Gene annotation
Transcriptome id Sobic.005G206300.2,Sobic.005G206300.3,Sobic.005G206300.4
Synonym Sb05g026090
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ATA15 protein, putative, expressed
UniProt A0A1Z5RK54 , A0A1B6PTR6 , A0A1Z5RJK4
Pfam -
Panther DB PTHR36725
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G66330 : senescence-associated family protein
RAP-DB (Rice) LOC_Os05g05600.6,LOC_Os05g05600.1,LOC_Os05g05600.3 : ATA15 protein, putative, expressed
MaizeGDB (Corn) Zm00025a029185
Brachypodium KQJ94478
Barley HORVU6Hr1G050440.11 , HORVU6Hr1G050440.10 , HORVU6Hr1G050440.13 , HORVU6Hr1G050440.12 , HORVU6Hr1G050440.15 , HORVU6Hr1G050440.14 , HORVU6Hr1G050440.5 , HORVU6Hr1G050440.4 , HORVU6Hr1G050440.7 , HORVU6Hr1G050440.6 , HORVU6Hr1G050440.1 , HORVU6Hr1G050440.3 , HORVU6Hr1G050440.2 , HORVU6Hr1G050440.9 , HORVU6Hr1G050440.8
Wheat TraesCS6D02G176700 , TraesCS6A02G188100 , TraesCS6A02G188100 , TraesCS6A02G188100 , TraesCS6A02G188100 , TraesCS6B02G234900
Populus -


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cDNA sequences
Sobic.005G206300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G231500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AAA-type ATPase family protein, putative, expressed -
2 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
4 Sobic.003G391200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
5 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
6 Sobic.009G015100 ACT domain containing protein, expressed -
7 Sobic.004G154200 expressed protein -
8 Sobic.010G249700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
9 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
10 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
11 Sobic.010G085100 geminivirus Rep-interacting motor protein, putative, expressed -
12 Sobic.010G255300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
13 Sobic.005G118400 expressed protein -
14 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
15 Sobic.010G002700 expressed protein -
16 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
17 Sobic.002G306800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
18 Sobic.007G047400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@MYB family transcription factor, putative, expressed K12133: MYB-related transcription factor LHY
19 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
20 Sobic.004G032400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-aspartate oxidase 1, putative, expressed K00278: L-aspartate oxidase


