Gene annotation
Transcriptome id Sobic.005G015700.3,Sobic.005G015700.4,Sobic.005G015700.2
Synonym Sb05g001340
Functional annotation "similar to Harpin-induced protein 1 containing protein, expressed" (PubMedID : 29862293)
harpin-induced protein 1 domain containing protein, expressed
UniProt C5Y3J4
Pfam PF03168
Panther DB PTHR31852 PTHR31852:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05975 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os11g02730.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013171
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G015700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G258801 - -
2 Sobic.010G166700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thaumatin, putative, expressed -
3 Sobic.009G001800 expressed protein -
4 Sobic.008G000100 monoglyceride lipase, putative, expressed -
5 Sobic.001G011300 expressed protein -
6 Sobic.001G463500 FAD-linked sulfhydryl oxidase ALR, putative, expressed K17783: ERV1, GFER, mitochondrial FAD-linked sulfhydryl oxidase
7 Sobic.004G296800 3-isopropylmalate dehydratase small subunit 2, putative, expressed K01704: leuD, 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
8 Sobic.004G006100 cytochrome P450, putative, expressed -
9 Sobic.008G105300 expressed protein -
10 Sobic.010G050900 harpin-induced protein, putative, expressed -
11 Sobic.006G155700 ABC transporter(PubMedID : 23463491)@white-brown complex homolog protein 11, putative, expressed -
12 Sobic.010G221600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
13 Sobic.004G016300 PPR repeat containing protein, expressed -
14 Sobic.004G327800 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
15 Sobic.001G543700 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
16 Sobic.010G253901 - -
17 Sobic.008G125100 Mur ligase family protein, putative, expressed -
18 Sobic.002G207900 WAX2, putative, expressed -
19 Sobic.007G206100 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.002G242600 expressed protein -


Gene co-expression network
sample Sobic005G015700 Sobic005G015700 Sobic001G258801 Sobic001G258801 Sobic005G015700--Sobic001G258801 Sobic010G166700 Sobic010G166700 Sobic005G015700--Sobic010G166700 Sobic009G001800 Sobic009G001800 Sobic005G015700--Sobic009G001800 Sobic008G000100 Sobic008G000100 Sobic005G015700--Sobic008G000100 Sobic001G011300 Sobic001G011300 Sobic005G015700--Sobic001G011300 Sobic001G463500 Sobic001G463500 Sobic005G015700--Sobic001G463500 Sobic004G296800 Sobic004G296800 Sobic005G015700--Sobic004G296800 Sobic004G006100 Sobic004G006100 Sobic005G015700--Sobic004G006100 Sobic008G105300 Sobic008G105300 Sobic005G015700--Sobic008G105300 Sobic008G125100 Sobic008G125100 Sobic001G258801--Sobic008G125100 Sobic008G084401 Sobic008G084401 Sobic001G258801--Sobic008G084401 Sobic002G072300 Sobic002G072300 Sobic001G258801--Sobic002G072300 Sobic008G030600 Sobic008G030600 Sobic001G258801--Sobic008G030600 Sobic001G258801--Sobic005G015700 Sobic009G231100 Sobic009G231100 Sobic001G258801--Sobic009G231100 Sobic001G063800 Sobic001G063800 Sobic001G258801--Sobic001G063800 Sobic009G160500 Sobic009G160500 Sobic001G258801--Sobic009G160500 Sobic001G543700 Sobic001G543700 Sobic001G258801--Sobic001G543700 Sobic002G110100 Sobic002G110100 Sobic010G166700--Sobic002G110100 Sobic008G109100 Sobic008G109100 Sobic010G166700--Sobic008G109100 Sobic010G050900 Sobic010G050900 Sobic010G166700--Sobic010G050900 Sobic004G201300 Sobic004G201300 Sobic010G166700--Sobic004G201300 Sobic002G226700 Sobic002G226700 Sobic010G166700--Sobic002G226700 Sobic010G123300 Sobic010G123300 Sobic010G166700--Sobic010G123300 Sobic001G021500 Sobic001G021500 Sobic010G166700--Sobic001G021500 Sobic009G136900 Sobic009G136900 Sobic010G166700--Sobic009G136900 Sobic007G154800 Sobic007G154800 Sobic010G166700--Sobic007G154800 