Gene annotation
Transcriptome id Sobic.009G051001.1
Synonym -
Functional annotation -
UniProt A0A1Z5R103
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G170600 OsFBDUF55 - F-box and DUF domain containing protein, expressed -
2 Sobic.008G168866 - -
3 Sobic.007G175400 carrier, putative, expressed -
4 Sobic.001G278000 - -
5 Sobic.005G110538 - K08818: cell division cycle 2-like
6 Sobic.005G099400 ubiquitin family protein, putative, expressed -
7 Sobic.008G087300 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
8 Sobic.010G152900 beta-D-xylosidase, putative, expressed -
9 Sobic.004G167000 POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
10 Sobic.008G008200 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
11 Sobic.002G332300 expressed protein -
12 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.010G195800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamoyl-CoA reductase family (At)(PubMedID : 27208977)@reductase, putative, expressed -
14 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
15 Sobic.007G162200 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.010G180000 - -
17 Sobic.010G232000 RIC10, putative, expressed -
18 Sobic.002G129500 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
19 Sobic.008G138300 expressed protein -
20 Sobic.007G068700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase


Gene co-expression network
sample Sobic009G051001 Sobic009G051001 Sobic005G170600 Sobic005G170600 Sobic009G051001--Sobic005G170600 Sobic008G168866 Sobic008G168866 Sobic009G051001--Sobic008G168866 Sobic007G175400 Sobic007G175400 Sobic009G051001--Sobic007G175400 Sobic001G278000 Sobic001G278000 Sobic009G051001--Sobic001G278000 Sobic005G110538 Sobic005G110538 Sobic009G051001--Sobic005G110538 Sobic005G099400 Sobic005G099400 Sobic009G051001--Sobic005G099400 Sobic008G087300 Sobic008G087300 Sobic009G051001--Sobic008G087300 Sobic010G152900 Sobic010G152900 Sobic009G051001--Sobic010G152900 Sobic004G167000 Sobic004G167000 Sobic009G051001--Sobic004G167000 Sobic005G170600--Sobic009G051001 Sobic007G162200 Sobic007G162200 Sobic005G170600--Sobic007G162200 Sobic010G195800 Sobic010G195800 Sobic005G170600--Sobic010G195800 Sobic001G266600 Sobic001G266600 Sobic005G170600--Sobic001G266600 Sobic005G170600--Sobic005G110538 Sobic009G048600 Sobic009G048600 Sobic005G170600--Sobic009G048600 Sobic005G170600--Sobic008G087300 Sobic005G170600--Sobic007G175400 Sobic002G332300 Sobic002G332300 Sobic005G170600--Sobic002G332300 Sobic008G168866--Sobic009G051001 Sobic008G168866--Sobic001G278000 Sobic008G168866--Sobic005G170600 Sobic008G168866--Sobic005G099400 Sobic001G253000 Sobic001G253000 Sobic008G168866--Sobic001G253000 Sobic008G168866--Sobic007G175400 Sobic003G220000 Sobic003G220000 Sobic008G168866--Sobic003G220000 Sobic005G085901 Sobic005G085901 Sobic008G168866--Sobic005G085901 Sobic001G238600 Sobic001G238600 Sobic008G168866--Sobic001G238600 Sobic007G175400--Sobic010G152900 Sobic003G040400 Sobic003G040400 Sobic007G175400--Sobic003G040400 Sobic009G116300 Sobic009G116300 Sobic007G175400--Sobic009G116300 Sobic001G332050 Sobic001G332050 Sobic007G175400--Sobic001G332050 Sobic001G278000--Sobic008G168866 Sobic001G278000--Sobic007G175400 Sobic001G278000--Sobic009G051001 Sobic003G231500 Sobic003G231500 Sobic001G278000--Sobic003G231500 Sobic001G278000--Sobic005G085901 Sobic001G278000--Sobic003G220000 Sobic001G278000--Sobic001G238600 Sobic001G278000--Sobic005G170600 Sobic001G422300 Sobic001G422300 Sobic001G278000--Sobic001G422300 Sobic005G110538--Sobic008G087300 Sobic008G008200 Sobic008G008200 Sobic005G110538--Sobic008G008200 Sobic005G110538--Sobic004G167000 Sobic001G266900 Sobic001G266900 Sobic005G110538--Sobic001G266900 Sobic010G180000 Sobic010G180000 Sobic005G110538--Sobic010G180000 Sobic008G138300 Sobic008G138300 Sobic005G110538--Sobic008G138300 Sobic007G068700 Sobic007G068700 Sobic005G110538--Sobic007G068700 Sobic009G239800 Sobic009G239800 Sobic005G110538--Sobic009G239800 Sobic003G162500 Sobic003G162500 Sobic005G110538--Sobic003G162500 Sobic005G006701 Sobic005G006701 Sobic005G099400--Sobic005G006701 Sobic004G089400 Sobic004G089400 Sobic005G099400--Sobic004G089400 Sobic004G022366 Sobic004G022366 Sobic005G099400--Sobic004G022366 Sobic010G043300 Sobic010G043300 Sobic005G099400--Sobic010G043300 Sobic004G149200 Sobic004G149200 Sobic005G099400--Sobic004G149200 Sobic002G260100 Sobic002G260100 Sobic005G099400--Sobic002G260100 Sobic010G077900 Sobic010G077900 Sobic005G099400--Sobic010G077900 Sobic001G215201 Sobic001G215201 Sobic005G099400--Sobic001G215201 Sobic003G164300 Sobic003G164300 Sobic005G099400--Sobic003G164300 Sobic008G087300--Sobic004G167000 Sobic008G087300--Sobic001G266900 Sobic008G087300--Sobic008G008200 Sobic008G087300--Sobic010G180000 Sobic008G087300--Sobic008G138300 Sobic010G159500 Sobic010G159500 Sobic008G087300--Sobic010G159500 Sobic008G087300--Sobic009G239800 Sobic003G239400 Sobic003G239400 Sobic008G087300--Sobic003G239400 Sobic008G126000 Sobic008G126000 Sobic008G087300--Sobic008G126000 Sobic010G152900--Sobic003G239400 Sobic003G206300 Sobic003G206300 Sobic010G152900--Sobic003G206300 Sobic010G200000 Sobic010G200000 Sobic010G152900--Sobic010G200000 Sobic010G152900--Sobic009G116300 Sobic010G152900--Sobic001G332050 Sobic004G167000--Sobic008G087300 Sobic004G167000--Sobic001G266900 Sobic004G167000--Sobic008G008200 Sobic004G167000--Sobic010G180000 Sobic004G167000--Sobic008G138300 Sobic004G167000--Sobic010G159500 Sobic007G064600 Sobic007G064600 Sobic004G167000--Sobic007G064600 Sobic004G167000--Sobic003G239400 Sobic004G167000--Sobic003G040400
Octagon: transcription factors


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