Gene annotation
Transcriptome id Sobic.004G099400.1
Synonym
Functional annotation expressed protein
UniProt A0A194YNT3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g13540.1 : expressed protein
MaizeGDB (Corn) Zm00025a034522
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G222000 LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.009G135400 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.002G141800 expressed protein -
4 Sobic.004G222700 Photosystem II calcium ion binding protein (Os)(PubMedID : 27208977)@expressed protein -
5 Sobic.002G366500 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
6 Sobic.006G185000 expressed protein -
7 Sobic.009G116700 "dehydrin SbDHN1, maps into mapped into a stay green mQTL (QSTG meta1.9)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@rab16/17 homolog(PubMedID : 15579713)@dehydrin, putative, expressed -
8 Sobic.003G244100 "ABA-Responsive Element (ABRE) -binding factor BZ-1 basic-leucine zipper, maped into a stay green QTL (QSTG12_3"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@transcription factor, putative, expressed K09060: plant G-box-binding factor
9 Sobic.003G424600 - -
10 Sobic.002G316900 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
11 Sobic.005G224500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@xylanase inhibitor, putative, expressed -
12 Sobic.007G109800 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
13 Sobic.001G012700 regulatory protein, putative, expressed -
14 Sobic.003G011400 similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
15 Sobic.004G232300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
16 Sobic.005G116500 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
17 Sobic.004G043301 - -
18 Sobic.003G134900 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
20 Sobic.009G081700 C4-dicarboxylate transporter/malic acid transport protein, expressed -


Gene co-expression network
sample Sobic004G099400 Sobic004G099400 Sobic009G222000 Sobic009G222000 Sobic004G099400--Sobic009G222000 Sobic009G135400 Sobic009G135400 Sobic004G099400--Sobic009G135400 Sobic002G141800 Sobic002G141800 Sobic004G099400--Sobic002G141800 Sobic004G222700 Sobic004G222700 Sobic004G099400--Sobic004G222700 Sobic002G366500 Sobic002G366500 Sobic004G099400--Sobic002G366500 Sobic006G185000 Sobic006G185000 Sobic004G099400--Sobic006G185000 Sobic009G116700 Sobic009G116700 Sobic004G099400--Sobic009G116700 Sobic003G244100 Sobic003G244100 Sobic004G099400--Sobic003G244100 Sobic003G424600 Sobic003G424600 Sobic004G099400--Sobic003G424600 Sobic009G222000--Sobic002G366500 Sobic005G224500 Sobic005G224500 Sobic009G222000--Sobic005G224500 Sobic006G074300 Sobic006G074300 Sobic009G222000--Sobic006G074300 Sobic004G232300 Sobic004G232300 Sobic009G222000--Sobic004G232300 Sobic009G222000--Sobic002G141800 Sobic009G222000--Sobic003G244100 Sobic005G116500 Sobic005G116500 Sobic009G222000--Sobic005G116500 Sobic008G091557 Sobic008G091557 Sobic009G222000--Sobic008G091557 Sobic009G222000--Sobic009G116700 Sobic004G074100 Sobic004G074100 Sobic009G135400--Sobic004G074100 Sobic009G135400--Sobic004G222700 Sobic002G372100 Sobic002G372100 Sobic009G135400--Sobic002G372100 Sobic009G135400--Sobic004G099400 Sobic006G241000 Sobic006G241000 Sobic009G135400--Sobic006G241000 