Gene annotation
Transcriptome id Sobic.004G295900.1,Sobic.004G295900.3,Sobic.004G295900.2
Synonym Sb04g032980, APC8, CDC23
Functional annotation cell division cycle protein 23, putative, expressed
UniProt A0A1Z5RPQ2 , C5XRY8
Pfam PF13414 PF13181 PF04049
Panther DB PTHR12558 PTHR12558:SF10
NCBI CDD -
KEGG Orthology K03355; APC8, anaphase-promoting complex subunit 8
Gene Ontology GO:0005515; protein binding GO:0005680anaphase-promoting complex


Orthologs (automatic annotation)
TAIR AT3G48150 : anaphase-promoting complex subunit 8
RAP-DB (Rice) LOC_Os02g43920.1 : cell division cycle protein 23, putative, expressed
MaizeGDB (Corn) Zm00025a020885
Brachypodium KQK00601
Barley HORVU0Hr1G027080.5 , HORVU0Hr1G027080.4 , HORVU0Hr1G027080.6 , HORVU0Hr1G027080.1 , HORVU0Hr1G027080.3 , HORVU0Hr1G027080.2 , HORVU6Hr1G062870.1 , HORVU6Hr1G062870.3 , HORVU6Hr1G062870.2
Wheat TraesCS6D02G233200 , TraesCS6B02G273900 , TraesCS6A02G251400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G068400 - -
2 Sobic.006G088450 - -
3 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
4 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
5 Sobic.009G149600 transmembrane protein 18, putative, expressed -
6 Sobic.002G288500 serine/threonine kinase, putative, expressed -
7 Sobic.005G135300 chalcone and stilbene synthases, putative, expressed -
8 Sobic.001G033800 expressed protein -
9 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
10 Sobic.002G104500 disease resistance RPP13-like protein 1, putative, expressed -
11 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
12 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.003G308900 expressed protein -
14 Sobic.002G051500 expressed protein -
15 Sobic.004G007200 - -
16 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
17 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
18 Sobic.002G399000 expressed protein -
19 Sobic.002G037700 expressed protein K10891: fanconi anemia group D2 protein
20 Sobic.008G016400 - -


