Gene annotation
Transcriptome id Sobic.009G029900.2
Synonym SLAH2, Sb09g002500
Functional annotation C4-dicarboxylate transporter/malic acid transport protein, expressed
UniProt A0A1Z5R1V6
Pfam PF03595
Panther DB PTHR31269 PTHR31269:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0008308voltage-gated anion channel activity GO:0006873cellular ion homeostasis


Orthologs (automatic annotation)
TAIR AT4G27970 : SLAC1 homologue 2
RAP-DB (Rice) LOC_Os01g43460.2 : C4-dicarboxylate transporter/malic acid transport protein, expressed
MaizeGDB (Corn) Zm00025a038583 , Zm00025a037581 , Zm00025a036732 , Zm00025a043265 , Zm00025a025514 , Zm00025a028368
Brachypodium KQK03387
Barley HORVU3Hr1G030840.2 , HORVU3Hr1G030840.1 , HORVU3Hr1G030840.3
Wheat TraesCS1D02G433200 , TraesCS3D02G159600 , TraesCS1B02G147400 , TraesCS3B02G178600 , TraesCS3D02G228400 , TraesCS3A02G028100 , TraesCS3A02G151400 , TraesCS3A02G225100 , TraesCS3B02G254700 , TraesCS1B02G456400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G187200 ICE-like protease p20 domain containing protein, putative, expressed -
2 Sobic.001G530400 expressed protein -
3 Sobic.001G234000 expressed protein -
4 Sobic.004G090300 OsFBX46 - F-box domain containing protein, expressed -
5 Sobic.006G011800 - -
6 Sobic.006G279000 expressed protein -
7 Sobic.007G064400 glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
8 Sobic.004G090200 OsFBX46 - F-box domain containing protein, expressed -
9 Sobic.009G041301 - -
10 Sobic.006G036201 - -
11 Sobic.005G191350 - K13963: serpin B
12 Sobic.002G147500 early fruit mRNA, putative, expressed -
13 Sobic.002G291132 - -
14 Sobic.005G074900 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.002G211501 - -
16 Sobic.001G330600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
17 Sobic.008G140500 expressed protein -
18 Sobic.009G051301 - -
19 Sobic.003G363300 hydrolase, alpha/beta fold family protein, putative, expressed -
20 Sobic.008G011400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2


