Gene annotation
Transcriptome id Sobic.006G123100.1
Synonym P-glycoprotein, SbPGP17, Sb06g020350
Functional annotation "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA and ABA treatments" (PubMedID : 20528920)
ABC transporter, ATP-binding protein, putative, expressed
UniProt A0A1Z5RDZ0
Pfam PF00664 PF00005
Panther DB PTHR24221:SF236 PTHR24221
NCBI CDD -
KEGG Orthology K05658; ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
Gene Ontology GO:0006810; transport GO:0016021integral component of membrane GO:0005524ATP binding GO:0016887ATPase activity


Orthologs (automatic annotation)
TAIR AT3G28345 : ABC transporter family protein
RAP-DB (Rice) LOC_Os04g40570.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a057176 , Zm00025a056314 , Zm00025a032376 , Zm00025a005528 , Zm00025a009581
Brachypodium KQJ84902 , PNT61308 , KQK07666
Barley HORVU2Hr1G115180.1 , HORVU2Hr1G115180.2 , HORVU2Hr1G115180.3 , HORVU2Hr1G115180.4 , HORVU2Hr1G115180.5 , HORVU2Hr1G115180.7 , HORVU1Hr1G017460.1 , HORVU1Hr1G017460.3 , HORVU1Hr1G017460.2 , HORVU2Hr1G083130.1 , HORVU2Hr1G083120.8 , HORVU2Hr1G083120.9 , HORVU2Hr1G083120.6 , HORVU2Hr1G083120.7 , HORVU2Hr1G083120.4 , HORVU2Hr1G083120.5 , HORVU2Hr1G083120.2 , HORVU2Hr1G083120.3 , HORVU2Hr1G083120.1 , HORVU2Hr1G083120.10 , HORVU2Hr1G083120.11
Wheat TraesCS2B02G358200 , TraesCS2A02G323900 , TraesCS2A02G521400 , TraesCS2A02G521400 , TraesCS2A02G521400 , TraesCS4D02G296900 , TraesCS4D02G296900 , TraesCS2B02G341800 , TraesCS2B02G341800 , TraesCS1A02G081300 , TraesCS1B02G099000 , TraesCS1D02G082900 , TraesCS1D02G082900 , TraesCS1D02G082900 , TraesCS2D02G339000 , TraesCS2A02G344300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G083650 - -
2 Sobic.001G463650 - -
3 Sobic.006G249800 MBTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.003G350000 pentatricopeptide, putative, expressed -
5 Sobic.010G067950 - K14292: trimethylguanosine synthase
6 Sobic.004G355401 - -
7 Sobic.004G206900 expressed protein -
8 Sobic.004G128800 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
9 Sobic.002G339250 - -
10 Sobic.001G102901 - -
11 Sobic.010G263101 - -
12 Sobic.007G157550 - -
13 Sobic.004G347866 - -
14 Sobic.001G457100 - -
15 Sobic.009G005800 formin-like protein 6 precursor, putative, expressed -
16 Sobic.001G391000 aspartic proteinase nepenthesin precursor, putative, expressed -
17 Sobic.002G367850 - -
18 Sobic.008G119200 - -
19 Sobic.009G223700 - -
20 Sobic.005G066800 - -


