Gene annotation
Transcriptome id Sobic.004G187200.1
Synonym MC9, AtMC9, Sb04g023560
Functional annotation ICE-like protease p20 domain containing protein, putative, expressed
UniProt C5XVL4
Pfam PF00656
Panther DB PTHR31810 PTHR31810:SF2
NCBI CDD KOG1546; Metacaspase involved in regulation of apoptosis
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004197cysteine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G04200 : metacaspase 9
RAP-DB (Rice) LOC_Os11g04010.1 : ICE-like protease p20 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a033394
Brachypodium KQK05598
Barley HORVU5Hr1G044610.4 , HORVU5Hr1G044610.2 , HORVU5Hr1G044610.3 , HORVU5Hr1G044610.1
Wheat -
Populus -


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cDNA sequences
Sobic.004G187200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G234000 expressed protein -
2 Sobic.004G090300 OsFBX46 - F-box domain containing protein, expressed -
3 Sobic.009G029900 C4-dicarboxylate transporter/malic acid transport protein, expressed -
4 Sobic.004G090200 OsFBX46 - F-box domain containing protein, expressed -
5 Sobic.002G147500 early fruit mRNA, putative, expressed -
6 Sobic.006G279000 expressed protein -
7 Sobic.007G064400 glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
8 Sobic.001G330600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.001G530400 expressed protein -
10 Sobic.002G291132 - -
11 Sobic.006G036201 - -
12 Sobic.002G211501 - -
13 Sobic.006G011800 - -
14 Sobic.009G013200 - -
15 Sobic.009G086800 no apical meristem protein, putative, expressed -
16 Sobic.005G074900 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.007G147300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
18 Sobic.007G123000 sex determination protein tasselseed-2, putative, expressed -
19 Sobic.009G041301 - -
20 Sobic.003G363300 hydrolase, alpha/beta fold family protein, putative, expressed -


Gene co-expression network
sample Sobic004G187200 Sobic004G187200 Sobic001G234000 Sobic001G234000 Sobic004G187200--Sobic001G234000 Sobic004G090300 Sobic004G090300 Sobic004G187200--Sobic004G090300 Sobic009G029900 Sobic009G029900 Sobic004G187200--Sobic009G029900 Sobic004G090200 Sobic004G090200 Sobic004G187200--Sobic004G090200 Sobic002G147500 Sobic002G147500 Sobic004G187200--Sobic002G147500 Sobic006G279000 Sobic006G279000 Sobic004G187200--Sobic006G279000 Sobic007G064400 Sobic007G064400 Sobic004G187200--Sobic007G064400 Sobic001G330600 Sobic001G330600 Sobic004G187200--Sobic001G330600 Sobic001G530400 Sobic001G530400 Sobic004G187200--Sobic001G530400 Sobic002G211501 Sobic002G211501 Sobic001G234000--Sobic002G211501 Sobic001G234000--Sobic004G090300 Sobic001G234000--Sobic007G064400 Sobic001G234000--Sobic006G279000 Sobic001G234000--Sobic004G187200 Sobic002G291132 Sobic002G291132 Sobic001G234000--Sobic002G291132 Sobic001G234000--Sobic001G530400 Sobic001G234000--Sobic002G147500 Sobic010G274300 Sobic010G274300 Sobic001G234000--Sobic010G274300 Sobic004G090300--Sobic006G279000 Sobic004G090300--Sobic001G234000 Sobic004G090300--Sobic002G147500 Sobic004G090300--Sobic002G291132 Sobic004G090300--Sobic001G530400 Sobic004G090300--Sobic004G187200 Sobic004G090300--Sobic002G211501 Sobic004G090300--Sobic001G330600 Sobic006G036201 Sobic006G036201 Sobic004G090300--Sobic006G036201 Sobic009G029900--Sobic004G187200 Sobic009G029900--Sobic001G530400 Sobic009G029900--Sobic001G234000 Sobic009G029900--Sobic004G090300 Sobic006G011800 Sobic006G011800 Sobic009G029900--Sobic006G011800 Sobic009G029900--Sobic006G279000 Sobic009G029900--Sobic007G064400 Sobic009G029900--Sobic004G090200 Sobic009G041301 Sobic009G041301 Sobic009G029900--Sobic009G041301 Sobic004G090200--Sobic001G330600 Sobic004G090200--Sobic002G147500 Sobic005G052100 Sobic005G052100 Sobic004G090200--Sobic005G052100 Sobic004G090200--Sobic004G187200 Sobic004G090200--Sobic006G279000 Sobic009G013200 Sobic009G013200 Sobic004G090200--Sobic009G013200 Sobic001G112350 Sobic001G112350 Sobic004G090200--Sobic001G112350 Sobic007G069800 Sobic007G069800 Sobic004G090200--Sobic007G069800 Sobic004G090200--Sobic004G090300 Sobic002G147500--Sobic001G330600 Sobic002G147500--Sobic009G013200 Sobic007G147300 Sobic007G147300 Sobic002G147500--Sobic007G147300 Sobic002G147500--Sobic006G279000 Sobic007G122932 Sobic007G122932 Sobic002G147500--Sobic007G122932 Sobic007G123000 Sobic007G123000 Sobic002G147500--Sobic007G123000 Sobic005G075000 Sobic005G075000 Sobic002G147500--Sobic005G075000 Sobic009G086800 Sobic009G086800 Sobic002G147500--Sobic009G086800 Sobic010G209300 Sobic010G209300 Sobic002G147500--Sobic010G209300 Sobic006G279000--Sobic002G147500 Sobic006G279000--Sobic004G090300 Sobic006G279000--Sobic001G330600 Sobic006G279000--Sobic006G036201 Sobic005G074900 Sobic005G074900 Sobic006G279000--Sobic005G074900 Sobic003G363300 Sobic003G363300 Sobic006G279000--Sobic003G363300 Sobic006G279000--Sobic005G075000 Sobic006G271400 Sobic006G271400 Sobic006G279000--Sobic006G271400 Sobic006G279000--Sobic001G234000 Sobic007G064400--Sobic001G234000 Sobic007G064400--Sobic004G187200 Sobic007G064400--Sobic004G090300 Sobic007G064400--Sobic006G279000 Sobic007G064400--Sobic004G090200 Sobic002G059100 Sobic002G059100 Sobic007G064400--Sobic002G059100 Sobic007G156400 Sobic007G156400 Sobic007G064400--Sobic007G156400 Sobic001G297300 Sobic001G297300 Sobic007G064400--Sobic001G297300 Sobic007G064400--Sobic002G147500 Sobic001G330600--Sobic002G147500 Sobic001G330600--Sobic009G013200 Sobic001G330600--Sobic007G122932 Sobic001G330600--Sobic007G147300 Sobic001G330600--Sobic007G123000 Sobic001G330600--Sobic005G075000 Sobic001G330600--Sobic006G279000 Sobic001G330600--Sobic010G209300 Sobic009G021300 Sobic009G021300 Sobic001G330600--Sobic009G021300 Sobic001G530400--Sobic002G291132 Sobic001G530400--Sobic006G036201 Sobic009G061800 Sobic009G061800 Sobic001G530400--Sobic009G061800 Sobic001G530400--Sobic002G211501 Sobic001G530400--Sobic004G090300 Sobic001G530400--Sobic005G074900 Sobic001G530400--Sobic009G086800 Sobic001G530400--Sobic001G234000 Sobic009G051301 Sobic009G051301 Sobic001G530400--Sobic009G051301
Octagon: transcription factors


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