Gene annotation
Transcriptome id Sobic.004G223100.1
Synonym ARR3, Type-A response regulator 3, ARR3, Sb04g026750
Functional annotation Decreased expression in phyB-1 mutant (PubMedID : 26893475)
response regulator receiver domain containing protein, expressed
UniProt C5XY52
Pfam PF00072
Panther DB PTHR26402 PTHR26402:SF566
NCBI CDD -
KEGG Orthology K14492; two-component response regulator ARR-A family
Gene Ontology GO:0000160; phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT1G10470 : response regulator 4
RAP-DB (Rice) LOC_Os02g42060.1 : response regulator receiver domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021063 , Zm00025a045832 , Zm00025a010625
Brachypodium KQK00441
Barley HORVU2Hr1G090270.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G226600 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.010G048000 expressed protein -
3 Sobic.002G157400 ankyrin, putative, expressed -
4 Sobic.001G152400 expressed protein -
5 Sobic.002G067500 ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
6 Sobic.003G140100 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.004G062100 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL5 - SBP-box gene family member, expressed -
8 Sobic.001G472400 pumilio domain-containing protein PPD1, putative, expressed -
9 Sobic.003G271700 - -
10 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
11 Sobic.010G053500 expressed protein -
12 Sobic.009G046000 desiccation-related protein PCC13-62 precursor, putative, expressed -
13 Sobic.007G049600 expressed protein -
14 Sobic.005G164000 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
15 Sobic.002G251200 dihydroflavonol-4-reductase, putative, expressed -
16 Sobic.001G438500 POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
17 Sobic.007G029900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.005G226500 thaumatin family domain containing protein, expressed -
19 Sobic.001G334501 - K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
20 Sobic.006G267400 CRP2 - Cysteine-rich family protein precursor, expressed -


Gene co-expression network
sample Sobic004G223100 Sobic004G223100 Sobic005G226600 Sobic005G226600 Sobic004G223100--Sobic005G226600 Sobic010G048000 Sobic010G048000 Sobic004G223100--Sobic010G048000 Sobic002G157400 Sobic002G157400 Sobic004G223100--Sobic002G157400 Sobic001G152400 Sobic001G152400 Sobic004G223100--Sobic001G152400 Sobic002G067500 Sobic002G067500 Sobic004G223100--Sobic002G067500 Sobic003G140100 Sobic003G140100 Sobic004G223100--Sobic003G140100 Sobic004G062100 Sobic004G062100 Sobic004G223100--Sobic004G062100 Sobic001G472400 Sobic001G472400 Sobic004G223100--Sobic001G472400 Sobic003G271700 Sobic003G271700 Sobic004G223100--Sobic003G271700 Sobic005G226600--Sobic010G048000 Sobic005G226600--Sobic003G271700 Sobic005G226600--Sobic001G472400 Sobic006G079500 Sobic006G079500 Sobic005G226600--Sobic006G079500 Sobic009G046000 Sobic009G046000 Sobic005G226600--Sobic009G046000 Sobic005G226500 Sobic005G226500 Sobic005G226600--Sobic005G226500 Sobic004G318800 Sobic004G318800 Sobic005G226600--Sobic004G318800 Sobic007G206000 Sobic007G206000 Sobic005G226600--Sobic007G206000 Sobic007G048500 Sobic007G048500 Sobic005G226600--Sobic007G048500 Sobic010G048000--Sobic001G472400 Sobic001G102600 Sobic001G102600 Sobic010G048000--Sobic001G102600 Sobic010G189366 Sobic010G189366 Sobic010G048000--Sobic010G189366 Sobic004G349150 Sobic004G349150 Sobic010G048000--Sobic004G349150 Sobic010G048000--Sobic009G046000 Sobic006G267400 Sobic006G267400 