Gene co-expression network
sample Sobic006G123100 Sobic006G123100 Sobic008G083650 Sobic008G083650 Sobic006G123100--Sobic008G083650 Sobic001G463650 Sobic001G463650 Sobic006G123100--Sobic001G463650 Sobic006G249800 Sobic006G249800 Sobic006G123100--Sobic006G249800 Sobic003G350000 Sobic003G350000 Sobic006G123100--Sobic003G350000 Sobic010G067950 Sobic010G067950 Sobic006G123100--Sobic010G067950 Sobic004G355401 Sobic004G355401 Sobic006G123100--Sobic004G355401 Sobic004G206900 Sobic004G206900 Sobic006G123100--Sobic004G206900 Sobic004G128800 Sobic004G128800 Sobic006G123100--Sobic004G128800 Sobic002G339250 Sobic002G339250 Sobic006G123100--Sobic002G339250 Sobic008G083650--Sobic006G123100 Sobic008G083650--Sobic001G463650 Sobic008G083650--Sobic003G350000 Sobic008G083650--Sobic004G355401 Sobic002G367850 Sobic002G367850 Sobic008G083650--Sobic002G367850 Sobic008G083650--Sobic010G067950 Sobic010G263101 Sobic010G263101 Sobic008G083650--Sobic010G263101 Sobic007G157550 Sobic007G157550 Sobic008G083650--Sobic007G157550 Sobic005G066800 Sobic005G066800 Sobic008G083650--Sobic005G066800 Sobic001G463650--Sobic008G083650 Sobic001G102901 Sobic001G102901 Sobic001G463650--Sobic001G102901 Sobic001G463650--Sobic006G249800 Sobic001G463650--Sobic006G123100 Sobic001G463650--Sobic010G263101 Sobic009G024133 Sobic009G024133 Sobic001G463650--Sobic009G024133 Sobic001G463650--Sobic010G067950 Sobic001G463650--Sobic003G350000 Sobic001G037550 Sobic001G037550 Sobic001G463650--Sobic001G037550 Sobic006G249800--Sobic010G263101 Sobic006G249800--Sobic001G463650 Sobic006G249800--Sobic008G083650 Sobic006G249800--Sobic006G123100 Sobic006G249800--Sobic001G102901 Sobic006G249800--Sobic003G350000 Sobic006G249800--Sobic001G037550 Sobic006G249800--Sobic009G024133 Sobic010G236800 Sobic010G236800 Sobic006G249800--Sobic010G236800 Sobic003G350000--Sobic008G083650 Sobic003G350000--Sobic010G263101 Sobic003G350000--Sobic010G067950 Sobic003G350000--Sobic006G123100 Sobic010G275600 Sobic010G275600 Sobic003G350000--Sobic010G275600 Sobic003G350000--Sobic001G037550 Sobic007G206550 Sobic007G206550 Sobic003G350000--Sobic007G206550 Sobic003G350000--Sobic004G355401 Sobic003G350000--Sobic007G157550 Sobic010G067950--Sobic008G083650 Sobic010G067950--Sobic007G157550 Sobic010G067950--Sobic003G350000 Sobic010G067950--Sobic004G355401 Sobic010G067950--Sobic001G102901 Sobic010G067950--Sobic007G206550 Sobic010G067950--Sobic005G066800 Sobic004G347866 Sobic004G347866 Sobic010G067950--Sobic004G347866 Sobic010G067950--Sobic002G367850 Sobic001G457100 Sobic001G457100 Sobic004G355401--Sobic001G457100 Sobic004G355401--Sobic007G157550 Sobic004G355401--Sobic004G347866 Sobic004G355401--Sobic004G206900 Sobic004G355401--Sobic005G066800 Sobic004G355401--Sobic007G206550 Sobic009G223700 Sobic009G223700 Sobic004G355401--Sobic009G223700 Sobic006G169300 Sobic006G169300 Sobic004G355401--Sobic006G169300 Sobic004G355401--Sobic002G339250 Sobic004G206900--Sobic002G339250 Sobic004G206900--Sobic004G347866 Sobic004G206900--Sobic007G157550 Sobic004G206900--Sobic001G457100 Sobic004G089700 Sobic004G089700 Sobic004G206900--Sobic004G089700 Sobic002G048250 Sobic002G048250 Sobic004G206900--Sobic002G048250 Sobic007G183000 Sobic007G183000 Sobic004G206900--Sobic007G183000 Sobic004G224300 Sobic004G224300 Sobic004G206900--Sobic004G224300 Sobic004G206900--Sobic009G223700 Sobic004G128800--Sobic006G169300 Sobic004G128800--Sobic009G223700 Sobic004G128800--Sobic001G457100 Sobic001G483700 Sobic001G483700 Sobic004G128800--Sobic001G483700 Sobic002G285525 Sobic002G285525 Sobic004G128800--Sobic002G285525 Sobic010G002850 Sobic010G002850 Sobic004G128800--Sobic010G002850 Sobic004G108900 Sobic004G108900 Sobic004G128800--Sobic004G108900 Sobic009G028600 Sobic009G028600 Sobic004G128800--Sobic009G028600 Sobic001G137200 Sobic001G137200 Sobic004G128800--Sobic001G137200 Sobic002G339250--Sobic004G347866 Sobic002G339250--Sobic004G089700 Sobic002G339250--Sobic002G048250 Sobic002G339250--Sobic001G457100 Sobic004G226300 Sobic004G226300 Sobic002G339250--Sobic004G226300 Sobic002G339250--Sobic007G183000 Sobic002G339250--Sobic007G157550 Sobic001G527400 Sobic001G527400 Sobic002G339250--Sobic001G527400 Sobic002G339250--Sobic004G206900
Octagon: transcription factors


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