Sobic009G001800--Sobic008G105300 Sobic004G296500 Sobic004G296500 Sobic009G001800--Sobic004G296500 Sobic003G118800 Sobic003G118800 Sobic009G001800--Sobic003G118800 Sobic004G143400 Sobic004G143400 Sobic009G001800--Sobic004G143400 Sobic003G069700 Sobic003G069700 Sobic009G001800--Sobic003G069700 Sobic001G495300 Sobic001G495300 Sobic009G001800--Sobic001G495300 Sobic007G210600 Sobic007G210600 Sobic009G001800--Sobic007G210600 Sobic006G155700 Sobic006G155700 Sobic009G001800--Sobic006G155700 Sobic006G060200 Sobic006G060200 Sobic009G001800--Sobic006G060200 Sobic004G203900 Sobic004G203900 Sobic008G000100--Sobic004G203900 Sobic003G149000 Sobic003G149000 Sobic008G000100--Sobic003G149000 Sobic005G141000 Sobic005G141000 Sobic008G000100--Sobic005G141000 Sobic004G249400 Sobic004G249400 Sobic008G000100--Sobic004G249400 Sobic008G143600 Sobic008G143600 Sobic008G000100--Sobic008G143600 Sobic005G218201 Sobic005G218201 Sobic008G000100--Sobic005G218201 Sobic004G257700 Sobic004G257700 Sobic008G000100--Sobic004G257700 Sobic009G070700 Sobic009G070700 Sobic008G000100--Sobic009G070700 Sobic002G207900 Sobic002G207900 Sobic008G000100--Sobic002G207900 Sobic001G306700 Sobic001G306700 Sobic001G011300--Sobic001G306700 Sobic003G265500 Sobic003G265500 Sobic001G011300--Sobic003G265500 Sobic004G070800 Sobic004G070800 Sobic001G011300--Sobic004G070800 Sobic010G091200 Sobic010G091200 Sobic001G011300--Sobic010G091200 Sobic001G011300--Sobic001G463500 Sobic003G420900 Sobic003G420900 Sobic001G011300--Sobic003G420900 Sobic001G008700 Sobic001G008700 Sobic001G011300--Sobic001G008700 Sobic004G068300 Sobic004G068300 Sobic001G011300--Sobic004G068300 Sobic004G015700 Sobic004G015700 Sobic001G011300--Sobic004G015700 Sobic001G463500--Sobic004G296800 Sobic008G135701 Sobic008G135701 Sobic001G463500--Sobic008G135701 Sobic002G330500 Sobic002G330500 Sobic001G463500--Sobic002G330500 Sobic001G463500--Sobic001G008700 Sobic001G463500--Sobic003G420900 Sobic001G463500--Sobic001G543700 Sobic001G463500--Sobic001G011300 Sobic002G253100 Sobic002G253100 Sobic001G463500--Sobic002G253100 Sobic002G333100 Sobic002G333100 Sobic001G463500--Sobic002G333100 Sobic001G376700 Sobic001G376700 Sobic004G296800--Sobic001G376700 Sobic004G296800--Sobic001G543700 Sobic004G044200 Sobic004G044200 Sobic004G296800--Sobic004G044200 Sobic004G296800--Sobic003G420900 Sobic004G296800--Sobic002G207900 Sobic007G026200 Sobic007G026200 Sobic004G296800--Sobic007G026200 Sobic008G123600 Sobic008G123600 Sobic004G296800--Sobic008G123600 Sobic001G541300 Sobic001G541300 Sobic004G296800--Sobic001G541300 Sobic004G296800--Sobic005G218201 Sobic004G253800 Sobic004G253800 Sobic004G006100--Sobic004G253800 Sobic003G120500 Sobic003G120500 Sobic004G006100--Sobic003G120500 Sobic004G170600 Sobic004G170600 Sobic004G006100--Sobic004G170600 Sobic002G242600 Sobic002G242600 Sobic004G006100--Sobic002G242600 Sobic003G157500 Sobic003G157500 Sobic004G006100--Sobic003G157500 Sobic005G020200 Sobic005G020200 Sobic004G006100--Sobic005G020200 Sobic009G196200 Sobic009G196200 Sobic004G006100--Sobic009G196200 Sobic001G453200 Sobic001G453200 Sobic004G006100--Sobic001G453200 Sobic005G200600 Sobic005G200600 Sobic004G006100--Sobic005G200600 Sobic008G105300--Sobic004G143400 Sobic008G110800 Sobic008G110800 Sobic008G105300--Sobic008G110800 Sobic008G105850 Sobic008G105850 Sobic008G105300--Sobic008G105850 Sobic008G105300--Sobic009G001800 Sobic009G029500 Sobic009G029500 Sobic008G105300--Sobic009G029500 Sobic006G067100 Sobic006G067100 Sobic008G105300--Sobic006G067100 Sobic001G261537 Sobic001G261537 Sobic008G105300--Sobic001G261537 Sobic008G117800 Sobic008G117800 Sobic008G105300--Sobic008G117800 Sobic001G201966 Sobic001G201966 Sobic008G105300--Sobic001G201966
Octagon: transcription factors


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