Sobic010G048000--Sobic006G267400 Sobic004G001700 Sobic004G001700 Sobic010G048000--Sobic004G001700 Sobic010G187400 Sobic010G187400 Sobic010G048000--Sobic010G187400 Sobic005G090000 Sobic005G090000 Sobic010G048000--Sobic005G090000 Sobic010G053500 Sobic010G053500 Sobic002G157400--Sobic010G053500 Sobic002G157400--Sobic003G140100 Sobic007G049600 Sobic007G049600 Sobic002G157400--Sobic007G049600 Sobic001G428300 Sobic001G428300 Sobic002G157400--Sobic001G428300 Sobic002G360801 Sobic002G360801 Sobic002G157400--Sobic002G360801 Sobic008G016500 Sobic008G016500 Sobic002G157400--Sobic008G016500 Sobic002G157400--Sobic005G226600 Sobic002G157400--Sobic004G223100 Sobic005G164000 Sobic005G164000 Sobic002G157400--Sobic005G164000 Sobic001G152400--Sobic009G046000 Sobic010G049600 Sobic010G049600 Sobic001G152400--Sobic010G049600 Sobic005G200700 Sobic005G200700 Sobic001G152400--Sobic005G200700 Sobic010G215700 Sobic010G215700 Sobic001G152400--Sobic010G215700 Sobic001G491400 Sobic001G491400 Sobic001G152400--Sobic001G491400 Sobic001G366000 Sobic001G366000 Sobic001G152400--Sobic001G366000 Sobic007G029900 Sobic007G029900 Sobic001G152400--Sobic007G029900 Sobic007G000600 Sobic007G000600 Sobic001G152400--Sobic007G000600 Sobic002G399600 Sobic002G399600 Sobic001G152400--Sobic002G399600 Sobic002G067500--Sobic010G215700 Sobic002G067500--Sobic004G062100 Sobic002G251200 Sobic002G251200 Sobic002G067500--Sobic002G251200 Sobic010G053300 Sobic010G053300 Sobic002G067500--Sobic010G053300 Sobic009G075000 Sobic009G075000 Sobic002G067500--Sobic009G075000 Sobic002G067500--Sobic007G206000 Sobic005G042200 Sobic005G042200 Sobic002G067500--Sobic005G042200 Sobic010G062200 Sobic010G062200 Sobic002G067500--Sobic010G062200 Sobic003G088200 Sobic003G088200 Sobic002G067500--Sobic003G088200 Sobic003G140100--Sobic002G157400 Sobic003G140100--Sobic010G053500 Sobic003G140100--Sobic007G049600 Sobic003G140100--Sobic001G428300 Sobic003G140100--Sobic005G164000 Sobic003G140100--Sobic002G360801 Sobic003G140100--Sobic005G226600 Sobic003G140100--Sobic008G016500 Sobic003G140100--Sobic004G223100 Sobic004G062100--Sobic010G215700 Sobic001G438500 Sobic001G438500 Sobic004G062100--Sobic001G438500 Sobic004G062100--Sobic002G251200 Sobic001G334501 Sobic001G334501 Sobic004G062100--Sobic001G334501 Sobic001G438400 Sobic001G438400 Sobic004G062100--Sobic001G438400 Sobic004G062100--Sobic006G267400 Sobic005G089700 Sobic005G089700 Sobic004G062100--Sobic005G089700 Sobic007G037400 Sobic007G037400 Sobic004G062100--Sobic007G037400 Sobic006G006900 Sobic006G006900 Sobic004G062100--Sobic006G006900 Sobic001G472400--Sobic010G189366 Sobic001G472400--Sobic001G102600 Sobic001G472400--Sobic004G349150 Sobic001G472400--Sobic004G001700 Sobic001G472400--Sobic006G267400 Sobic001G472400--Sobic010G187400 Sobic010G259400 Sobic010G259400 Sobic001G472400--Sobic010G259400 Sobic004G202800 Sobic004G202800 Sobic001G472400--Sobic004G202800 Sobic008G032400 Sobic008G032400 Sobic001G472400--Sobic008G032400 Sobic003G271700--Sobic009G046000 Sobic006G089700 Sobic006G089700 Sobic003G271700--Sobic006G089700 Sobic003G271700--Sobic007G206000 Sobic010G236000 Sobic010G236000 Sobic003G271700--Sobic010G236000 Sobic003G271700--Sobic004G202800 Sobic002G410600 Sobic002G410600 Sobic003G271700--Sobic002G410600 Sobic003G271700--Sobic005G200700 Sobic003G038700 Sobic003G038700 Sobic003G271700--Sobic003G038700 Sobic006G006800 Sobic006G006800 Sobic003G271700--Sobic006G006800
Octagon: transcription factors


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