Gene annotation
Transcriptome id Sobic.005G230300.2
Synonym Sb05g027785
Functional annotation SCARECROW, putative, expressed
UniProt A0A1Z5RK46
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37650 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os11g47900.1 : SCARECROW, putative, expressed
MaizeGDB (Corn) Zm00025a029079 , Zm00025a029078
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
3 Sobic.003G240400 leaf senescence related protein, putative, expressed -
4 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
5 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
6 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
7 Sobic.002G118900 auxin-induced protein 5NG4, putative, expressed -
8 Sobic.002G115600 membrane protein, putative, expressed -
9 Sobic.006G196400 U-box, putative, expressed -
10 Sobic.005G182800 NB-ARC domain containing protein, expressed -
11 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
12 Sobic.003G140200 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.008G020000 - -
14 Sobic.003G095100 glycosyltransferase protein, putative, expressed -
15 Sobic.007G073000 - -
16 Sobic.004G322000 hypro1, putative, expressed -
17 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
18 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
19 Sobic.007G073100 amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
20 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase


Gene co-expression network
sample Sobic005G230300 Sobic005G230300 Sobic002G233200 Sobic002G233200 Sobic005G230300--Sobic002G233200 Sobic001G263300 Sobic001G263300 Sobic005G230300--Sobic001G263300 Sobic003G240400 Sobic003G240400 Sobic005G230300--Sobic003G240400 Sobic006G031100 Sobic006G031100 Sobic005G230300--Sobic006G031100 Sobic003G215300 Sobic003G215300 Sobic005G230300--Sobic003G215300 Sobic007G090600 Sobic007G090600 Sobic005G230300--Sobic007G090600 Sobic002G118900 Sobic002G118900 Sobic005G230300--Sobic002G118900 Sobic002G115600 Sobic002G115600 Sobic005G230300--Sobic002G115600 Sobic006G196400 Sobic006G196400 Sobic005G230300--Sobic006G196400 Sobic004G106100 Sobic004G106100 Sobic002G233200--Sobic004G106100 Sobic010G031700 Sobic010G031700 Sobic002G233200--Sobic010G031700 Sobic003G000100 Sobic003G000100 Sobic002G233200--Sobic003G000100 Sobic006G003100 Sobic006G003100 Sobic002G233200--Sobic006G003100 Sobic007G086300 Sobic007G086300 Sobic002G233200--Sobic007G086300 Sobic002G233200--Sobic003G240400 Sobic010G152400 Sobic010G152400 Sobic002G233200--Sobic010G152400 Sobic006G205700 Sobic006G205700 Sobic002G233200--Sobic006G205700 Sobic002G146000 Sobic002G146000 Sobic002G233200--Sobic002G146000 Sobic001G263300--Sobic003G240400 Sobic005G175900 Sobic005G175900 Sobic001G263300--Sobic005G175900 Sobic001G263300--Sobic003G215300 Sobic001G263300--Sobic002G115600 Sobic001G263300--Sobic007G090600 Sobic001G263300--Sobic006G196400 Sobic005G097600 Sobic005G097600 Sobic001G263300--Sobic005G097600 Sobic001G263300--Sobic006G031100 Sobic004G322000 Sobic004G322000 Sobic001G263300--Sobic004G322000 Sobic010G082000 Sobic010G082000 Sobic003G240400--Sobic010G082000 Sobic003G240400--Sobic003G215300 Sobic003G240400--Sobic001G263300 Sobic003G240400--Sobic006G196400 Sobic003G240400--Sobic007G090600 Sobic003G240400--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic003G240400--Sobic006G028500 Sobic003G240400--Sobic003G000100 Sobic008G035800 Sobic008G035800 Sobic003G240400--Sobic008G035800 Sobic006G031100--Sobic007G090600 Sobic006G031100--Sobic003G215300 Sobic006G031100--Sobic006G196400 Sobic002G029600 Sobic002G029600 Sobic006G031100--Sobic002G029600 Sobic004G014600 Sobic004G014600 Sobic006G031100--Sobic004G014600 Sobic005G182800 Sobic005G182800 Sobic006G031100--Sobic005G182800 Sobic006G085700 Sobic006G085700 Sobic006G031100--Sobic006G085700 Sobic006G031100--Sobic004G322000 Sobic006G031100--Sobic006G205700 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic003G215300--Sobic002G115600 Sobic003G215300--Sobic003G240400 Sobic003G215300--Sobic006G196400 Sobic003G215300--Sobic001G263300 Sobic007G073000 Sobic007G073000 Sobic003G215300--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic003G215300--Sobic001G503000 Sobic003G215300--Sobic002G029600 Sobic007G090600--Sobic006G031100 Sobic003G282300 Sobic003G282300 Sobic007G090600--Sobic003G282300 Sobic007G090600--Sobic004G322000 Sobic007G090600--Sobic003G215300 Sobic007G090600--Sobic004G014600 Sobic007G090600--Sobic006G196400 Sobic007G090600--Sobic006G205700 Sobic007G090600--Sobic003G240400 Sobic007G090600--Sobic002G115600 Sobic003G269900 Sobic003G269900 Sobic002G118900--Sobic003G269900 Sobic002G118900--Sobic002G115600 Sobic002G118900--Sobic001G263300 Sobic005G216500 Sobic005G216500 Sobic002G118900--Sobic005G216500 Sobic002G003400 Sobic002G003400 Sobic002G118900--Sobic002G003400 Sobic002G118900--Sobic006G196400 Sobic009G032900 Sobic009G032900 Sobic002G118900--Sobic009G032900 Sobic003G046700 Sobic003G046700 Sobic002G118900--Sobic003G046700 Sobic005G080600 Sobic005G080600 Sobic002G118900--Sobic005G080600 Sobic002G115600--Sobic003G215300 Sobic002G115600--Sobic006G196400 Sobic002G115600--Sobic001G263300 Sobic002G115600--Sobic007G090600 Sobic005G052700 Sobic005G052700 Sobic002G115600--Sobic005G052700 Sobic002G391400 Sobic002G391400 Sobic002G115600--Sobic002G391400 Sobic002G115600--Sobic002G118900 Sobic002G115600--Sobic006G205700 Sobic002G115600--Sobic005G175900 Sobic006G196400--Sobic006G031100 Sobic006G196400--Sobic007G090600 Sobic006G196400--Sobic005G080600 Sobic006G196400--Sobic003G240400 Sobic006G196400--Sobic003G215300 Sobic006G196400--Sobic002G115600 Sobic006G196400--Sobic005G175900 Sobic006G196400--Sobic010G082000 Sobic006G196400--Sobic006G205700
Octagon: transcription factors


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