Gene annotation
Transcriptome id Sobic.001G463650.1,Sobic.001G463650.2
Synonym -
Functional annotation -
UniProt A0A1Z5SAV9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G083650 - -
2 Sobic.001G102901 - -
3 Sobic.006G249800 MBTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.006G123100 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
5 Sobic.010G263101 - -
6 Sobic.009G024133 - -
7 Sobic.010G067950 - K14292: trimethylguanosine synthase
8 Sobic.003G350000 pentatricopeptide, putative, expressed -
9 Sobic.001G037550 - -
10 Sobic.004G355401 - -
11 Sobic.009G188750 - -
12 Sobic.002G367850 - -
13 Sobic.007G124800 MLA1, putative, expressed -
14 Sobic.005G126401 - -
15 Sobic.005G066800 - -
16 Sobic.001G174300 GRAS family transcription factor containing protein, expressed -
17 Sobic.007G136400 - -
18 Sobic.008G108000 expressed protein -
19 Sobic.004G128800 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
20 Sobic.006G185700 copper chaperone for superoxide dismutase, putative, expressed K04569: copper chaperone for superoxide dismutase


Gene co-expression network
sample Sobic001G463650 Sobic001G463650 Sobic008G083650 Sobic008G083650 Sobic001G463650--Sobic008G083650 Sobic001G102901 Sobic001G102901 Sobic001G463650--Sobic001G102901 Sobic006G249800 Sobic006G249800 Sobic001G463650--Sobic006G249800 Sobic006G123100 Sobic006G123100 Sobic001G463650--Sobic006G123100 Sobic010G263101 Sobic010G263101 Sobic001G463650--Sobic010G263101 Sobic009G024133 Sobic009G024133 Sobic001G463650--Sobic009G024133 Sobic010G067950 Sobic010G067950 Sobic001G463650--Sobic010G067950 Sobic003G350000 Sobic003G350000 Sobic001G463650--Sobic003G350000 Sobic001G037550 Sobic001G037550 Sobic001G463650--Sobic001G037550 Sobic008G083650--Sobic006G123100 Sobic008G083650--Sobic001G463650 Sobic008G083650--Sobic003G350000 Sobic004G355401 Sobic004G355401 Sobic008G083650--Sobic004G355401 Sobic002G367850 Sobic002G367850 Sobic008G083650--Sobic002G367850 Sobic008G083650--Sobic010G067950 Sobic008G083650--Sobic010G263101 Sobic007G157550 Sobic007G157550 Sobic008G083650--Sobic007G157550 Sobic005G066800 Sobic005G066800 Sobic008G083650--Sobic005G066800 Sobic001G102901--Sobic001G463650 Sobic001G102901--Sobic010G067950 Sobic001G102901--Sobic008G083650 Sobic001G102901--Sobic006G249800 Sobic001G102901--Sobic006G123100 Sobic001G102901--Sobic010G263101 Sobic001G102901--Sobic009G024133 Sobic001G102901--Sobic004G355401 Sobic001G102901--Sobic003G350000 Sobic006G249800--Sobic010G263101 Sobic006G249800--Sobic001G463650 Sobic006G249800--Sobic008G083650 Sobic006G249800--Sobic006G123100 Sobic006G249800--Sobic001G102901 Sobic006G249800--Sobic003G350000 Sobic006G249800--Sobic001G037550 Sobic006G249800--Sobic009G024133 Sobic010G236800 Sobic010G236800 Sobic006G249800--Sobic010G236800 Sobic006G123100--Sobic008G083650 Sobic006G123100--Sobic001G463650 Sobic006G123100--Sobic006G249800 Sobic006G123100--Sobic003G350000 Sobic006G123100--Sobic010G067950 Sobic006G123100--Sobic004G355401 Sobic004G206900 Sobic004G206900 Sobic006G123100--Sobic004G206900 Sobic004G128800 Sobic004G128800 Sobic006G123100--Sobic004G128800 Sobic002G339250 Sobic002G339250 Sobic006G123100--Sobic002G339250 Sobic010G263101--Sobic006G249800 Sobic010G263101--Sobic003G350000 Sobic010G275600 Sobic010G275600 Sobic010G263101--Sobic010G275600 Sobic010G263101--Sobic008G083650 Sobic010G263101--Sobic001G037550 Sobic010G263101--Sobic001G463650 Sobic010G263101--Sobic006G123100 Sobic010G263101--Sobic001G102901 Sobic010G263101--Sobic010G067950 Sobic009G188750 Sobic009G188750 Sobic009G024133--Sobic009G188750 Sobic006G185700 Sobic006G185700 Sobic009G024133--Sobic006G185700 Sobic007G136400 Sobic007G136400 Sobic009G024133--Sobic007G136400 Sobic009G144050 Sobic009G144050 Sobic009G024133--Sobic009G144050 Sobic005G126401 Sobic005G126401 Sobic009G024133--Sobic005G126401 Sobic002G161200 Sobic002G161200 Sobic009G024133--Sobic002G161200 Sobic001G243300 Sobic001G243300 Sobic009G024133--Sobic001G243300 Sobic001G422800 Sobic001G422800 Sobic009G024133--Sobic001G422800 Sobic010G097800 Sobic010G097800 Sobic009G024133--Sobic010G097800 Sobic010G067950--Sobic008G083650 Sobic010G067950--Sobic007G157550 Sobic010G067950--Sobic003G350000 Sobic010G067950--Sobic004G355401 Sobic010G067950--Sobic001G102901 Sobic007G206550 Sobic007G206550 Sobic010G067950--Sobic007G206550 Sobic010G067950--Sobic005G066800 Sobic004G347866 Sobic004G347866 Sobic010G067950--Sobic004G347866 Sobic010G067950--Sobic002G367850 Sobic003G350000--Sobic008G083650 Sobic003G350000--Sobic010G263101 Sobic003G350000--Sobic010G067950 Sobic003G350000--Sobic006G123100 Sobic003G350000--Sobic010G275600 Sobic003G350000--Sobic001G037550 Sobic003G350000--Sobic007G206550 Sobic003G350000--Sobic004G355401 Sobic003G350000--Sobic007G157550 Sobic001G037550--Sobic010G275600 Sobic008G108000 Sobic008G108000 Sobic001G037550--Sobic008G108000 Sobic001G037550--Sobic010G263101 Sobic001G040701 Sobic001G040701 Sobic001G037550--Sobic001G040701 Sobic001G037550--Sobic008G083650 Sobic001G075900 Sobic001G075900 Sobic001G037550--Sobic001G075900 Sobic007G124800 Sobic007G124800 Sobic001G037550--Sobic007G124800 Sobic008G086300 Sobic008G086300 Sobic001G037550--Sobic008G086300 Sobic001G037550--Sobic002G367850
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.