Gene annotation
Transcriptome id Sobic.004G160500.1
Synonym Sb04g021260
Functional annotation expressed protein
UniProt C5XTA4
Pfam PF05553
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g31840.1 : expressed protein
MaizeGDB (Corn) Zm00025a020491
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
2 Sobic.004G108800 cytochrome P450, putative, expressed -
3 Sobic.007G038500 aquaporin protein, putative, expressed K09874: aquaporin NIP
4 Sobic.005G149600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
5 Sobic.005G089200 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.009G015166 - -
7 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.010G274400 reticuline oxidase-like protein precursor, putative, expressed -
9 Sobic.004G156250 - -
10 Sobic.002G163200 - -
11 Sobic.005G152500 - -
12 Sobic.003G015200 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
13 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.007G087400 amino acid transporter, putative, expressed -
15 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
16 Sobic.007G172500 zinc finger family protein, putative, expressed -
17 Sobic.008G133000 expressed protein -
18 Sobic.001G506600 exostosin family domain containing protein, expressed -
19 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
20 Sobic.010G170300 Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase


Gene co-expression network
sample Sobic004G160500 Sobic004G160500 Sobic006G117500 Sobic006G117500 Sobic004G160500--Sobic006G117500 Sobic004G108800 Sobic004G108800 Sobic004G160500--Sobic004G108800 Sobic007G038500 Sobic007G038500 Sobic004G160500--Sobic007G038500 Sobic005G149600 Sobic005G149600 Sobic004G160500--Sobic005G149600 Sobic005G089200 Sobic005G089200 Sobic004G160500--Sobic005G089200 Sobic009G015166 Sobic009G015166 Sobic004G160500--Sobic009G015166 Sobic005G104200 Sobic005G104200 Sobic004G160500--Sobic005G104200 Sobic010G274400 Sobic010G274400 Sobic004G160500--Sobic010G274400 Sobic004G156250 Sobic004G156250 Sobic004G160500--Sobic004G156250 Sobic006G117500--Sobic005G104200 Sobic006G117500--Sobic010G274400 Sobic006G117500--Sobic004G108800 Sobic001G506600 Sobic001G506600 Sobic006G117500--Sobic001G506600 Sobic006G117500--Sobic009G015166 Sobic005G066300 Sobic005G066300 Sobic006G117500--Sobic005G066300 Sobic010G096700 Sobic010G096700 Sobic006G117500--Sobic010G096700 Sobic006G205500 Sobic006G205500 Sobic006G117500--Sobic006G205500 Sobic002G163200 Sobic002G163200 Sobic006G117500--Sobic002G163200 Sobic004G108800--Sobic005G149600 Sobic004G108800--Sobic005G089200 Sobic007G156800 Sobic007G156800 Sobic004G108800--Sobic007G156800 Sobic004G108800--Sobic006G117500 Sobic004G108800--Sobic004G156250 Sobic003G015200 Sobic003G015200 Sobic004G108800--Sobic003G015200 Sobic004G108800--Sobic009G015166 Sobic005G152500 Sobic005G152500 Sobic004G108800--Sobic005G152500 Sobic004G108800--Sobic007G038500 Sobic007G038500--Sobic004G108800 Sobic007G038500--Sobic007G156800 Sobic007G038500--Sobic009G015166 Sobic008G108950 Sobic008G108950 Sobic007G038500--Sobic008G108950 Sobic005G064900 Sobic005G064900 Sobic007G038500--Sobic005G064900 Sobic007G038500--Sobic004G156250 Sobic007G038500--Sobic005G149600 Sobic007G038500--Sobic005G089200 Sobic007G038500--Sobic003G015200 Sobic005G149600--Sobic005G089200 Sobic005G149600--Sobic004G108800 Sobic001G026300 Sobic001G026300 Sobic005G149600--Sobic001G026300 Sobic005G149600--Sobic003G015200 Sobic005G149600--Sobic006G117500 Sobic005G149600--Sobic004G156250 Sobic005G149600--Sobic005G152500 Sobic005G149600--Sobic007G156800 Sobic004G034200 Sobic004G034200 Sobic005G149600--Sobic004G034200 Sobic005G089200--Sobic005G149600 Sobic005G089200--Sobic004G108800 Sobic005G089200--Sobic001G026300 Sobic005G089200--Sobic005G152500 Sobic005G089200--Sobic003G015200 Sobic005G089200--Sobic006G117500 Sobic010G170300 Sobic010G170300 Sobic005G089200--Sobic010G170300 Sobic005G089200--Sobic007G156800 Sobic005G089200--Sobic004G034200 Sobic001G238500 Sobic001G238500 Sobic009G015166--Sobic001G238500 Sobic009G015166--Sobic006G117500 Sobic009G015166--Sobic005G066300 Sobic009G015166--Sobic004G108800 Sobic009G015166--Sobic005G104200 Sobic004G126500 Sobic004G126500 Sobic009G015166--Sobic004G126500 Sobic002G411000 Sobic002G411000 Sobic009G015166--Sobic002G411000 Sobic009G015166--Sobic004G156250 Sobic006G009700 Sobic006G009700 Sobic009G015166--Sobic006G009700 Sobic005G104200--Sobic001G238500 Sobic005G104200--Sobic001G506600 Sobic002G019100 Sobic002G019100 Sobic005G104200--Sobic002G019100 Sobic001G503000 Sobic001G503000 Sobic005G104200--Sobic001G503000 Sobic005G104200--Sobic006G117500 Sobic005G104200--Sobic004G126500 Sobic005G104200--Sobic006G009700 Sobic005G104200--Sobic002G411000 Sobic001G348800 Sobic001G348800 Sobic005G104200--Sobic001G348800 Sobic010G274400--Sobic002G411000 Sobic010G274400--Sobic005G104200 Sobic010G274400--Sobic006G117500 Sobic010G274400--Sobic001G506600 Sobic010G274400--Sobic005G066300 Sobic010G274400--Sobic001G503000 Sobic010G274400--Sobic010G096700 Sobic006G108300 Sobic006G108300 Sobic010G274400--Sobic006G108300 Sobic001G506700 Sobic001G506700 Sobic010G274400--Sobic001G506700 Sobic004G156250--Sobic004G108800 Sobic004G156250--Sobic005G104200 Sobic004G156250--Sobic001G238500 Sobic004G156250--Sobic005G149600 Sobic001G131001 Sobic001G131001 Sobic004G156250--Sobic001G131001 Sobic004G156250--Sobic004G126500 Sobic004G156250--Sobic009G015166 Sobic004G156250--Sobic006G117500 Sobic004G156250--Sobic005G089200
Octagon: transcription factors


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