Gene annotation
| Transcriptome id | Sobic.006G255500.1 |
|---|---|
| Synonym | Sb06g031920, FRUCT5, AtcwINV3, ATFRUCT5 |
| Functional annotation | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543) glycosyl hydrolases, putative, expressed |
| UniProt | C5Y9Z2 |
| Pfam | PF08244 PF00251 |
| Panther DB | PTHR31953 PTHR31953:SF8 |
| NCBI CDD | - |
| KEGG Orthology | K01193; INV, beta-fructofuranosidase |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G55120 : beta-fructofuranosidase 5 |
|---|---|
| RAP-DB (Rice) | LOC_Os09g08072.1 : glycosyl hydrolases, putative, expressed |
| MaizeGDB (Corn) | Zm00025a009410 , Zm00025a009413 , Zm00025a009412 |
| Brachypodium | KQJ85160 , PNT62757 , KQJ86808 , PNT62756 |
| Barley | HORVU2Hr1G109080.8 , HORVU2Hr1G109080.9 , HORVU2Hr1G109080.1 , HORVU2Hr1G109080.2 , HORVU2Hr1G109080.3 , HORVU2Hr1G109080.14 , HORVU2Hr1G109080.4 , HORVU2Hr1G109080.5 , HORVU2Hr1G109080.7 , HORVU2Hr1G109080.12 , HORVU2Hr1G109080.13 , HORVU2Hr1G109080.10 , HORVU2Hr1G109080.11 |
| Wheat | TraesCS2A02G488500 , TraesCS2A02G488500 , TraesCS2B02G516900 , TraesCS2D02G489200 , TraesCS2D02G489200 , TraesCS2B02G516800 , TraesCS2A02G488900 , TraesCS2A02G488900 , TraesCS2D02G489300 , TraesCS2B02G516300 , TraesCS2A02G489000 , TraesCS2A02G489100 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G328900 | expressed protein | - |
| 2 | Sobic.005G224400 | highly expressed in root hairs(PubMedID : 17998204)@O-methyltransferase, putative, expressed | - |
| 3 | Sobic.001G012300 | "similar to Cytochrome P450 79A1, up-regulated under drought stress "(PubMedID : 24655390)@similar to Cytochrome P450 79A1(PubMedID : 24655390)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@Tyrosine N-monooxygenase(PubMedID : 27964718)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 21880107)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 26361733)@cytochrome P450, putative, expressed | K13027: tyrosine N-monooxygenase |
| 4 | Sobic.010G225001 | - | - |
| 5 | Sobic.009G253300 | Myb family transcription factor(PubMedID : 26320239)@Myb transcription factor, putative, expressed | - |
| 6 | Sobic.004G328601 | - | K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase |
| 7 | Sobic.004G147400 | dirigent, putative, expressed | - |
| 8 | Sobic.001G012200 | similar to Cytochrome P450 71E1(PubMedID : 24655390)@4-hydroxyphenylacetaldehyde oxime monooxygenase(PubMedID : 27964718)@cytochrome P450, putative, expressed | K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase |
| 9 | Sobic.009G072800 | proteophosphoglycan ppg4, putative, expressed | - |
| 10 | Sobic.001G190500 | dirigent, putative, expressed | - |
| 11 | Sobic.010G120200 | anthocyanidin 3-O-glucosyltransferase, putative, expressed | - |
| 12 | Sobic.001G012400 | "UDP-glucose glucosyltransferase, up-regulated under drought stress "(PubMedID : 24655390)@p-hydroxymandelonitrile-O-glucosyltransferase(PubMedID : 10585420)@-(PubMedID : 27964718)@UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase. in vitro substrate regiospecificity(PubMedID : 12946413)@"Cyanohydrin beta-glucosyltransferase, similar to UDP-glucose glucosyltransferase, dhurrin biosynthesis"(PubMedID : 10585420)@cytokinin-O-glucosyltransferase 2, putative, expressed | K13030: cyanohydrin beta-glucosyltransferase |
| 13 | Sobic.002G415300 | - | - |
| 14 | Sobic.007G181000 | serpin domain containing protein, putative, expressed | K13963: serpin B |
| 15 | Sobic.002G415400 | - | - |
| 16 | Sobic.009G206000 | anthocyanidin 5,3-O-glucosyltransferase, putative, expressed | - |
| 17 | Sobic.002G416950 | - | - |
| 18 | Sobic.001G012600 | MATE efflux family protein, putative, expressed | K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family |
| 19 | Sobic.006G033800 | cytochrome P450, putative, expressed | - |
| 20 | Sobic.001G435600 | - | - |
Gene co-expression network
Octagon: transcription factors
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