Gene annotation
Transcriptome id Sobic.004G270100.2,Sobic.004G270100.1,Sobic.004G270100.3,Sobic.004G270100.4
Synonym Sb04g030790, BRX, NLM9
Functional annotation Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed
UniProt A0A1Z5RPT8 , A0A1Z5RPC9 , C5Y0D7
Pfam PF08381 PF13713 PF08381
Panther DB PTHR22870
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35600 : BREVIS RADIX-like 1
RAP-DB (Rice) LOC_Os02g47230.1 : Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed
MaizeGDB (Corn) Zm00025a021675 , Zm00025a009082 , Zm00025a056938 , Zm00025a009943
Brachypodium KQJ84394 , KQK12042 , KQK12043 , KQK00898 , KQK00899 , PNT69275 , PNT69276 , PNT69277
Barley HORVU0Hr1G016680.3 , HORVU0Hr1G016680.2 , HORVU0Hr1G016680.7 , HORVU0Hr1G016680.5 , HORVU0Hr1G016680.4 , HORVU0Hr1G016680.9 , HORVU0Hr1G016680.1 , HORVU0Hr1G016680.6 , HORVU6Hr1G068280.1 , HORVU6Hr1G068280.2 , HORVU6Hr1G068280.3 , HORVU5Hr1G123400.7 , HORVU5Hr1G123400.6 , HORVU5Hr1G123400.4 , HORVU5Hr1G123400.2 , HORVU6Hr1G068350.3 , HORVU6Hr1G068350.1 , HORVU6Hr1G068350.4 , HORVU6Hr1G068350.5 , HORVU6Hr1G068350.2 , HORVU2Hr1G101750.8 , HORVU2Hr1G101750.9 , HORVU2Hr1G101750.1 , HORVU2Hr1G101750.2 , HORVU2Hr1G101750.3 , HORVU2Hr1G101750.4 , HORVU2Hr1G101750.5 , HORVU2Hr1G101750.6 , HORVU2Hr1G101750.7 , HORVU0Hr1G016680.12 , HORVU0Hr1G016680.14 , HORVU5Hr1G123400.8 , HORVU2Hr1G101750.10 , HORVU2Hr1G101750.11 , HORVU0Hr1G016680.13 , HORVU0Hr1G016680.11 , HORVU0Hr1G016680.10 , HORVU0Hr1G016680.16 , HORVU0Hr1G016680.8 , HORVU0Hr1G016680.15
Wheat TraesCS2A02G438800 , TraesCS6B02G296800 , TraesCS5D02G555400 , TraesCS5B02G537300 , TraesCS2D02G435400 , TraesCS6A02G269500 , TraesCS6A02G269500 , TraesCS6D02G245400 , TraesCS6D02G245400 , TraesCS2B02G458600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G136500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.007G085400 NBS-LRR disease resistance protein, putative, expressed -
3 Sobic.005G154600 - -
4 Sobic.003G105200 ethylene-responsive protein related, putative, expressed -
5 Sobic.002G337400 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
6 Sobic.004G310350 - -
7 Sobic.006G261650 - -
8 Sobic.004G270900 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.008G093300 - -
10 Sobic.003G251000 S-locus-like receptor protein kinase, putative, expressed -
11 Sobic.010G247750 - -
12 Sobic.005G176300 Leucine Rich Repeat family protein, expressed -
13 Sobic.003G260500 - -
14 Sobic.006G053550 - -
15 Sobic.010G132400 Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
16 Sobic.007G127200 ECT protein, putative, expressed K07877: Ras-related protein Rab-2A
17 Sobic.004G276600 expressed protein -
18 Sobic.006G035350 - K02986: RP-S4, small subunit ribosomal protein S4
19 Sobic.001G224500 - -
20 Sobic.001G423200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic004G270100 Sobic004G270100 Sobic007G136500 Sobic007G136500 Sobic004G270100--Sobic007G136500 Sobic007G085400 Sobic007G085400 Sobic004G270100--Sobic007G085400 Sobic005G154600 Sobic005G154600 Sobic004G270100--Sobic005G154600 Sobic003G105200 Sobic003G105200 Sobic004G270100--Sobic003G105200 Sobic002G337400 Sobic002G337400 Sobic004G270100--Sobic002G337400 Sobic004G310350 Sobic004G310350 Sobic004G270100--Sobic004G310350 Sobic006G261650 Sobic006G261650 Sobic004G270100--Sobic006G261650 Sobic004G270900 Sobic004G270900 Sobic004G270100--Sobic004G270900 Sobic008G093300 Sobic008G093300 Sobic004G270100--Sobic008G093300 Sobic006G038050 Sobic006G038050 Sobic007G136500--Sobic006G038050 Sobic007G136500--Sobic004G270900 Sobic007G136500--Sobic005G154600 Sobic007G190600 Sobic007G190600 Sobic007G136500--Sobic007G190600 Sobic007G136500--Sobic006G261650 Sobic006G037800 Sobic006G037800 Sobic007G136500--Sobic006G037800 Sobic007G134700 Sobic007G134700 