Gene co-expression network
sample Sobic005G206300 Sobic005G206300 Sobic005G231500 Sobic005G231500 Sobic005G206300--Sobic005G231500 Sobic004G356400 Sobic004G356400 Sobic005G206300--Sobic004G356400 Sobic001G017300 Sobic001G017300 Sobic005G206300--Sobic001G017300 Sobic003G391200 Sobic003G391200 Sobic005G206300--Sobic003G391200 Sobic005G101200 Sobic005G101200 Sobic005G206300--Sobic005G101200 Sobic009G015100 Sobic009G015100 Sobic005G206300--Sobic009G015100 Sobic004G154200 Sobic004G154200 Sobic005G206300--Sobic004G154200 Sobic010G249700 Sobic010G249700 Sobic005G206300--Sobic010G249700 Sobic003G313300 Sobic003G313300 Sobic005G206300--Sobic003G313300 Sobic003G367500 Sobic003G367500 Sobic005G231500--Sobic003G367500 Sobic010G251700 Sobic010G251700 Sobic005G231500--Sobic010G251700 Sobic005G231500--Sobic005G206300 Sobic005G231500--Sobic004G154200 Sobic007G105500 Sobic007G105500 Sobic005G231500--Sobic007G105500 Sobic001G329400 Sobic001G329400 Sobic005G231500--Sobic001G329400 Sobic001G134100 Sobic001G134100 Sobic005G231500--Sobic001G134100 Sobic005G231500--Sobic004G356400 Sobic004G215800 Sobic004G215800 Sobic005G231500--Sobic004G215800 Sobic004G356400--Sobic001G017300 Sobic004G356400--Sobic005G101200 Sobic006G158100 Sobic006G158100 Sobic004G356400--Sobic006G158100 Sobic003G185900 Sobic003G185900 Sobic004G356400--Sobic003G185900 Sobic004G356400--Sobic007G105500 Sobic001G303200 Sobic001G303200 Sobic004G356400--Sobic001G303200 Sobic009G237100 Sobic009G237100 Sobic004G356400--Sobic009G237100 Sobic004G189800 Sobic004G189800 Sobic004G356400--Sobic004G189800 Sobic001G258200 Sobic001G258200 Sobic004G356400--Sobic001G258200 Sobic001G017300--Sobic006G158100 Sobic001G017300--Sobic004G356400 Sobic006G093800 Sobic006G093800 Sobic001G017300--Sobic006G093800 Sobic001G017300--Sobic010G249700 Sobic007G136200 Sobic007G136200 Sobic001G017300--Sobic007G136200 Sobic003G276300 Sobic003G276300 Sobic001G017300--Sobic003G276300 Sobic001G017300--Sobic005G101200 Sobic001G169900 Sobic001G169900 Sobic001G017300--Sobic001G169900 Sobic010G002700 Sobic010G002700 Sobic001G017300--Sobic010G002700 Sobic002G382700 Sobic002G382700 Sobic003G391200--Sobic002G382700 Sobic003G391200--Sobic005G206300 Sobic003G391200--Sobic005G101200 Sobic006G153400 Sobic006G153400 Sobic003G391200--Sobic006G153400 Sobic003G391200--Sobic001G017300 Sobic007G227100 Sobic007G227100 Sobic003G391200--Sobic007G227100 Sobic004G035900 Sobic004G035900 Sobic003G391200--Sobic004G035900 Sobic007G006400 Sobic007G006400 Sobic003G391200--Sobic007G006400 Sobic002G306800 Sobic002G306800 Sobic003G391200--Sobic002G306800 Sobic005G101200--Sobic004G189800 Sobic005G068700 Sobic005G068700 Sobic005G101200--Sobic005G068700 Sobic002G404800 Sobic002G404800 Sobic005G101200--Sobic002G404800 Sobic005G101200--Sobic001G258200 Sobic009G038900 Sobic009G038900 Sobic005G101200--Sobic009G038900 Sobic005G101200--Sobic007G105500 Sobic005G101200--Sobic003G185900 Sobic010G085100 Sobic010G085100 Sobic005G101200--Sobic010G085100 Sobic004G281800 Sobic004G281800 Sobic005G101200--Sobic004G281800 Sobic009G015100--Sobic007G105500 Sobic009G015100--Sobic005G231500 Sobic009G015100--Sobic005G206300 Sobic010G255300 Sobic010G255300 Sobic009G015100--Sobic010G255300 Sobic009G015100--Sobic004G281800 Sobic009G015100--Sobic005G101200 Sobic009G015100--Sobic010G085100 Sobic009G015100--Sobic002G404800 Sobic009G015100--Sobic004G356400 Sobic004G154200--Sobic003G367500 Sobic004G154200--Sobic003G185900 Sobic003G398800 Sobic003G398800 Sobic004G154200--Sobic003G398800 Sobic004G154200--Sobic007G105500 Sobic010G067100 Sobic010G067100 Sobic004G154200--Sobic010G067100 Sobic004G154200--Sobic005G231500 Sobic004G154200--Sobic010G085100 Sobic003G127800 Sobic003G127800 Sobic004G154200--Sobic003G127800 Sobic004G154200--Sobic001G329400 Sobic010G249700--Sobic001G017300 Sobic010G249700--Sobic005G101200 Sobic010G249700--Sobic007G105500 Sobic010G249700--Sobic006G093800 Sobic009G256100 Sobic009G256100 Sobic010G249700--Sobic009G256100 Sobic010G249700--Sobic010G255300 Sobic003G282000 Sobic003G282000 Sobic010G249700--Sobic003G282000 Sobic010G249700--Sobic002G382700 Sobic010G249700--Sobic004G356400 Sobic003G017100 Sobic003G017100 Sobic003G313300--Sobic003G017100 Sobic003G191700 Sobic003G191700 Sobic003G313300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G313300--Sobic010G176200 Sobic007G047400 Sobic007G047400 Sobic003G313300--Sobic007G047400 Sobic004G028500 Sobic004G028500 Sobic003G313300--Sobic004G028500 Sobic003G313300--Sobic001G017300 Sobic001G468700 Sobic001G468700 Sobic003G313300--Sobic001G468700 Sobic003G313300--Sobic010G002700 Sobic003G313300--Sobic005G206300
Octagon: transcription factors


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