Gene annotation
Transcriptome id Sobic.004G235851.1
Synonym -
Functional annotation -
UniProt A0A1Z5RNT4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G255200 - -
2 Sobic.004G046850 - -
3 Sobic.007G004600 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
4 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
5 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
6 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
7 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
8 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
9 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
10 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
11 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
12 Sobic.001G350200 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
13 Sobic.008G088400 - -
14 Sobic.009G251400 Acyl-protein thioesterase 2 (Os)(PubMedID : 27208977)@OsPOP2 - Putative Prolyl Oligopeptidase homologue, expressed -
15 Sobic.003G074600 Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
16 Sobic.001G175900 cytochrome P450, putative, expressed -
17 Sobic.004G183100 pentatricopeptide repeat domain containing protein, putative, expressed -
18 Sobic.001G527000 PsbP-like protein 1 (At)(PubMedID : 27208977)@Photosystem I subunit P-like protein(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
19 Sobic.007G090400 expressed protein -
20 Sobic.003G395900 transmembrane amino acid transporter protein, putative, expressed -


Gene co-expression network
sample Sobic004G235851 Sobic004G235851 Sobic001G255200 Sobic001G255200 Sobic004G235851--Sobic001G255200 Sobic004G046850 Sobic004G046850 Sobic004G235851--Sobic004G046850 Sobic007G004600 Sobic007G004600 Sobic004G235851--Sobic007G004600 Sobic001G350200 Sobic001G350200 Sobic004G235851--Sobic001G350200 Sobic001G255200--Sobic004G235851 Sobic003G074600 Sobic003G074600 Sobic001G255200--Sobic003G074600 Sobic006G086800 Sobic006G086800 Sobic001G255200--Sobic006G086800 Sobic008G130800 Sobic008G130800 Sobic001G255200--Sobic008G130800 Sobic004G162500 Sobic004G162500 Sobic001G255200--Sobic004G162500 Sobic001G285500 Sobic001G285500 Sobic001G255200--Sobic001G285500 Sobic001G323801 Sobic001G323801 Sobic001G255200--Sobic001G323801 Sobic001G255200--Sobic001G350200 Sobic001G068400 Sobic001G068400 Sobic004G046850--Sobic001G068400 Sobic004G026300 Sobic004G026300 Sobic004G046850--Sobic004G026300 Sobic001G189100 Sobic001G189100 Sobic004G046850--Sobic001G189100 Sobic003G131000 Sobic003G131000 Sobic004G046850--Sobic003G131000 Sobic003G237600 Sobic003G237600 Sobic004G046850--Sobic003G237600 Sobic003G069100 Sobic003G069100 Sobic004G046850--Sobic003G069100 Sobic001G355600 Sobic001G355600 Sobic004G046850--Sobic001G355600 Sobic009G222200 Sobic009G222200 Sobic004G046850--Sobic009G222200 Sobic009G183700 Sobic009G183700 Sobic007G004600--Sobic009G183700 Sobic010G277600 Sobic010G277600 Sobic007G004600--Sobic010G277600 Sobic001G527000 Sobic001G527000 Sobic007G004600--Sobic001G527000 Sobic009G091850 Sobic009G091850 Sobic007G004600--Sobic009G091850 Sobic009G030900 Sobic009G030900 Sobic007G004600--Sobic009G030900 Sobic004G311100 Sobic004G311100 Sobic007G004600--Sobic004G311100 Sobic004G251500 Sobic004G251500 Sobic007G004600--Sobic004G251500 Sobic003G433900 Sobic003G433900 Sobic007G004600--Sobic003G433900 Sobic003G387800 Sobic003G387800 Sobic007G004600--Sobic003G387800 Sobic001G350200--Sobic001G350200 Sobic008G088400 Sobic008G088400 Sobic001G350200--Sobic008G088400
Octagon: transcription factors


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