Gene annotation
Transcriptome id Sobic.006G177500.1
Synonym Sb06g025220, CPK29
Functional annotation calcium-dependent protein kinase 29( (PubMedID : 26759170,(PubMedID : 24597475)
CAMK_CAMK_like.26 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5YDX9
Pfam PF07714 PF13499
Panther DB PTHR24349 PTHR24349:SF89
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G76040 : calcium-dependent protein kinase 29
RAP-DB (Rice) LOC_Os04g47300.1 : CAMK_CAMK_like.26 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a028374 , Zm00025a043932 , Zm00025a032358 , Zm00025a037757 , Zm00025a017091 , Zm00025a047650 , Zm00025a016615 , Zm00025a032700 , Zm00025a056829 , Zm00025a010059
Brachypodium KQK10428 , KQJ84031 , KQJ89539 , KQJ84030 , KQJ84217
Barley HORVU1Hr1G070840.3 , HORVU1Hr1G070840.4 , HORVU6Hr1G094990.7 , HORVU6Hr1G094990.5 , HORVU5Hr1G018340.5 , HORVU5Hr1G018340.4 , HORVU5Hr1G018340.7 , HORVU5Hr1G018340.6 , HORVU5Hr1G018340.1 , HORVU5Hr1G018340.2 , HORVU2Hr1G096270.10 , HORVU2Hr1G096270.11 , HORVU6Hr1G094990.6 , HORVU6Hr1G094990.4 , HORVU6Hr1G094990.1 , HORVU6Hr1G094990.8 , HORVU1Hr1G070840.2 , HORVU4Hr1G004540.9 , HORVU4Hr1G004540.8 , HORVU4Hr1G004540.3 , HORVU4Hr1G004540.1 , HORVU1Hr1G070840.1 , HORVU4Hr1G004540.19 , HORVU4Hr1G004540.18 , HORVU4Hr1G004540.13 , HORVU4Hr1G004540.10 , HORVU4Hr1G004540.17 , HORVU4Hr1G004540.16 , HORVU4Hr1G004540.15 , HORVU4Hr1G004540.14 , HORVU2Hr1G096270.8 , HORVU2Hr1G096270.9 , HORVU2Hr1G096270.1 , HORVU2Hr1G096270.2 , HORVU2Hr1G096270.3 , HORVU2Hr1G096270.4 , HORVU2Hr1G096270.5 , HORVU2Hr1G096270.6 , HORVU2Hr1G096270.7 , HORVU6Hr1G094990.3 , HORVU6Hr1G094990.2 , HORVU4Hr1G004540.20 , HORVU0Hr1G011570.4 , HORVU0Hr1G011570.5 , HORVU0Hr1G011570.1 , HORVU0Hr1G011570.2 , HORVU0Hr1G011570.3 , HORVU5Hr1G078430.3 , HORVU5Hr1G078430.2 , HORVU5Hr1G078430.5 , HORVU5Hr1G078430.4 , HORVU5Hr1G078430.6
Wheat TraesCS3A02G351300 , TraesCS1D02G290700 , TraesCS4A02G283400 , TraesCS2A02G407200 , TraesCS5D02G434500 , TraesCS1A02G292200 , TraesCS1A02G292200 , TraesCS4D02G027600 , TraesCS1B02G301600 , TraesCS5D02G305200 , TraesCS5A02G298500 , TraesCS2D02G456400 , TraesCS4B02G030100 , TraesCS5D02G434500 , TraesCS6B02G467300 , TraesCS6D02G404800 , TraesCS4B02G030100 , TraesCS5B02G428400 , TraesCS5B02G428400 , TraesCS3D02G345500 , TraesCS5B02G297700 , TraesCS6A02G261200 , TraesCS6D02G242000 , TraesCS6D02G242000 , TraesCS2B02G478100 , TraesCS6A02G421000 , TraesCS5A02G426500 , TraesCS5A02G069500 , TraesCS2D02G404200 , TraesCS2B02G424900 , TraesCS3B02G383800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G146500 beta-galactosidase, putative, expressed -
2 Sobic.008G083100 expressed protein -
3 Sobic.003G096950 - -
4 Sobic.004G193350 - -
5 Sobic.009G074800 - -
6 Sobic.005G137500 - -
7 Sobic.003G401700 - -
8 Sobic.004G299850 - -
