Gene annotation
Transcriptome id Sobic.007G192800.1
Synonym Sb07g026170, NTF2B
Functional annotation nuclear transport factor, putative, expressed
UniProt C5YHS3
Pfam PF02136
Panther DB PTHR12612
NCBI CDD KOG2104; Nuclear transport factor 2
KEGG Orthology -
Gene Ontology GO:0006810; transport GO:0005622intracellular


Orthologs (automatic annotation)
TAIR AT1G27970 : nuclear transport factor 2B
RAP-DB (Rice) LOC_Os08g42000.1 : nuclear transport factor, putative, expressed
MaizeGDB (Corn) Zm00025a030407 , Zm00025a005273
Brachypodium KQJ99134
Barley HORVU7Hr1G054440.1
Wheat TraesCS7B02G159000 , TraesCS7A02G262400 , TraesCS7D02G262100
Populus -


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cDNA sequences
Sobic.007G192800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G315000 homeobox-leucine zipper protein ATHB-54, putative, expressed -
2 Sobic.010G210050 - -
3 Sobic.006G088450 - -
4 Sobic.005G135300 chalcone and stilbene synthases, putative, expressed -
5 Sobic.002G288500 serine/threonine kinase, putative, expressed -
6 Sobic.002G091500 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.006G266850 - -
8 Sobic.008G131601 - -
9 Sobic.002G176800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
10 Sobic.005G068400 - -
11 Sobic.006G246400 protein kinase domain containing protein, expressed -
12 Sobic.001G033800 expressed protein -
13 Sobic.010G196433 - -
14 Sobic.002G244901 - -
15 Sobic.008G174000 OsFBX464 - F-box domain containing protein, expressed -
16 Sobic.007G138200 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
17 Sobic.001G515350 - -
18 Sobic.004G295900 cell division cycle protein 23, putative, expressed K03355: APC8, anaphase-promoting complex subunit 8
19 Sobic.009G223000 - -
20 Sobic.003G364550 - -


Gene co-expression network
sample Sobic007G192800 Sobic007G192800 Sobic003G315000 Sobic003G315000 Sobic007G192800--Sobic003G315000 Sobic010G210050 Sobic010G210050 Sobic007G192800--Sobic010G210050 Sobic006G088450 Sobic006G088450 Sobic007G192800--Sobic006G088450 Sobic005G135300 Sobic005G135300 Sobic007G192800--Sobic005G135300 Sobic002G288500 Sobic002G288500 Sobic007G192800--Sobic002G288500 Sobic002G091500 Sobic002G091500 Sobic007G192800--Sobic002G091500 Sobic006G266850 Sobic006G266850 Sobic007G192800--Sobic006G266850 Sobic008G131601 Sobic008G131601 Sobic007G192800--Sobic008G131601 Sobic002G176800 Sobic002G176800 Sobic007G192800--Sobic002G176800 Sobic003G315000--Sobic006G266850 Sobic003G315000--Sobic006G088450 Sobic003G315000--Sobic002G091500 Sobic003G315000--Sobic005G135300 Sobic005G068400 Sobic005G068400 Sobic003G315000--Sobic005G068400 Sobic003G315000--Sobic008G131601 Sobic003G315000--Sobic002G288500 Sobic002G051500 Sobic002G051500 Sobic003G315000--Sobic002G051500 Sobic003G315000--Sobic002G176800 Sobic010G196433 Sobic010G196433 Sobic010G210050--Sobic010G196433 Sobic010G210050--Sobic002G176800 Sobic010G210050--Sobic006G266850 Sobic005G031901 Sobic005G031901 Sobic010G210050--Sobic005G031901 Sobic002G244901 Sobic002G244901 Sobic010G210050--Sobic002G244901 Sobic006G246400 Sobic006G246400 Sobic010G210050--Sobic006G246400 Sobic001G033800 Sobic001G033800 Sobic010G210050--Sobic001G033800 Sobic009G036366 Sobic009G036366 Sobic010G210050--Sobic009G036366 Sobic004G358301 Sobic004G358301 Sobic010G210050--Sobic004G358301 Sobic006G088450--Sobic005G068400 Sobic006G088450--Sobic005G135300 Sobic006G088450--Sobic002G288500 Sobic006G088450--Sobic008G131601 Sobic004G295900 Sobic004G295900 Sobic006G088450--Sobic004G295900 Sobic006G088450--Sobic002G051500 Sobic003G364550 Sobic003G364550 Sobic006G088450--Sobic003G364550 Sobic006G088450--Sobic003G315000 Sobic001G336600 Sobic001G336600 Sobic006G088450--Sobic001G336600 Sobic005G135300--Sobic005G068400 Sobic005G135300--Sobic008G131601 Sobic005G135300--Sobic006G088450 Sobic005G135300--Sobic002G288500 Sobic005G135300--Sobic003G364550 Sobic005G135300--Sobic001G336600 Sobic005G135300--Sobic002G051500 Sobic005G135300--Sobic002G091500 Sobic005G135300--Sobic004G295900 Sobic002G288500--Sobic006G088450 Sobic002G288500--Sobic005G068400 Sobic002G288500--Sobic005G135300 Sobic009G223000 Sobic009G223000 Sobic002G288500--Sobic009G223000 Sobic002G288500--Sobic002G051500 Sobic002G288500--Sobic003G364550 Sobic002G288500--Sobic008G131601 Sobic002G288500--Sobic009G036366 Sobic002G288500--Sobic004G295900 Sobic002G091500--Sobic008G131601 Sobic002G091500--Sobic006G266850 Sobic002G091500--Sobic005G135300 Sobic008G174000 Sobic008G174000 Sobic002G091500--Sobic008G174000 Sobic002G091500--Sobic001G336600 Sobic002G091500--Sobic003G315000 Sobic002G091500--Sobic006G088450 Sobic002G091500--Sobic005G068400 Sobic009G069400 Sobic009G069400 Sobic002G091500--Sobic009G069400 Sobic006G266850--Sobic002G091500 Sobic006G266850--Sobic010G210050 Sobic006G266850--Sobic006G246400 Sobic006G266850--Sobic008G131601 Sobic006G266850--Sobic003G315000 Sobic006G266850--Sobic002G176800 Sobic006G266850--Sobic005G135300 Sobic006G266850--Sobic006G088450 Sobic006G266850--Sobic010G196433 Sobic008G131601--Sobic005G135300 Sobic008G131601--Sobic001G336600 Sobic008G131601--Sobic002G091500 Sobic008G131601--Sobic005G068400 Sobic008G131601--Sobic006G088450 Sobic008G131601--Sobic003G364550 Sobic007G193900 Sobic007G193900 Sobic008G131601--Sobic007G193900 Sobic003G352750 Sobic003G352750 Sobic008G131601--Sobic003G352750 Sobic008G131601--Sobic006G266850 Sobic002G176800--Sobic010G210050 Sobic009G162550 Sobic009G162550 Sobic002G176800--Sobic009G162550 Sobic002G176800--Sobic006G266850 Sobic002G176800--Sobic005G135300 Sobic002G176800--Sobic008G131601 Sobic002G176800--Sobic010G196433 Sobic002G176800--Sobic009G036366 Sobic002G176800--Sobic006G088450 Sobic006G208700 Sobic006G208700 Sobic002G176800--Sobic006G208700
Octagon: transcription factors


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