Gene annotation
Transcriptome id Sobic.004G234700.1
Synonym Sb04g027770
Functional annotation expressed protein
UniProt A0A1Z5RPP7
Pfam PF11250
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g51510.1 : expressed protein
MaizeGDB (Corn) Zm00025a033179
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G062000 - -
2 Sobic.005G068500 expressed protein -
3 Sobic.010G257700 peptidyl-prolyl cis-trans isomerase, putative, expressed -
4 Sobic.008G085050 - -
5 Sobic.008G168932 - -
6 Sobic.001G539940 - -
7 Sobic.001G539600 expansin precursor, putative, expressed -
8 Sobic.003G255400 glyoxal oxidase-related, putative, expressed -
9 Sobic.004G197200 fimbrin-like protein 2, putative, expressed -
10 Sobic.002G007900 - -
11 Sobic.008G099000 protein of unknown function domain containing protein, expressed -
12 Sobic.010G089900 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
13 Sobic.002G224000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
14 Sobic.010G141001 - -
15 Sobic.002G273200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
16 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.010G151575 - -
18 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
19 Sobic.004G222400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
20 Sobic.002G121800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13


Gene co-expression network
sample Sobic004G234700 Sobic004G234700 Sobic006G062000 Sobic006G062000 Sobic004G234700--Sobic006G062000 Sobic005G068500 Sobic005G068500 Sobic004G234700--Sobic005G068500 Sobic010G257700 Sobic010G257700 Sobic004G234700--Sobic010G257700 Sobic008G085050 Sobic008G085050 Sobic004G234700--Sobic008G085050 Sobic008G168932 Sobic008G168932 Sobic004G234700--Sobic008G168932 Sobic001G539940 Sobic001G539940 Sobic004G234700--Sobic001G539940 Sobic001G539600 Sobic001G539600 Sobic004G234700--Sobic001G539600 Sobic003G255400 Sobic003G255400 Sobic004G234700--Sobic003G255400 Sobic004G197200 Sobic004G197200 Sobic004G234700--Sobic004G197200 Sobic006G062000--Sobic008G085050 Sobic006G062000--Sobic001G539940 Sobic002G224000 Sobic002G224000 Sobic006G062000--Sobic002G224000 Sobic006G062000--Sobic004G197200 Sobic002G007900 Sobic002G007900 Sobic006G062000--Sobic002G007900 Sobic010G089900 Sobic010G089900 Sobic006G062000--Sobic010G089900 Sobic006G062000--Sobic001G539600 Sobic006G062000--Sobic003G255400 Sobic010G151575 Sobic010G151575 Sobic006G062000--Sobic010G151575 Sobic005G068500--Sobic008G168932 Sobic008G099000 Sobic008G099000 Sobic005G068500--Sobic008G099000 Sobic005G068500--Sobic001G539600 Sobic004G222400 Sobic004G222400 Sobic005G068500--Sobic004G222400 Sobic010G141001 Sobic010G141001 Sobic005G068500--Sobic010G141001 Sobic005G068500--Sobic003G255400 Sobic003G329600 Sobic003G329600 Sobic005G068500--Sobic003G329600 Sobic010G176400 Sobic010G176400 Sobic005G068500--Sobic010G176400 Sobic004G289900 Sobic004G289900 Sobic005G068500--Sobic004G289900 Sobic005G213000 Sobic005G213000 Sobic010G257700--Sobic005G213000 Sobic002G121800 Sobic002G121800 Sobic010G257700--Sobic002G121800 Sobic009G089800 Sobic009G089800 Sobic010G257700--Sobic009G089800 Sobic004G011800 Sobic004G011800 Sobic010G257700--Sobic004G011800 Sobic002G210700 Sobic002G210700 Sobic010G257700--Sobic002G210700 Sobic002G165900 Sobic002G165900 Sobic010G257700--Sobic002G165900 Sobic002G006700 Sobic002G006700 Sobic010G257700--Sobic002G006700 Sobic008G190300 Sobic008G190300 Sobic010G257700--Sobic008G190300 Sobic003G379100 Sobic003G379100 Sobic010G257700--Sobic003G379100 Sobic008G085050--Sobic010G141001 Sobic008G085050--Sobic003G255400 Sobic008G085050--Sobic004G222400 Sobic008G085050--Sobic001G539600 Sobic008G085050--Sobic003G329600 Sobic008G085050--Sobic010G176400 Sobic008G085050--Sobic008G099000 Sobic008G085050--Sobic010G089900 Sobic002G273200 Sobic002G273200 Sobic008G085050--Sobic002G273200 Sobic008G168932--Sobic004G289900 Sobic005G185750 Sobic005G185750 Sobic008G168932--Sobic005G185750 Sobic008G168932--Sobic005G068500 Sobic008G168932--Sobic008G099000 Sobic008G181900 Sobic008G181900 Sobic008G168932--Sobic008G181900 Sobic004G024800 Sobic004G024800 Sobic008G168932--Sobic004G024800 Sobic002G323000 Sobic002G323000 Sobic008G168932--Sobic002G323000 Sobic006G044800 Sobic006G044800 Sobic008G168932--Sobic006G044800 Sobic008G168932--Sobic004G222400 Sobic001G539940--Sobic002G007900 Sobic001G539940--Sobic002G224000 Sobic001G539940--Sobic004G197200 Sobic001G539940--Sobic010G151575 Sobic001G539940--Sobic010G089900 Sobic001G539940--Sobic001G539600 Sobic001G539940--Sobic002G273200 Sobic001G539940--Sobic003G255400 Sobic006G105500 Sobic006G105500 Sobic001G539940--Sobic006G105500 Sobic001G539600--Sobic003G255400 Sobic001G539600--Sobic003G329600 Sobic001G539600--Sobic010G141001 Sobic001G539600--Sobic010G176400 Sobic001G539600--Sobic010G089900 Sobic001G539600--Sobic002G273200 Sobic001G539600--Sobic004G222400 Sobic001G539600--Sobic001G539940 Sobic001G539600--Sobic008G099000 Sobic003G255400--Sobic001G539600 Sobic003G255400--Sobic010G141001 Sobic003G255400--Sobic003G329600 Sobic003G255400--Sobic010G176400 Sobic003G255400--Sobic004G222400 Sobic003G255400--Sobic010G089900 Sobic003G255400--Sobic002G273200 Sobic003G255400--Sobic008G099000 Sobic003G255400--Sobic001G539940 Sobic004G197200--Sobic002G007900 Sobic004G197200--Sobic002G224000 Sobic004G197200--Sobic001G539940 Sobic004G197200--Sobic010G151575 Sobic004G197200--Sobic002G121800 Sobic004G359900 Sobic004G359900 Sobic004G197200--Sobic004G359900 Sobic004G197200--Sobic006G105500 Sobic004G197200--Sobic010G089900 Sobic004G197200--Sobic002G273200
Octagon: transcription factors


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