9 Sobic.008G113200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.001G001800 expressed protein -
11 Sobic.010G183350 - -
12 Sobic.001G476600 Zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
13 Sobic.009G026700 expressed protein -
14 Sobic.007G182300 Plant PDR ABC transporter associated domain containing protein, expressed -
15 Sobic.009G137401 - -
16 Sobic.002G324801 - -
17 Sobic.003G272000 expressed protein -
18 Sobic.006G268900 "STKc_IRAK, catalytic domain of the serine/threonine kinases"(PubMedID : 29491869)@expressed protein -
19 Sobic.003G386400 - -
20 Sobic.001G191500 expressed protein -


Gene co-expression network
sample Sobic006G177500 Sobic006G177500 Sobic009G146500 Sobic009G146500 Sobic006G177500--Sobic009G146500 Sobic008G083100 Sobic008G083100 Sobic006G177500--Sobic008G083100 Sobic003G096950 Sobic003G096950 Sobic006G177500--Sobic003G096950 Sobic004G193350 Sobic004G193350 Sobic006G177500--Sobic004G193350 Sobic009G074800 Sobic009G074800 Sobic006G177500--Sobic009G074800 Sobic005G137500 Sobic005G137500 Sobic006G177500--Sobic005G137500 Sobic003G401700 Sobic003G401700 Sobic006G177500--Sobic003G401700 Sobic004G299850 Sobic004G299850 Sobic006G177500--Sobic004G299850 Sobic008G113200 Sobic008G113200 Sobic006G177500--Sobic008G113200 Sobic009G146500--Sobic003G096950 Sobic001G190900 Sobic001G190900 Sobic009G146500--Sobic001G190900 Sobic006G072701 Sobic006G072701 Sobic009G146500--Sobic006G072701 Sobic009G146500--Sobic008G083100 Sobic001G191500 Sobic001G191500 Sobic009G146500--Sobic001G191500 Sobic007G182300 Sobic007G182300 Sobic009G146500--Sobic007G182300 Sobic009G137401 Sobic009G137401 Sobic009G146500--Sobic009G137401 Sobic003G312900 Sobic003G312900 Sobic009G146500--Sobic003G312900 Sobic002G324801 Sobic002G324801 Sobic009G146500--Sobic002G324801 Sobic008G083100--Sobic006G072701 Sobic004G033650 Sobic004G033650 Sobic008G083100--Sobic004G033650 Sobic008G083100--Sobic001G191500 Sobic008G083100--Sobic008G113200 Sobic008G083100--Sobic009G074800 Sobic009G026700 Sobic009G026700 Sobic008G083100--Sobic009G026700 Sobic008G083100--Sobic007G182300 Sobic002G226200 Sobic002G226200 Sobic008G083100--Sobic002G226200 Sobic004G255550 Sobic004G255550 Sobic008G083100--Sobic004G255550 Sobic003G096950--Sobic007G182300 Sobic003G096950--Sobic006G072701 Sobic004G084600 Sobic004G084600 Sobic003G096950--Sobic004G084600 Sobic006G111000 Sobic006G111000 Sobic003G096950--Sobic006G111000 Sobic003G096950--Sobic009G146500 Sobic001G037033 Sobic001G037033 Sobic003G096950--Sobic001G037033 Sobic003G096950--Sobic008G083100 Sobic008G067000 Sobic008G067000 Sobic003G096950--Sobic008G067000 Sobic006G041200 Sobic006G041200 Sobic003G096950--Sobic006G041200 Sobic002G159750 Sobic002G159750 Sobic004G193350--Sobic002G159750 Sobic003G238750 Sobic003G238750 Sobic004G193350--Sobic003G238750 Sobic004G322650 Sobic004G322650 Sobic004G193350--Sobic004G322650 