Gene annotation
Transcriptome id Sobic.006G236900.1
Synonym Sb06g030370
Functional annotation gibberellin 20 oxidase 2, putative, expressed
UniProt C5Y8Z6
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF188
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G10490 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os04g55070.1 : gibberellin 20 oxidase 2, putative, expressed
MaizeGDB (Corn) Zm00025a057184 , Zm00025a009574
Brachypodium -
Barley -
Wheat TraesCS3D02G074300 , TraesCS3D02G074300 , TraesCS2A02G519900 , TraesCS2B02G548100 , TraesCS2D02G521300 , TraesCS2B02G548800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G068200 bfr-2, putative, expressed -
2 Sobic.003G278633 - -
3 Sobic.001G406500 MBTB57 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.003G297400 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
5 Sobic.007G138200 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
6 Sobic.002G259900 expressed protein -
7 Sobic.001G165301 - -
8 Sobic.001G261464 - -
9 Sobic.008G139250 - -
10 Sobic.001G515350 - -
11 Sobic.007G192800 nuclear transport factor, putative, expressed -
12 Sobic.002G322600 harpin-induced protein 1 domain containing protein, expressed -
13 Sobic.003G126750 - -
14 Sobic.005G031901 - -
15 Sobic.004G095400 calcium-binding EF hand family protein, putative, expressed -
16 Sobic.004G243700 - -
17 Sobic.010G147300 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
18 Sobic.001G018350 - -
19 Sobic.004G358301 - -
20 Sobic.003G315000 homeobox-leucine zipper protein ATHB-54, putative, expressed -


Gene co-expression network
sample Sobic006G236900 Sobic006G236900 Sobic004G068200 Sobic004G068200 Sobic006G236900--Sobic004G068200 Sobic003G278633 Sobic003G278633 Sobic006G236900--Sobic003G278633 Sobic001G406500 Sobic001G406500 Sobic006G236900--Sobic001G406500 Sobic003G297400 Sobic003G297400 Sobic006G236900--Sobic003G297400 Sobic007G138200 Sobic007G138200 Sobic006G236900--Sobic007G138200 Sobic002G259900 Sobic002G259900 Sobic006G236900--Sobic002G259900 Sobic001G165301 Sobic001G165301 Sobic006G236900--Sobic001G165301 Sobic001G261464 Sobic001G261464 Sobic006G236900--Sobic001G261464 Sobic008G139250 Sobic008G139250 Sobic006G236900--Sobic008G139250 Sobic001G370500 Sobic001G370500 Sobic004G068200--Sobic001G370500 Sobic002G293400 Sobic002G293400 Sobic004G068200--Sobic002G293400 Sobic004G068200--Sobic003G278633 Sobic009G018100 Sobic009G018100 Sobic004G068200--Sobic009G018100 Sobic003G315000 Sobic003G315000 Sobic004G068200--Sobic003G315000 Sobic004G068200--Sobic006G236900 Sobic009G172100 Sobic009G172100 Sobic004G068200--Sobic009G172100 Sobic001G095566 Sobic001G095566 Sobic004G068200--Sobic001G095566 Sobic005G156201 Sobic005G156201 Sobic004G068200--Sobic005G156201 Sobic003G278633--Sobic009G018100 Sobic003G278633--Sobic002G259900 Sobic009G066700 Sobic009G066700 Sobic003G278633--Sobic009G066700 Sobic004G273550 Sobic004G273550 Sobic003G278633--Sobic004G273550 Sobic006G118150 Sobic006G118150 Sobic003G278633--Sobic006G118150 Sobic002G097500 Sobic002G097500 Sobic003G278633--Sobic002G097500 Sobic008G016400 Sobic008G016400 Sobic003G278633--Sobic008G016400 Sobic010G015400 Sobic010G015400 