Gene annotation
Transcriptome id Sobic.006G249800.1
Synonym BPM1, ATBPM1
Functional annotation MBTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt A0A1Z5RFG8
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF154
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G03740 : BTB-POZ and MATH domain 4
RAP-DB (Rice) LOC_Os02g20720.1 : MBTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G263101 - -
2 Sobic.001G463650 - -
3 Sobic.008G083650 - -
4 Sobic.006G123100 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
5 Sobic.001G102901 - -
6 Sobic.003G350000 pentatricopeptide, putative, expressed -
7 Sobic.001G037550 - -
8 Sobic.009G024133 - -
9 Sobic.010G236800 protein kinase family protein, putative, expressed -
10 Sobic.010G275600 resistance protein, putative, expressed -
11 Sobic.009G188750 - -
12 Sobic.007G136400 - -
13 Sobic.006G244900 expressed protein -
14 Sobic.004G007550 - -
15 Sobic.010G067950 - K14292: trimethylguanosine synthase
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic006G249800 Sobic006G249800 Sobic010G263101 Sobic010G263101 Sobic006G249800--Sobic010G263101 Sobic001G463650 Sobic001G463650 Sobic006G249800--Sobic001G463650 Sobic008G083650 Sobic008G083650 Sobic006G249800--Sobic008G083650 Sobic006G123100 Sobic006G123100 Sobic006G249800--Sobic006G123100 Sobic001G102901 Sobic001G102901 Sobic006G249800--Sobic001G102901 Sobic003G350000 Sobic003G350000 Sobic006G249800--Sobic003G350000 Sobic001G037550 Sobic001G037550 Sobic006G249800--Sobic001G037550 Sobic009G024133 Sobic009G024133 Sobic006G249800--Sobic009G024133 Sobic010G236800 Sobic010G236800 Sobic006G249800--Sobic010G236800 Sobic010G263101--Sobic006G249800 Sobic010G263101--Sobic003G350000 Sobic010G275600 Sobic010G275600 Sobic010G263101--Sobic010G275600 Sobic010G263101--Sobic008G083650 Sobic010G263101--Sobic001G037550 Sobic010G263101--Sobic001G463650 Sobic010G263101--Sobic006G123100 Sobic010G263101--Sobic001G102901 Sobic010G067950 Sobic010G067950 Sobic010G263101--Sobic010G067950 Sobic001G463650--Sobic008G083650 Sobic001G463650--Sobic001G102901 Sobic001G463650--Sobic006G249800 Sobic001G463650--Sobic006G123100 Sobic001G463650--Sobic010G263101 Sobic001G463650--Sobic009G024133 Sobic001G463650--Sobic010G067950 Sobic001G463650--Sobic003G350000 Sobic001G463650--Sobic001G037550 Sobic008G083650--Sobic006G123100 Sobic008G083650--Sobic001G463650 Sobic008G083650--Sobic003G350000 Sobic004G355401 Sobic004G355401 Sobic008G083650--Sobic004G355401 Sobic002G367850 Sobic002G367850 Sobic008G083650--Sobic002G367850 Sobic008G083650--Sobic010G067950 Sobic008G083650--Sobic010G263101 Sobic007G157550 Sobic007G157550 Sobic008G083650--Sobic007G157550 Sobic005G066800 Sobic005G066800 Sobic008G083650--Sobic005G066800 Sobic006G123100--Sobic008G083650 Sobic006G123100--Sobic001G463650 Sobic006G123100--Sobic006G249800 Sobic006G123100--Sobic003G350000 Sobic006G123100--Sobic010G067950 Sobic006G123100--Sobic004G355401 Sobic004G206900 Sobic004G206900 Sobic006G123100--Sobic004G206900 Sobic004G128800 Sobic004G128800 Sobic006G123100--Sobic004G128800 Sobic002G339250 Sobic002G339250 Sobic006G123100--Sobic002G339250 Sobic001G102901--Sobic001G463650 Sobic001G102901--Sobic010G067950 Sobic001G102901--Sobic008G083650 Sobic001G102901--Sobic006G249800 Sobic001G102901--Sobic006G123100 Sobic001G102901--Sobic010G263101 Sobic001G102901--Sobic009G024133 Sobic001G102901--Sobic004G355401 Sobic001G102901--Sobic003G350000 Sobic003G350000--Sobic008G083650 Sobic003G350000--Sobic010G263101 Sobic003G350000--Sobic010G067950 Sobic003G350000--Sobic006G123100 Sobic003G350000--Sobic010G275600 Sobic003G350000--Sobic001G037550 Sobic007G206550 Sobic007G206550 Sobic003G350000--Sobic007G206550 Sobic003G350000--Sobic004G355401 Sobic003G350000--Sobic007G157550 Sobic001G037550--Sobic010G275600 Sobic008G108000 Sobic008G108000 Sobic001G037550--Sobic008G108000 Sobic001G037550--Sobic010G263101 Sobic001G040701 Sobic001G040701 Sobic001G037550--Sobic001G040701 Sobic001G037550--Sobic008G083650 Sobic001G075900 Sobic001G075900 Sobic001G037550--Sobic001G075900 Sobic007G124800 Sobic007G124800 Sobic001G037550--Sobic007G124800 Sobic008G086300 Sobic008G086300 Sobic001G037550--Sobic008G086300 Sobic001G037550--Sobic002G367850 Sobic009G188750 Sobic009G188750 Sobic009G024133--Sobic009G188750 Sobic006G185700 Sobic006G185700 Sobic009G024133--Sobic006G185700 Sobic007G136400 Sobic007G136400 Sobic009G024133--Sobic007G136400 Sobic009G144050 Sobic009G144050 Sobic009G024133--Sobic009G144050 Sobic005G126401 Sobic005G126401 Sobic009G024133--Sobic005G126401 Sobic002G161200 Sobic002G161200 Sobic009G024133--Sobic002G161200 Sobic001G243300 Sobic001G243300 Sobic009G024133--Sobic001G243300 Sobic001G422800 Sobic001G422800 Sobic009G024133--Sobic001G422800 Sobic010G097800 Sobic010G097800 Sobic009G024133--Sobic010G097800 Sobic010G236800--Sobic009G188750 Sobic010G011001 Sobic010G011001 Sobic010G236800--Sobic010G011001 Sobic009G011000 Sobic009G011000 Sobic010G236800--Sobic009G011000 Sobic001G506066 Sobic001G506066 Sobic010G236800--Sobic001G506066 Sobic009G011100 Sobic009G011100 Sobic010G236800--Sobic009G011100 Sobic009G011200 Sobic009G011200 Sobic010G236800--Sobic009G011200 Sobic001G452600 Sobic001G452600 Sobic010G236800--Sobic001G452600 Sobic003G053750 Sobic003G053750 Sobic010G236800--Sobic003G053750 Sobic010G236800--Sobic006G185700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.