Gene annotation
Transcriptome id Sobic.004G280600.1
Synonym
Functional annotation -
UniProt C5Y0X3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G036500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Myb-like DNA-binding domain containing protein, putative, expressed -
2 Sobic.008G179100 - -
3 Sobic.003G245201 - -
4 Sobic.003G076800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AP2/B3 transcription factor(PubMedID : 27016024)@cytochrome P450, putative, expressed -
5 Sobic.001G370100 R3H domain containing protein, expressed -
6 Sobic.003G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@O-methyltransferase, putative, expressed -
7 Sobic.002G063201 - -
8 Sobic.001G177500 - -
9 Sobic.001G444100 peptide transporter, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
10 Sobic.004G327100 atATG18b, putative, expressed K17908: WIPI1_2, autophagy-related protein 18
11 Sobic.002G013500 pentatricopeptide, putative, expressed -
12 Sobic.005G041700 - -
13 Sobic.010G140800 - -
14 Sobic.001G152240 - -
15 Sobic.005G204400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
16 Sobic.006G076700 - -
17 Sobic.010G273200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
18 Sobic.002G103400 - -
19 Sobic.005G186600 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed -
20 Sobic.004G184900 pentatricopeptide repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G280600 Sobic004G280600 Sobic004G036500 Sobic004G036500 Sobic004G280600--Sobic004G036500 Sobic008G179100 Sobic008G179100 Sobic004G280600--Sobic008G179100 Sobic003G245201 Sobic003G245201 Sobic004G280600--Sobic003G245201 Sobic003G076800 Sobic003G076800 Sobic004G280600--Sobic003G076800 Sobic001G370100 Sobic001G370100 Sobic004G280600--Sobic001G370100 Sobic003G298500 Sobic003G298500 Sobic004G280600--Sobic003G298500 Sobic002G063201 Sobic002G063201 Sobic004G280600--Sobic002G063201 Sobic001G177500 Sobic001G177500 Sobic004G280600--Sobic001G177500 Sobic001G444100 Sobic001G444100 Sobic004G280600--Sobic001G444100 Sobic004G036500--Sobic002G063201 Sobic004G327100 Sobic004G327100 Sobic004G036500--Sobic004G327100 Sobic004G036500--Sobic003G245201 Sobic004G036500--Sobic001G370100 Sobic010G228200 Sobic010G228200 Sobic004G036500--Sobic010G228200 Sobic005G207550 Sobic005G207550 Sobic004G036500--Sobic005G207550 Sobic005G207600 Sobic005G207600 Sobic004G036500--Sobic005G207600 Sobic010G146350 Sobic010G146350 Sobic004G036500--Sobic010G146350 Sobic001G138500 Sobic001G138500 Sobic004G036500--Sobic001G138500 Sobic001G121000 Sobic001G121000 Sobic008G179100--Sobic001G121000 Sobic010G228300 Sobic010G228300 Sobic008G179100--Sobic010G228300 Sobic007G215300 Sobic007G215300 Sobic008G179100--Sobic007G215300 Sobic001G213150 Sobic001G213150 Sobic008G179100--Sobic001G213150 Sobic009G029800 Sobic009G029800 Sobic008G179100--Sobic009G029800 Sobic009G142700 Sobic009G142700 Sobic008G179100--Sobic009G142700 Sobic003G060900 Sobic003G060900 Sobic008G179100--Sobic003G060900 Sobic007G095850 Sobic007G095850 Sobic008G179100--Sobic007G095850 Sobic005G204400 Sobic005G204400 Sobic008G179100--Sobic005G204400 Sobic005G041700 Sobic005G041700 Sobic003G245201--Sobic005G041700 Sobic001G234700 Sobic001G234700 Sobic003G245201--Sobic001G234700 Sobic003G076800--Sobic003G298500 Sobic005G190700 Sobic005G190700 Sobic003G076800--Sobic005G190700 Sobic003G076800--Sobic004G036500 Sobic007G129900 Sobic007G129900 Sobic003G076800--Sobic007G129900 Sobic010G178050 Sobic010G178050 Sobic003G076800--Sobic010G178050 Sobic003G076800--Sobic003G245201 Sobic002G277900 Sobic002G277900 Sobic003G076800--Sobic002G277900 Sobic003G008100 Sobic003G008100 Sobic003G076800--Sobic003G008100 Sobic003G076800--Sobic002G063201 Sobic001G370100--Sobic001G177500 Sobic001G370100--Sobic004G327100 Sobic007G027400 Sobic007G027400 Sobic001G370100--Sobic007G027400 Sobic001G045300 Sobic001G045300 Sobic001G370100--Sobic001G045300 Sobic001G358101 Sobic001G358101 Sobic001G370100--Sobic001G358101 Sobic002G046500 Sobic002G046500 Sobic001G370100--Sobic002G046500 Sobic003G190701 Sobic003G190701 Sobic001G370100--Sobic003G190701 Sobic010G140800 Sobic010G140800 Sobic001G370100--Sobic010G140800 Sobic004G162800 Sobic004G162800 Sobic001G370100--Sobic004G162800 Sobic007G100900 Sobic007G100900 Sobic003G298500--Sobic007G100900 Sobic003G298500--Sobic004G327100 Sobic003G298500--Sobic002G063201 Sobic007G087500 Sobic007G087500 Sobic003G298500--Sobic007G087500 Sobic001G452300 Sobic001G452300 Sobic003G298500--Sobic001G452300 Sobic008G008601 Sobic008G008601 Sobic003G298500--Sobic008G008601 Sobic004G184900 Sobic004G184900 Sobic003G298500--Sobic004G184900 Sobic008G024000 Sobic008G024000 Sobic003G298500--Sobic008G024000 Sobic002G063500 Sobic002G063500 Sobic003G298500--Sobic002G063500 Sobic003G021401 Sobic003G021401 Sobic002G063201--Sobic003G021401 Sobic003G120050 Sobic003G120050 Sobic002G063201--Sobic003G120050 Sobic003G023100 Sobic003G023100 Sobic002G063201--Sobic003G023100 Sobic002G063201--Sobic010G228200 Sobic002G063201--Sobic010G146350 Sobic002G063201--Sobic005G207600 Sobic002G063201--Sobic001G452300 Sobic002G063201--Sobic004G327100 Sobic002G063201--Sobic008G008601 Sobic001G177500--Sobic001G370100 Sobic001G177500--Sobic010G140800 Sobic006G076700 Sobic006G076700 Sobic001G177500--Sobic006G076700 Sobic009G159800 Sobic009G159800 Sobic001G177500--Sobic009G159800 Sobic001G177500--Sobic001G234700 Sobic001G327400 Sobic001G327400 Sobic001G444100--Sobic001G327400 Sobic004G159600 Sobic004G159600 Sobic001G444100--Sobic004G159600 Sobic001G444100--Sobic004G036500 Sobic002G013500 Sobic002G013500 Sobic001G444100--Sobic002G013500 Sobic002G252600 Sobic002G252600 Sobic001G444100--Sobic002G252600 Sobic006G045200 Sobic006G045200 Sobic001G444100--Sobic006G045200 Sobic001G444100--Sobic001G370100 Sobic001G444100--Sobic003G298500 Sobic001G444100--Sobic001G177500
Octagon: transcription factors


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