Sobic007G136500--Sobic007G134700 Sobic003G251000 Sobic003G251000 Sobic007G136500--Sobic003G251000 Sobic002G154450 Sobic002G154450 Sobic007G136500--Sobic002G154450 Sobic001G093400 Sobic001G093400 Sobic007G085400--Sobic001G093400 Sobic001G420150 Sobic001G420150 Sobic007G085400--Sobic001G420150 Sobic004G134400 Sobic004G134400 Sobic007G085400--Sobic004G134400 Sobic004G276600 Sobic004G276600 Sobic007G085400--Sobic004G276600 Sobic007G085400--Sobic008G093300 Sobic003G169700 Sobic003G169700 Sobic007G085400--Sobic003G169700 Sobic004G133201 Sobic004G133201 Sobic007G085400--Sobic004G133201 Sobic004G274300 Sobic004G274300 Sobic007G085400--Sobic004G274300 Sobic007G085400--Sobic002G337400 Sobic005G154600--Sobic006G261650 Sobic005G154600--Sobic004G276600 Sobic005G154600--Sobic002G154450 Sobic010G247750 Sobic010G247750 Sobic005G154600--Sobic010G247750 Sobic005G154600--Sobic004G310350 Sobic006G035350 Sobic006G035350 Sobic005G154600--Sobic006G035350 Sobic005G154600--Sobic008G093300 Sobic010G132400 Sobic010G132400 Sobic005G154600--Sobic010G132400 Sobic007G127200 Sobic007G127200 Sobic005G154600--Sobic007G127200 Sobic006G200650 Sobic006G200650 Sobic003G105200--Sobic006G200650 Sobic009G188200 Sobic009G188200 Sobic003G105200--Sobic009G188200 Sobic002G142400 Sobic002G142400 Sobic003G105200--Sobic002G142400 Sobic003G436100 Sobic003G436100 Sobic003G105200--Sobic003G436100 Sobic009G097500 Sobic009G097500 Sobic003G105200--Sobic009G097500 Sobic001G224500 Sobic001G224500 Sobic003G105200--Sobic001G224500 Sobic006G239200 Sobic006G239200 Sobic003G105200--Sobic006G239200 Sobic002G334700 Sobic002G334700 Sobic003G105200--Sobic002G334700 Sobic002G305900 Sobic002G305900 Sobic003G105200--Sobic002G305900 Sobic002G337400--Sobic004G276600 Sobic002G337400--Sobic001G420150 Sobic002G337400--Sobic006G261650 Sobic002G337400--Sobic007G085400 Sobic002G337400--Sobic003G169700 Sobic002G337400--Sobic005G154600 Sobic001G423200 Sobic001G423200 Sobic002G337400--Sobic001G423200 Sobic002G337400--Sobic001G093400 Sobic007G116300 Sobic007G116300 Sobic002G337400--Sobic007G116300 Sobic006G053550 Sobic006G053550 Sobic004G310350--Sobic006G053550 Sobic005G019250 Sobic005G019250 Sobic004G310350--Sobic005G019250 Sobic002G214000 Sobic002G214000 Sobic004G310350--Sobic002G214000 Sobic004G310350--Sobic001G224500 SobicK031900 SobicK031900 Sobic004G310350--SobicK031900 Sobic008G129500 Sobic008G129500 Sobic004G310350--Sobic008G129500 Sobic004G310350--Sobic005G154600 Sobic009G215100 Sobic009G215100 Sobic004G310350--Sobic009G215100 Sobic003G268100 Sobic003G268100 Sobic004G310350--Sobic003G268100 Sobic006G261650--Sobic005G154600 Sobic006G261650--Sobic004G276600 Sobic006G261650--Sobic002G337400 Sobic006G261650--Sobic003G169700 Sobic006G261650--Sobic002G154450 Sobic006G261650--Sobic007G190600 Sobic006G261650--Sobic001G420150 Sobic006G261650--Sobic007G085400 Sobic006G261650--Sobic007G127200 Sobic004G270900--Sobic006G261650 Sobic004G270900--Sobic007G136500 Sobic004G270900--Sobic005G154600 Sobic004G270900--Sobic004G276600 Sobic006G212200 Sobic006G212200 Sobic004G270900--Sobic006G212200 Sobic004G270900--Sobic002G154450 Sobic004G270900--Sobic007G190600 Sobic004G270900--Sobic002G337400 Sobic010G149000 Sobic010G149000 Sobic004G270900--Sobic010G149000 Sobic008G093300--Sobic006G035350 Sobic008G093300--Sobic010G247750 Sobic008G093300--Sobic007G127200 Sobic004G127733 Sobic004G127733 Sobic008G093300--Sobic004G127733 Sobic003G260500 Sobic003G260500 Sobic008G093300--Sobic003G260500 Sobic008G100201 Sobic008G100201 Sobic008G093300--Sobic008G100201 Sobic007G103200 Sobic007G103200 Sobic008G093300--Sobic007G103200 Sobic010G143700 Sobic010G143700 Sobic008G093300--Sobic010G143700 Sobic008G093300--Sobic004G134400
Octagon: transcription factors


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