Gene annotation
Transcriptome id Sobic.005G208801.1
Synonym -
Functional annotation -
UniProt A0A1Z5RKR7
Pfam PF01485
Panther DB PTHR11685 PTHR11685:SF131
NCBI CDD KOG1815; Predicted E3 ubiquitin ligase
KEGG Orthology K11968; ariadne-1
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT2G31510 : IBR domain-containing protein
RAP-DB (Rice) LOC_Os09g38630.1 : expressed protein
MaizeGDB (Corn) Zm00025a029172
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G294000 thioesterase family protein, putative, expressed -
2 Sobic.001G303750 - -
3 Sobic.001G116300 - -
4 Sobic.002G129500 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
5 Sobic.010G124600 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
6 Sobic.004G289200 OsSub43 - Putative Subtilisin homologue, expressed -
7 Sobic.008G008200 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
8 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
9 Sobic.002G129700 LTPL62 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
10 Sobic.010G048933 - -
11 Sobic.007G064600 cytochrome P450, putative, expressed -
12 Sobic.007G073300 OsSCP38 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
13 Sobic.003G179700 beta-galactosidase precursor, putative, expressed -
14 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.010G152900 beta-D-xylosidase, putative, expressed -
16 Sobic.008G087300 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
17 Sobic.003G239400 wax synthase isoform 3, putative, expressed -
18 Sobic.008G126000 calmodulin binding protein, putative, expressed -
19 Sobic.001G538000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
20 Sobic.004G167000 POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic005G208801 Sobic005G208801 Sobic004G294000 Sobic004G294000 Sobic005G208801--Sobic004G294000 Sobic001G303750 Sobic001G303750 Sobic005G208801--Sobic001G303750 Sobic001G116300 Sobic001G116300 Sobic005G208801--Sobic001G116300 Sobic002G129500 Sobic002G129500 Sobic005G208801--Sobic002G129500 Sobic010G124600 Sobic010G124600 Sobic005G208801--Sobic010G124600 Sobic004G289200 Sobic004G289200 Sobic005G208801--Sobic004G289200 Sobic008G008200 Sobic008G008200 Sobic005G208801--Sobic008G008200 Sobic009G239800 Sobic009G239800 Sobic005G208801--Sobic009G239800 Sobic002G129700 Sobic002G129700 Sobic005G208801--Sobic002G129700 Sobic010G048933 Sobic010G048933 Sobic004G294000--Sobic010G048933 Sobic004G294000--Sobic005G208801 Sobic004G294000--Sobic001G303750 Sobic004G294000--Sobic001G116300 Sobic001G209500 Sobic001G209500 Sobic004G294000--Sobic001G209500 Sobic005G208600 Sobic005G208600 Sobic004G294000--Sobic005G208600 Sobic004G294000--Sobic004G289200 Sobic007G044000 Sobic007G044000 Sobic004G294000--Sobic007G044000 Sobic002G071700 Sobic002G071700 Sobic004G294000--Sobic002G071700 Sobic001G303750--Sobic009G239800 Sobic001G303750--Sobic008G008200 Sobic008G087300 Sobic008G087300 Sobic001G303750--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic001G303750--Sobic004G167000 Sobic001G266900 Sobic001G266900 Sobic001G303750--Sobic001G266900 Sobic001G303750--Sobic002G129500 Sobic001G303750--Sobic002G129700 Sobic007G064600 Sobic007G064600 Sobic001G303750--Sobic007G064600 Sobic010G180000 Sobic010G180000 Sobic001G303750--Sobic010G180000 Sobic001G116300--Sobic001G303750 Sobic002G007400 Sobic002G007400 Sobic001G116300--Sobic002G007400 Sobic001G116300--Sobic004G289200 Sobic001G116300--Sobic002G129500 Sobic001G116300--Sobic002G129700 Sobic006G034200 Sobic006G034200 Sobic001G116300--Sobic006G034200 Sobic001G116300--Sobic005G208801 Sobic001G116300--Sobic007G064600 Sobic001G266500 Sobic001G266500 Sobic001G116300--Sobic001G266500 Sobic007G073300 Sobic007G073300 Sobic002G129500--Sobic007G073300 Sobic002G129500--Sobic002G129700 Sobic002G129500--Sobic007G064600 Sobic003G239400 Sobic003G239400 Sobic002G129500--Sobic003G239400 Sobic002G129600 Sobic002G129600 Sobic002G129500--Sobic002G129600 Sobic003G413400 Sobic003G413400 Sobic002G129500--Sobic003G413400 Sobic004G159200 Sobic004G159200 Sobic002G129500--Sobic004G159200 Sobic003G206200 Sobic003G206200 Sobic002G129500--Sobic003G206200 Sobic004G090700 Sobic004G090700 Sobic002G129500--Sobic004G090700 Sobic010G124600--Sobic004G167000 Sobic010G124600--Sobic008G087300 Sobic010G124600--Sobic001G266900 Sobic010G124600--Sobic008G008200 Sobic003G040400 Sobic003G040400 Sobic010G124600--Sobic003G040400 Sobic010G124600--Sobic010G180000 Sobic010G124600--Sobic009G239800 Sobic008G138300 Sobic008G138300 Sobic010G124600--Sobic008G138300 Sobic010G159500 Sobic010G159500 Sobic010G124600--Sobic010G159500 Sobic004G289200--Sobic001G116300 Sobic004G289200--Sobic002G007400 Sobic004G289200--Sobic001G303750 Sobic004G289200--Sobic002G129500 Sobic004G289200--Sobic005G208801 Sobic006G251301 Sobic006G251301 Sobic004G289200--Sobic006G251301 Sobic008G101850 Sobic008G101850 Sobic004G289200--Sobic008G101850 Sobic003G162500 Sobic003G162500 Sobic004G289200--Sobic003G162500 Sobic003G206100 Sobic003G206100 Sobic004G289200--Sobic003G206100 Sobic008G008200--Sobic008G087300 Sobic008G008200--Sobic004G167000 Sobic008G008200--Sobic010G180000 Sobic008G008200--Sobic001G266900 Sobic008G008200--Sobic009G239800 Sobic007G068700 Sobic007G068700 Sobic008G008200--Sobic007G068700 Sobic008G008200--Sobic008G138300 Sobic008G008200--Sobic003G162500 Sobic008G008200--Sobic010G159500 Sobic009G239800--Sobic008G008200 Sobic009G239800--Sobic008G087300 Sobic009G239800--Sobic004G167000 Sobic009G239800--Sobic001G303750 Sobic009G239800--Sobic010G180000 Sobic009G239800--Sobic001G266900 Sobic009G239800--Sobic007G068700 Sobic010G108100 Sobic010G108100 Sobic009G239800--Sobic010G108100 Sobic009G239800--Sobic008G138300 Sobic002G129700--Sobic003G239400 Sobic002G129700--Sobic007G064600 Sobic003G206000 Sobic003G206000 Sobic002G129700--Sobic003G206000 Sobic002G129700--Sobic007G073300 Sobic010G200000 Sobic010G200000 Sobic002G129700--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic002G129700--Sobic001G332050
Octagon: transcription factors


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