Gene co-expression network
sample Sobic009G029900 Sobic009G029900 Sobic004G187200 Sobic004G187200 Sobic009G029900--Sobic004G187200 Sobic001G530400 Sobic001G530400 Sobic009G029900--Sobic001G530400 Sobic001G234000 Sobic001G234000 Sobic009G029900--Sobic001G234000 Sobic004G090300 Sobic004G090300 Sobic009G029900--Sobic004G090300 Sobic006G011800 Sobic006G011800 Sobic009G029900--Sobic006G011800 Sobic006G279000 Sobic006G279000 Sobic009G029900--Sobic006G279000 Sobic007G064400 Sobic007G064400 Sobic009G029900--Sobic007G064400 Sobic004G090200 Sobic004G090200 Sobic009G029900--Sobic004G090200 Sobic009G041301 Sobic009G041301 Sobic009G029900--Sobic009G041301 Sobic004G187200--Sobic001G234000 Sobic004G187200--Sobic004G090300 Sobic004G187200--Sobic009G029900 Sobic004G187200--Sobic004G090200 Sobic002G147500 Sobic002G147500 Sobic004G187200--Sobic002G147500 Sobic004G187200--Sobic006G279000 Sobic004G187200--Sobic007G064400 Sobic001G330600 Sobic001G330600 Sobic004G187200--Sobic001G330600 Sobic004G187200--Sobic001G530400 Sobic002G291132 Sobic002G291132 Sobic001G530400--Sobic002G291132 Sobic006G036201 Sobic006G036201 Sobic001G530400--Sobic006G036201 Sobic009G061800 Sobic009G061800 Sobic001G530400--Sobic009G061800 Sobic002G211501 Sobic002G211501 Sobic001G530400--Sobic002G211501 Sobic001G530400--Sobic004G090300 Sobic005G074900 Sobic005G074900 Sobic001G530400--Sobic005G074900 Sobic009G086800 Sobic009G086800 Sobic001G530400--Sobic009G086800 Sobic001G530400--Sobic001G234000 Sobic009G051301 Sobic009G051301 Sobic001G530400--Sobic009G051301 Sobic001G234000--Sobic002G211501 Sobic001G234000--Sobic004G090300 Sobic001G234000--Sobic007G064400 Sobic001G234000--Sobic006G279000 Sobic001G234000--Sobic004G187200 Sobic001G234000--Sobic002G291132 Sobic001G234000--Sobic001G530400 Sobic001G234000--Sobic002G147500 Sobic010G274300 Sobic010G274300 Sobic001G234000--Sobic010G274300 Sobic004G090300--Sobic006G279000 Sobic004G090300--Sobic001G234000 Sobic004G090300--Sobic002G147500 Sobic004G090300--Sobic002G291132 Sobic004G090300--Sobic001G530400 Sobic004G090300--Sobic004G187200 Sobic004G090300--Sobic002G211501 Sobic004G090300--Sobic001G330600 Sobic004G090300--Sobic006G036201 Sobic006G011800--Sobic009G029900 Sobic006G011800--Sobic004G187200 Sobic006G011800--Sobic004G090200 Sobic006G011800--Sobic004G090300 Sobic006G011800--Sobic001G234000 Sobic006G011800--Sobic001G530400 Sobic006G011800--Sobic007G064400 Sobic005G191350 Sobic005G191350 Sobic006G011800--Sobic005G191350 Sobic006G011800--Sobic009G041301 Sobic006G279000--Sobic002G147500 Sobic006G279000--Sobic004G090300 Sobic006G279000--Sobic001G330600 Sobic006G279000--Sobic006G036201 Sobic006G279000--Sobic005G074900 Sobic003G363300 Sobic003G363300 Sobic006G279000--Sobic003G363300 Sobic005G075000 Sobic005G075000 Sobic006G279000--Sobic005G075000 Sobic006G271400 Sobic006G271400 Sobic006G279000--Sobic006G271400 Sobic006G279000--Sobic001G234000 Sobic007G064400--Sobic001G234000 Sobic007G064400--Sobic004G187200 Sobic007G064400--Sobic004G090300 Sobic007G064400--Sobic006G279000 Sobic007G064400--Sobic004G090200 Sobic002G059100 Sobic002G059100 Sobic007G064400--Sobic002G059100 Sobic007G156400 Sobic007G156400 Sobic007G064400--Sobic007G156400 Sobic001G297300 Sobic001G297300 Sobic007G064400--Sobic001G297300 Sobic007G064400--Sobic002G147500 Sobic004G090200--Sobic001G330600 Sobic004G090200--Sobic002G147500 Sobic005G052100 Sobic005G052100 Sobic004G090200--Sobic005G052100 Sobic004G090200--Sobic004G187200 Sobic004G090200--Sobic006G279000 Sobic009G013200 Sobic009G013200 Sobic004G090200--Sobic009G013200 Sobic001G112350 Sobic001G112350 Sobic004G090200--Sobic001G112350 Sobic007G069800 Sobic007G069800 Sobic004G090200--Sobic007G069800 Sobic004G090200--Sobic004G090300 Sobic004G068000 Sobic004G068000 Sobic009G041301--Sobic004G068000 Sobic009G041301--Sobic001G234000 Sobic009G041301--Sobic001G530400 Sobic009G041301--Sobic009G029900 Sobic004G105300 Sobic004G105300 Sobic009G041301--Sobic004G105300 Sobic003G302466 Sobic003G302466 Sobic009G041301--Sobic003G302466 Sobic010G198700 Sobic010G198700 Sobic009G041301--Sobic010G198700 Sobic009G041301--Sobic004G187200 Sobic009G041301--Sobic004G090300
Octagon: transcription factors


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