Gene co-expression network
sample Sobic004G295900 Sobic004G295900 Sobic005G068400 Sobic005G068400 Sobic004G295900--Sobic005G068400 Sobic006G088450 Sobic006G088450 Sobic004G295900--Sobic006G088450 Sobic010G249600 Sobic010G249600 Sobic004G295900--Sobic010G249600 Sobic007G226000 Sobic007G226000 Sobic004G295900--Sobic007G226000 Sobic009G149600 Sobic009G149600 Sobic004G295900--Sobic009G149600 Sobic002G288500 Sobic002G288500 Sobic004G295900--Sobic002G288500 Sobic005G135300 Sobic005G135300 Sobic004G295900--Sobic005G135300 Sobic001G033800 Sobic001G033800 Sobic004G295900--Sobic001G033800 Sobic007G185000 Sobic007G185000 Sobic004G295900--Sobic007G185000 Sobic005G068400--Sobic006G088450 Sobic005G068400--Sobic005G135300 Sobic005G068400--Sobic002G288500 Sobic008G131601 Sobic008G131601 Sobic005G068400--Sobic008G131601 Sobic002G051500 Sobic002G051500 Sobic005G068400--Sobic002G051500 Sobic003G364550 Sobic003G364550 Sobic005G068400--Sobic003G364550 Sobic001G336600 Sobic001G336600 Sobic005G068400--Sobic001G336600 Sobic005G068400--Sobic004G295900 Sobic003G352750 Sobic003G352750 Sobic005G068400--Sobic003G352750 Sobic006G088450--Sobic005G068400 Sobic006G088450--Sobic005G135300 Sobic006G088450--Sobic002G288500 Sobic006G088450--Sobic008G131601 Sobic006G088450--Sobic004G295900 Sobic006G088450--Sobic002G051500 Sobic006G088450--Sobic003G364550 Sobic003G315000 Sobic003G315000 Sobic006G088450--Sobic003G315000 Sobic006G088450--Sobic001G336600 Sobic003G440500 Sobic003G440500 Sobic010G249600--Sobic003G440500 Sobic002G398600 Sobic002G398600 Sobic010G249600--Sobic002G398600 Sobic002G377400 Sobic002G377400 Sobic010G249600--Sobic002G377400 Sobic003G308900 Sobic003G308900 Sobic010G249600--Sobic003G308900 Sobic008G016800 Sobic008G016800 Sobic010G249600--Sobic008G016800 Sobic009G223900 Sobic009G223900 Sobic010G249600--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic010G249600--Sobic002G085600 Sobic004G224000 Sobic004G224000 Sobic010G249600--Sobic004G224000 Sobic001G191300 Sobic001G191300 Sobic010G249600--Sobic001G191300 Sobic008G065700 Sobic008G065700 Sobic007G226000--Sobic008G065700 Sobic007G226000--Sobic007G185000 Sobic007G226000--Sobic010G249600 Sobic007G226000--Sobic004G224000 Sobic003G149400 Sobic003G149400 Sobic007G226000--Sobic003G149400 Sobic001G367900 Sobic001G367900 Sobic007G226000--Sobic001G367900 Sobic009G240300 Sobic009G240300 Sobic007G226000--Sobic009G240300 Sobic007G226000--Sobic003G440500 Sobic003G092150 Sobic003G092150 Sobic007G226000--Sobic003G092150 Sobic009G149600--Sobic001G191300 Sobic001G350300 Sobic001G350300 Sobic009G149600--Sobic001G350300 Sobic009G149600--Sobic010G249600 Sobic004G350600 Sobic004G350600 Sobic009G149600--Sobic004G350600 Sobic006G249600 Sobic006G249600 Sobic009G149600--Sobic006G249600 Sobic002G399000 Sobic002G399000 Sobic009G149600--Sobic002G399000 Sobic007G077466 Sobic007G077466 Sobic009G149600--Sobic007G077466 Sobic009G149600--Sobic009G223900 Sobic003G155800 Sobic003G155800 Sobic009G149600--Sobic003G155800 Sobic002G288500--Sobic006G088450 Sobic002G288500--Sobic005G068400 Sobic002G288500--Sobic005G135300 Sobic009G223000 Sobic009G223000 Sobic002G288500--Sobic009G223000 Sobic002G288500--Sobic002G051500 Sobic002G288500--Sobic003G364550 Sobic002G288500--Sobic008G131601 Sobic009G036366 Sobic009G036366 Sobic002G288500--Sobic009G036366 Sobic002G288500--Sobic004G295900 Sobic005G135300--Sobic005G068400 Sobic005G135300--Sobic008G131601 Sobic005G135300--Sobic006G088450 Sobic005G135300--Sobic002G288500 Sobic005G135300--Sobic003G364550 Sobic005G135300--Sobic001G336600 Sobic005G135300--Sobic002G051500 Sobic002G091500 Sobic002G091500 Sobic005G135300--Sobic002G091500 Sobic005G135300--Sobic004G295900 Sobic002G358200 Sobic002G358200 Sobic001G033800--Sobic002G358200 Sobic001G033800--Sobic009G036366 Sobic001G033800--Sobic004G295900 Sobic001G033800--Sobic002G288500 Sobic010G210050 Sobic010G210050 Sobic001G033800--Sobic010G210050 Sobic001G033800--Sobic006G088450 Sobic001G033800--Sobic009G149600 Sobic002G104500 Sobic002G104500 Sobic001G033800--Sobic002G104500 Sobic003G159400 Sobic003G159400 Sobic001G033800--Sobic003G159400 Sobic007G185000--Sobic002G377400 Sobic007G185000--Sobic003G308900 Sobic003G243750 Sobic003G243750 Sobic007G185000--Sobic003G243750 Sobic007G185000--Sobic003G440500 Sobic009G203600 Sobic009G203600 Sobic007G185000--Sobic009G203600 Sobic007G165100 Sobic007G165100 Sobic007G185000--Sobic007G165100 Sobic007G185000--Sobic007G226000 Sobic009G047033 Sobic009G047033 Sobic007G185000--Sobic009G047033 Sobic007G185000--Sobic010G249600
Octagon: transcription factors


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