Sobic003G278633--Sobic010G015400 Sobic007G224700 Sobic007G224700 Sobic003G278633--Sobic007G224700 Sobic002G026150 Sobic002G026150 Sobic001G406500--Sobic002G026150 Sobic003G126750 Sobic003G126750 Sobic001G406500--Sobic003G126750 Sobic005G031901 Sobic005G031901 Sobic001G406500--Sobic005G031901 Sobic006G109600 Sobic006G109600 Sobic001G406500--Sobic006G109600 Sobic010G147300 Sobic010G147300 Sobic001G406500--Sobic010G147300 Sobic001G406500--Sobic001G261464 Sobic002G100100 Sobic002G100100 Sobic001G406500--Sobic002G100100 Sobic004G358301 Sobic004G358301 Sobic001G406500--Sobic004G358301 Sobic004G243700 Sobic004G243700 Sobic001G406500--Sobic004G243700 Sobic010G003000 Sobic010G003000 Sobic003G297400--Sobic010G003000 Sobic002G292500 Sobic002G292500 Sobic003G297400--Sobic002G292500 Sobic004G348500 Sobic004G348500 Sobic003G297400--Sobic004G348500 Sobic003G039100 Sobic003G039100 Sobic003G297400--Sobic003G039100 Sobic001G096700 Sobic001G096700 Sobic003G297400--Sobic001G096700 Sobic002G266400 Sobic002G266400 Sobic003G297400--Sobic002G266400 Sobic003G297400--Sobic006G236900 Sobic008G165800 Sobic008G165800 Sobic003G297400--Sobic008G165800 Sobic006G078200 Sobic006G078200 Sobic003G297400--Sobic006G078200 Sobic001G515350 Sobic001G515350 Sobic007G138200--Sobic001G515350 Sobic001G398100 Sobic001G398100 Sobic007G138200--Sobic001G398100 Sobic004G095400 Sobic004G095400 Sobic007G138200--Sobic004G095400 Sobic003G443601 Sobic003G443601 Sobic007G138200--Sobic003G443601 Sobic002G244901 Sobic002G244901 Sobic007G138200--Sobic002G244901 Sobic007G138200--Sobic004G273550 Sobic007G138200--Sobic002G259900 Sobic008G068133 Sobic008G068133 Sobic007G138200--Sobic008G068133 Sobic006G151100 Sobic006G151100 Sobic007G138200--Sobic006G151100 Sobic002G259900--Sobic003G278633 Sobic002G259900--Sobic003G443601 Sobic002G259900--Sobic008G016400 Sobic009G216200 Sobic009G216200 Sobic002G259900--Sobic009G216200 Sobic002G259900--Sobic006G118150 Sobic008G141700 Sobic008G141700 Sobic002G259900--Sobic008G141700 Sobic002G259900--Sobic007G138200 Sobic002G259900--Sobic006G151100 Sobic002G259900--Sobic007G224700 Sobic001G018350 Sobic001G018350 Sobic001G165301--Sobic001G018350 Sobic001G165301--Sobic005G031901 Sobic001G165301--Sobic006G109600 Sobic001G165301--Sobic003G126750 Sobic001G165301--Sobic010G147300 Sobic001G165301--Sobic001G261464 Sobic001G165301--Sobic004G358301 Sobic001G165301--Sobic002G100100 Sobic001G165301--Sobic002G026150 Sobic001G261464--Sobic005G031901 Sobic001G261464--Sobic003G126750 Sobic001G261464--Sobic006G109600 Sobic001G261464--Sobic002G100100 Sobic001G261464--Sobic010G147300 Sobic004G358200 Sobic004G358200 Sobic001G261464--Sobic004G358200 Sobic001G261464--Sobic004G358301 Sobic001G261464--Sobic004G243700 Sobic001G261464--Sobic002G026150 Sobic008G139250--Sobic005G031901 Sobic008G139250--Sobic001G261464 Sobic008G139250--Sobic003G126750 Sobic008G139250--Sobic006G109600 Sobic008G139250--Sobic004G358200 Sobic008G139250--Sobic010G147300 Sobic008G139250--Sobic002G100100 Sobic008G079733 Sobic008G079733 Sobic008G139250--Sobic008G079733 Sobic008G139250--Sobic002G026150
Octagon: transcription factors


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