Gene annotation
Transcriptome id Sobic.004G264900.1
Synonym EMB2196, HISN6A, Sb04g030300, HPA1, ATHPA1
Functional annotation aminotransferase, classes I and II, domain containing protein, expressed
UniProt C5Y092 , C6JSQ8
Pfam PF00155
Panther DB PTHR11751 PTHR11751:SF3
NCBI CDD KOG0633; Histidinol phosphate aminotransferase
KEGG Orthology K00817; histidinol-phosphate aminotransferase
Gene Ontology GO:0009058; biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G10330 : histidinol phosphate aminotransferase 1
RAP-DB (Rice) LOC_Os02g47940.1 : aminotransferase, classes I and II, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021756
Brachypodium KQK00968
Barley HORVU6Hr1G069390.5 , HORVU6Hr1G069390.4 , HORVU6Hr1G069390.7 , HORVU6Hr1G069390.6 , HORVU6Hr1G069390.1 , HORVU6Hr1G069390.3 , HORVU6Hr1G069390.2
Wheat TraesCS6A02G275000 , TraesCS6B02G302500 , TraesCS6D02G255300
Populus -


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cDNA sequences
Sobic.004G264900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G099400 - -
2 Sobic.009G115800 REX1 DNA Repair family protein, expressed K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
3 Sobic.006G159500 serpin domain containing protein, putative, expressed K13963: serpin B
4 Sobic.003G261766 - -
5 Sobic.004G262550 - -
6 Sobic.005G041150 - -
7 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
8 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
9 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
10 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
11 Sobic.002G160500 - K07466: RFA1, RPA1, replication factor A1
12 Sobic.002G319900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
13 Sobic.003G267150 - -
14 Sobic.005G116800 - -
15 Sobic.009G091940 - -
16 Sobic.008G108100 - -
17 Sobic.003G067900 - -
18 Sobic.003G389150 - -
19 Sobic.004G313000 leucine rich repeat containing protein, expressed -
20 Sobic.006G135550 - -


Gene co-expression network
sample Sobic004G264900 Sobic004G264900 Sobic006G099400 Sobic006G099400 Sobic004G264900--Sobic006G099400 Sobic009G115800 Sobic009G115800 Sobic004G264900--Sobic009G115800 Sobic006G159500 Sobic006G159500 Sobic004G264900--Sobic006G159500 Sobic003G261766 Sobic003G261766 Sobic004G264900--Sobic003G261766 Sobic004G262550 Sobic004G262550 Sobic004G264900--Sobic004G262550 Sobic005G041150 Sobic005G041150 Sobic004G264900--Sobic005G041150 Sobic002G160500 Sobic002G160500 Sobic004G264900--Sobic002G160500 Sobic006G099400--Sobic009G115800 Sobic006G099400--Sobic005G041150 Sobic006G099400--Sobic003G261766 Sobic006G099400--Sobic006G159500 Sobic006G099400--Sobic004G264900 Sobic005G116800 Sobic005G116800 Sobic006G099400--Sobic005G116800 Sobic006G135550 Sobic006G135550 Sobic006G099400--Sobic006G135550 Sobic008G108100 Sobic008G108100 Sobic006G099400--Sobic008G108100 Sobic003G267150 Sobic003G267150 Sobic006G099400--Sobic003G267150 Sobic009G115800--Sobic003G261766 Sobic009G115800--Sobic006G159500 Sobic005G216833 Sobic005G216833 Sobic009G115800--Sobic005G216833 Sobic009G115800--Sobic008G108100 Sobic009G115800--Sobic005G041150 Sobic004G313000 Sobic004G313000 Sobic009G115800--Sobic004G313000 Sobic009G115800--Sobic003G267150 Sobic002G319900 Sobic002G319900 Sobic009G115800--Sobic002G319900 Sobic009G115800--Sobic002G160500 Sobic006G159500--Sobic009G115800 Sobic006G159500--Sobic003G261766 Sobic006G159500--Sobic004G313000 Sobic006G159500--Sobic003G267150 Sobic006G159500--Sobic005G216833 Sobic006G159500--Sobic002G319900 Sobic006G159500--Sobic002G160500 Sobic003G261766--Sobic009G115800 Sobic003G261766--Sobic006G159500 Sobic003G261766--Sobic005G216833 Sobic003G261766--Sobic005G041150 Sobic003G261766--Sobic008G108100 Sobic003G261766--Sobic006G135550 Sobic003G261766--Sobic004G313000 Sobic003G261766--Sobic006G099400 Sobic003G261766--Sobic003G267150 Sobic004G262550--Sobic002G160500 Sobic004G262550--Sobic003G267150 Sobic009G091940 Sobic009G091940 Sobic004G262550--Sobic009G091940 Sobic003G389150 Sobic003G389150 Sobic004G262550--Sobic003G389150 Sobic004G262550--Sobic004G313000 Sobic005G041150--Sobic009G115800 Sobic005G041150--Sobic003G261766 Sobic009G134700 Sobic009G134700 Sobic005G041150--Sobic009G134700 Sobic005G041150--Sobic006G099400 Sobic005G041150--Sobic006G159500 Sobic005G041150--Sobic005G116800 Sobic006G083050 Sobic006G083050 Sobic005G041150--Sobic006G083050 Sobic005G041150--Sobic008G108100 Sobic005G041150--Sobic006G135550 Sobic002G160500--Sobic002G160500 Sobic002G160500--Sobic003G267150 Sobic002G160500--Sobic004G262550 Sobic002G160500--Sobic009G091940 Sobic002G160500--Sobic003G389150 Sobic002G160500--Sobic004G313000
Octagon: transcription factors


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