Sobic005G119300 Sobic005G119300 Sobic009G135400--Sobic005G119300 Sobic006G078000 Sobic006G078000 Sobic009G135400--Sobic006G078000 Sobic003G330400 Sobic003G330400 Sobic009G135400--Sobic003G330400 Sobic009G135400--Sobic006G185000 Sobic002G141800--Sobic009G116700 Sobic002G141800--Sobic003G244100 Sobic003G011400 Sobic003G011400 Sobic002G141800--Sobic003G011400 Sobic009G046200 Sobic009G046200 Sobic002G141800--Sobic009G046200 Sobic007G164500 Sobic007G164500 Sobic002G141800--Sobic007G164500 Sobic001G373600 Sobic001G373600 Sobic002G141800--Sobic001G373600 Sobic003G024600 Sobic003G024600 Sobic002G141800--Sobic003G024600 Sobic001G323600 Sobic001G323600 Sobic002G141800--Sobic001G323600 Sobic001G466450 Sobic001G466450 Sobic002G141800--Sobic001G466450 Sobic007G058600 Sobic007G058600 Sobic004G222700--Sobic007G058600 Sobic009G015500 Sobic009G015500 Sobic004G222700--Sobic009G015500 Sobic001G452200 Sobic001G452200 Sobic004G222700--Sobic001G452200 Sobic010G070750 Sobic010G070750 Sobic004G222700--Sobic010G070750 Sobic006G142000 Sobic006G142000 Sobic004G222700--Sobic006G142000 Sobic006G181900 Sobic006G181900 Sobic004G222700--Sobic006G181900 Sobic009G158600 Sobic009G158600 Sobic004G222700--Sobic009G158600 Sobic003G015200 Sobic003G015200 Sobic004G222700--Sobic003G015200 Sobic004G222700--Sobic001G323600 Sobic002G366500--Sobic006G074300 Sobic002G366500--Sobic009G222000 Sobic002G366500--Sobic005G116500 Sobic007G195300 Sobic007G195300 Sobic002G366500--Sobic007G195300 Sobic002G366500--Sobic005G224500 Sobic002G278800 Sobic002G278800 Sobic002G366500--Sobic002G278800 Sobic002G278700 Sobic002G278700 Sobic002G366500--Sobic002G278700 Sobic003G131800 Sobic003G131800 Sobic002G366500--Sobic003G131800 Sobic008G136500 Sobic008G136500 Sobic002G366500--Sobic008G136500 Sobic003G186132 Sobic003G186132 Sobic006G185000--Sobic003G186132 Sobic006G185000--Sobic006G078000 Sobic008G161900 Sobic008G161900 Sobic006G185000--Sobic008G161900 Sobic009G036500 Sobic009G036500 Sobic006G185000--Sobic009G036500 Sobic008G077100 Sobic008G077100 Sobic006G185000--Sobic008G077100 Sobic003G251800 Sobic003G251800 Sobic006G185000--Sobic003G251800 Sobic001G385200 Sobic001G385200 Sobic006G185000--Sobic001G385200 Sobic006G009800 Sobic006G009800 Sobic006G185000--Sobic006G009800 Sobic004G132900 Sobic004G132900 Sobic006G185000--Sobic004G132900 Sobic009G116700--Sobic002G141800 Sobic009G116700--Sobic003G011400 Sobic009G116700--Sobic009G046200 Sobic009G116700--Sobic007G164500 Sobic009G116700--Sobic001G373600 Sobic009G116700--Sobic001G466450 Sobic003G244100--Sobic002G141800 Sobic003G244100--Sobic009G116700 Sobic003G244100--Sobic009G046200 Sobic001G409400 Sobic001G409400 Sobic003G244100--Sobic001G409400 Sobic006G104000 Sobic006G104000 Sobic003G244100--Sobic006G104000 Sobic003G244100--Sobic003G011400 Sobic002G097000 Sobic002G097000 Sobic003G244100--Sobic002G097000 Sobic003G244100--Sobic001G373600 Sobic003G244100--Sobic001G466450 Sobic003G424600--Sobic006G104000 Sobic003G424600--Sobic009G046200 Sobic003G424600--Sobic003G024600 Sobic003G424600--Sobic002G141800 Sobic003G424600--Sobic001G409400 Sobic003G424600--Sobic001G373600 Sobic003G424600--Sobic007G164500 Sobic003G424600--Sobic001G466450
Octagon: transcription factors


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