Sobic001G476800 Sobic001G476800 Sobic004G193350--Sobic001G476800 Sobic004G193350--Sobic005G137500 Sobic008G171200 Sobic008G171200 Sobic004G193350--Sobic008G171200 Sobic010G175550 Sobic010G175550 Sobic004G193350--Sobic010G175550 Sobic003G286450 Sobic003G286450 Sobic004G193350--Sobic003G286450 Sobic003G016950 Sobic003G016950 Sobic004G193350--Sobic003G016950 Sobic008G190600 Sobic008G190600 Sobic009G074800--Sobic008G190600 Sobic009G074800--Sobic009G026700 Sobic009G074800--Sobic004G033650 Sobic009G074800--Sobic008G083100 Sobic003G272000 Sobic003G272000 Sobic009G074800--Sobic003G272000 Sobic009G074800--Sobic006G072701 Sobic001G250750 Sobic001G250750 Sobic009G074800--Sobic001G250750 Sobic001G001800 Sobic001G001800 Sobic009G074800--Sobic001G001800 Sobic003G375500 Sobic003G375500 Sobic009G074800--Sobic003G375500 Sobic010G183350 Sobic010G183350 Sobic005G137500--Sobic010G183350 Sobic001G059001 Sobic001G059001 Sobic005G137500--Sobic001G059001 Sobic005G137500--Sobic004G193350 Sobic009G064300 Sobic009G064300 Sobic005G137500--Sobic009G064300 Sobic002G012100 Sobic002G012100 Sobic005G137500--Sobic002G012100 Sobic001G476600 Sobic001G476600 Sobic005G137500--Sobic001G476600 Sobic005G152866 Sobic005G152866 Sobic005G137500--Sobic005G152866 Sobic006G268900 Sobic006G268900 Sobic005G137500--Sobic006G268900 Sobic003G312800 Sobic003G312800 Sobic005G137500--Sobic003G312800 Sobic003G401700--Sobic010G183350 Sobic003G401700--Sobic009G074800 Sobic009G026600 Sobic009G026600 Sobic003G401700--Sobic009G026600 Sobic003G401700--Sobic003G375500 Sobic005G027350 Sobic005G027350 Sobic003G401700--Sobic005G027350 Sobic003G401700--Sobic009G026700 Sobic001G460900 Sobic001G460900 Sobic003G401700--Sobic001G460900 Sobic003G401700--Sobic004G033650 Sobic001G090700 Sobic001G090700 Sobic003G401700--Sobic001G090700 Sobic009G029100 Sobic009G029100 Sobic004G299850--Sobic009G029100 Sobic001G167000 Sobic001G167000 Sobic004G299850--Sobic001G167000 Sobic003G412500 Sobic003G412500 Sobic004G299850--Sobic003G412500 Sobic001G011600 Sobic001G011600 Sobic004G299850--Sobic001G011600 Sobic003G330350 Sobic003G330350 Sobic004G299850--Sobic003G330350 Sobic006G258600 Sobic006G258600 Sobic004G299850--Sobic006G258600 Sobic004G299850--Sobic002G012100 Sobic006G130100 Sobic006G130100 Sobic004G299850--Sobic006G130100 Sobic006G131700 Sobic006G131700 Sobic004G299850--Sobic006G131700 Sobic008G113200--Sobic004G255550 Sobic008G113200--Sobic008G083100 Sobic004G030850 Sobic004G030850 Sobic008G113200--Sobic004G030850 Sobic008G113200--Sobic006G111000 Sobic003G336550 Sobic003G336550 Sobic008G113200--Sobic003G336550 Sobic008G113200--Sobic002G226200 Sobic008G113200--Sobic004G084600 Sobic009G192400 Sobic009G192400 Sobic008G113200--Sobic009G192400 Sobic008G113200--Sobic009G137401
Octagon: transcription factors


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