Gene annotation
Transcriptome id Sobic.005G170600.1
Synonym Sb05g023090
Functional annotation OsFBDUF55 - F-box and DUF domain containing protein, expressed
UniProt C5Y5F0
Pfam PF03478
Panther DB PTHR11102 PTHR11102:SF101
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G57790 : F-box family protein
RAP-DB (Rice) LOC_Os11g38140.1 : OsFBDUF58 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G051001 - -
2 Sobic.007G162200 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.010G195800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamoyl-CoA reductase family (At)(PubMedID : 27208977)@reductase, putative, expressed -
4 Sobic.001G266600 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.005G110538 - K08818: cell division cycle 2-like
6 Sobic.009G048600 - -
7 Sobic.008G087300 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
8 Sobic.007G175400 carrier, putative, expressed -
9 Sobic.002G332300 expressed protein -
10 Sobic.004G167000 POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
11 Sobic.008G008200 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
12 Sobic.005G006000 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
13 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
14 Sobic.006G005700 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
15 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.008G156100 ankyrin repeat domain-containing protein 44, putative, expressed -
17 Sobic.002G028201 - K10523: speckle-type POZ protein
18 Sobic.006G281132 - -
19 Sobic.007G068700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
20 Sobic.008G168866 - -


Gene co-expression network
sample Sobic005G170600 Sobic005G170600 Sobic009G051001 Sobic009G051001 Sobic005G170600--Sobic009G051001 Sobic007G162200 Sobic007G162200 Sobic005G170600--Sobic007G162200 Sobic010G195800 Sobic010G195800 Sobic005G170600--Sobic010G195800 Sobic001G266600 Sobic001G266600 Sobic005G170600--Sobic001G266600 Sobic005G110538 Sobic005G110538 Sobic005G170600--Sobic005G110538 Sobic009G048600 Sobic009G048600 Sobic005G170600--Sobic009G048600 Sobic008G087300 Sobic008G087300 Sobic005G170600--Sobic008G087300 Sobic007G175400 Sobic007G175400 Sobic005G170600--Sobic007G175400 Sobic002G332300 Sobic002G332300 Sobic005G170600--Sobic002G332300 Sobic009G051001--Sobic005G170600 Sobic008G168866 Sobic008G168866 Sobic009G051001--Sobic008G168866 Sobic009G051001--Sobic007G175400 Sobic001G278000 Sobic001G278000 Sobic009G051001--Sobic001G278000 Sobic009G051001--Sobic005G110538 Sobic005G099400 Sobic005G099400 Sobic009G051001--Sobic005G099400 Sobic009G051001--Sobic008G087300 Sobic010G152900 Sobic010G152900 Sobic009G051001--Sobic010G152900 Sobic004G167000 Sobic004G167000 Sobic009G051001--Sobic004G167000 Sobic007G162200--Sobic001G266600 Sobic007G162200--Sobic010G195800 Sobic007G162200--Sobic009G048600 Sobic007G162200--Sobic008G087300 Sobic005G006000 Sobic005G006000 Sobic007G162200--Sobic005G006000 Sobic006G005700 Sobic006G005700 Sobic007G162200--Sobic006G005700 Sobic008G008200 Sobic008G008200 Sobic007G162200--Sobic008G008200 Sobic007G162200--Sobic004G167000 Sobic009G239800 Sobic009G239800 Sobic007G162200--Sobic009G239800 Sobic010G195800--Sobic007G162200 Sobic010G195800--Sobic001G266600 Sobic010G195800--Sobic009G048600 Sobic010G195800--Sobic008G008200 Sobic010G195800--Sobic008G087300 Sobic007G068700 Sobic007G068700 Sobic010G195800--Sobic007G068700 Sobic010G195800--Sobic004G167000 Sobic010G195800--Sobic009G239800 Sobic010G195800--Sobic005G110538 Sobic001G266600--Sobic009G048600 Sobic001G266600--Sobic007G162200 Sobic001G266600--Sobic005G006000 Sobic001G266600--Sobic010G195800 Sobic001G266600--Sobic006G005700 Sobic008G156100 Sobic008G156100 Sobic001G266600--Sobic008G156100 Sobic002G028201 Sobic002G028201 Sobic001G266600--Sobic002G028201 Sobic006G281132 Sobic006G281132 Sobic001G266600--Sobic006G281132 Sobic009G146000 Sobic009G146000 Sobic001G266600--Sobic009G146000 Sobic005G110538--Sobic008G087300 Sobic005G110538--Sobic008G008200 Sobic005G110538--Sobic004G167000 Sobic001G266900 Sobic001G266900 Sobic005G110538--Sobic001G266900 Sobic010G180000 Sobic010G180000 Sobic005G110538--Sobic010G180000 Sobic008G138300 Sobic008G138300 Sobic005G110538--Sobic008G138300 Sobic005G110538--Sobic007G068700 Sobic005G110538--Sobic009G239800 Sobic003G162500 Sobic003G162500 Sobic005G110538--Sobic003G162500 Sobic009G048600--Sobic001G266600 Sobic009G048600--Sobic005G006000 Sobic009G048600--Sobic008G156100 Sobic009G048600--Sobic002G028201 Sobic009G048600--Sobic006G281132 Sobic009G048600--Sobic006G005700 Sobic009G048600--Sobic007G162200 Sobic009G048600--Sobic009G146000 Sobic009G048600--Sobic010G195800 Sobic008G087300--Sobic004G167000 Sobic008G087300--Sobic001G266900 Sobic008G087300--Sobic008G008200 Sobic008G087300--Sobic010G180000 Sobic008G087300--Sobic008G138300 Sobic010G159500 Sobic010G159500 Sobic008G087300--Sobic010G159500 Sobic008G087300--Sobic009G239800 Sobic003G239400 Sobic003G239400 Sobic008G087300--Sobic003G239400 Sobic008G126000 Sobic008G126000 Sobic008G087300--Sobic008G126000 Sobic007G175400--Sobic010G152900 Sobic003G040400 Sobic003G040400 Sobic007G175400--Sobic003G040400 Sobic009G116300 Sobic009G116300 Sobic007G175400--Sobic009G116300 Sobic001G332050 Sobic001G332050 Sobic007G175400--Sobic001G332050 Sobic002G332300--Sobic008G087300 Sobic002G332300--Sobic004G167000 Sobic001G238600 Sobic001G238600 Sobic002G332300--Sobic001G238600 Sobic002G332300--Sobic010G180000 Sobic002G332300--Sobic007G175400 Sobic002G332300--Sobic008G008200 Sobic002G332300--Sobic008G126000 Sobic002G332300--Sobic001G266900 Sobic002G332300--Sobic009G239800
Octagon: transcription factors


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