119600 Sobic003G119600 Sobic002G325300--Sobic003G119600 Sobic006G041600 Sobic006G041600 Sobic002G325300--Sobic006G041600 Sobic002G325300--Sobic008G001200 Sobic004G244900 Sobic004G244900 Sobic002G325300--Sobic004G244900 Sobic009G256400 Sobic009G256400 Sobic002G325300--Sobic009G256400 Sobic008G098900 Sobic008G098900 Sobic001G370900--Sobic008G098900 Sobic005G001000 Sobic005G001000 Sobic001G370900--Sobic005G001000 Sobic001G370900--Sobic009G256400 Sobic002G146300 Sobic002G146300 Sobic001G370900--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic001G370900--Sobic003G205200 Sobic001G370900--Sobic001G194200 Sobic004G276400 Sobic004G276400 Sobic001G370900--Sobic004G276400 Sobic001G370900--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic001G370900--Sobic001G457800 Sobic001G192000 Sobic001G192000 Sobic009G255700--Sobic001G192000 Sobic008G088872 Sobic008G088872 Sobic009G255700--Sobic008G088872 Sobic002G275700 Sobic002G275700 Sobic009G255700--Sobic002G275700 Sobic009G255700--Sobic001G370900 Sobic005G162500 Sobic005G162500 Sobic009G255700--Sobic005G162500 Sobic006G184900 Sobic006G184900 Sobic009G255700--Sobic006G184900 Sobic002G308700 Sobic002G308700 Sobic009G255700--Sobic002G308700 Sobic002G335600 Sobic002G335600 Sobic009G255700--Sobic002G335600 Sobic009G255700--Sobic004G244900 Sobic006G064100 Sobic006G064100 Sobic003G418100--Sobic006G064100 Sobic010G205100 Sobic010G205100 Sobic003G418100--Sobic010G205100 Sobic003G418100--Sobic001G305600 Sobic008G001900 Sobic008G001900 Sobic003G418100--Sobic008G001900 Sobic002G305000 Sobic002G305000 Sobic003G418100--Sobic002G305000 Sobic003G011300 Sobic003G011300 Sobic003G418100--Sobic003G011300 Sobic001G531500 Sobic001G531500 Sobic003G418100--Sobic001G531500 Sobic003G354600 Sobic003G354600 Sobic003G418100--Sobic003G354600 Sobic001G073900 Sobic001G073900 Sobic003G418100--Sobic001G073900 Sobic003G155100 Sobic003G155100 Sobic008G001200--Sobic003G155100 Sobic010G206900 Sobic010G206900 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic008G001200--Sobic003G205200 Sobic010G010700 Sobic010G010700 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic008G001200--Sobic005G001000 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic004G347800 Sobic004G347800 Sobic001G305600--Sobic004G347800 Sobic005G045000 Sobic005G045000 Sobic001G305600--Sobic005G045000 Sobic001G305600--Sobic006G064100 Sobic002G273300 Sobic002G273300 Sobic001G305600--Sobic002G273300 Sobic001G484400 Sobic001G484400 Sobic001G305600--Sobic001G484400 Sobic008G168300 Sobic008G168300 Sobic001G305600--Sobic008G168300 Sobic001G305600--Sobic001G531500 Sobic001G305600--Sobic003G418100 Sobic010G176200 Sobic010G176200 Sobic001G305600--Sobic010G176200 Sobic003G247500--Sobic001G194200 Sobic003G247500--Sobic008G001200 Sobic003G247500--Sobic001G375100 Sobic003G247500--Sobic010G010700 Sobic006G055200 Sobic006G055200 Sobic003G247500--Sobic006G055200 Sobic001G454500 Sobic001G454500 Sobic003G247500--Sobic001G454500 Sobic010G123600 Sobic010G123600 Sobic003G247500--Sobic010G123600 Sobic003G247500--Sobic002G325300 Sobic003G247500--Sobic005G001000 Sobic007G172200 Sobic007G172200 Sobic006G126500--Sobic007G172200 Sobic006G204900 Sobic006G204900 Sobic006G126500--Sobic006G204900 Sobic007G075400 Sobic007G075400 Sobic006G126500--Sobic007G075400 Sobic010G072400 Sobic010G072400 Sobic006G126500--Sobic010G072400 Sobic006G126500--Sobic001G370900 Sobic004G331100 Sobic004G331100 Sobic006G126500--Sobic004G331100 Sobic007G088100 Sobic007G088100 Sobic006G126500--Sobic007G088100 Sobic004G269200 Sobic004G269200 Sobic006G126500--Sobic004G269200 Sobic001G375600 Sobic001G375600 Sobic006G126500--Sobic001G375600 Sobic001G375100--Sobic003G155100 Sobic001G375100--Sobic008G001200 Sobic005G149200 Sobic005G149200 Sobic001G375100--Sobic005G149200 Sobic001G375100--Sobic003G247500 Sobic001G375100--Sobic001G454500 Sobic001G375100--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic001G375100--Sobic002G008900 Sobic007G198300 Sobic007G198300 Sobic001G375100--Sobic007G198300 Sobic001G375100--Sobic005G001000
Octagon: transcription factors


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