Gene annotation
| Transcriptome id | Sobic.005G224400.1 |
|---|---|
| Synonym | Sb05g027340, SbOMT2, O-methyltransferase |
| Functional annotation | highly expressed in root hairs (PubMedID : 17998204) O-methyltransferase, putative, expressed |
| UniProt | A8QW51 |
| Pfam | PF08100 PF00891 |
| Panther DB | PTHR11746 PTHR11746:SF91 |
| NCBI CDD | KOG3178; Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases |
| KEGG Orthology | - |
| Gene Ontology | GO:0008171; O-methyltransferase activity |
Orthologs (automatic annotation)
| TAIR | AT4G35150 : O-methyltransferase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os11g20090.1 : O-methyltransferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a029107 |
| Brachypodium | - |
| Barley | HORVU4Hr1G012540.1 , HORVU4Hr1G012540.2 |
| Wheat | TraesCS4B02G075100 , TraesCS7D02G079600 , TraesCS4A02G383100 , TraesCS4A02G383100 , TraesCS4A02G383400 , TraesCS4A02G383500 , TraesCS4D02G073800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G033400 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 2 | Sobic.001G459000 | expressed protein | - |
| 3 | Sobic.003G443200 | xylem cysteine proteinase 2 precursor, putative, expressed | K16290: xylem cysteine proteinase |
| 4 | Sobic.009G253300 | Myb family transcription factor(PubMedID : 26320239)@Myb transcription factor, putative, expressed | - |
| 5 | Sobic.004G147400 | dirigent, putative, expressed | - |
| 6 | Sobic.001G012300 | "similar to Cytochrome P450 79A1, up-regulated under drought stress "(PubMedID : 24655390)@similar to Cytochrome P450 79A1(PubMedID : 24655390)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@Tyrosine N-monooxygenase(PubMedID : 27964718)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 21880107)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 26361733)@cytochrome P450, putative, expressed | K13027: tyrosine N-monooxygenase |
| 7 | Sobic.006G255500 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolases, putative, expressed | K01193: INV, beta-fructofuranosidase |
| 8 | Sobic.007G008400 | - | - |
| 9 | Sobic.003G272900 | - | - |
| 10 | Sobic.003G006100 | Leucine Rich Repeat family protein, expressed | - |
| 11 | Sobic.001G140800 | helix-loop-helix DNA-binding protein, putative, expressed | - |
| 12 | Sobic.001G190500 | dirigent, putative, expressed | - |
| 13 | Sobic.005G056201 | - | - |
| 14 | Sobic.001G334900 | X8 domain containing protein, expressed | - |
| 15 | Sobic.010G228100 | "DEP3(Ortholog in rice:Qiao et al., 2011)"(PubMedID : 31659937)@PLA IIIA/PLP7, putative, expressed | - |
| 16 | Sobic.005G165400 | OsSub17 - Putative Subtilisin homologue, expressed | - |
| 17 | Sobic.001G012200 | similar to Cytochrome P450 71E1(PubMedID : 24655390)@4-hydroxyphenylacetaldehyde oxime monooxygenase(PubMedID : 27964718)@cytochrome P450, putative, expressed | K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase |
| 18 | Sobic.001G012400 | "UDP-glucose glucosyltransferase, up-regulated under drought stress "(PubMedID : 24655390)@p-hydroxymandelonitrile-O-glucosyltransferase(PubMedID : 10585420)@-(PubMedID : 27964718)@UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase. in vitro substrate regiospecificity(PubMedID : 12946413)@"Cyanohydrin beta-glucosyltransferase, similar to UDP-glucose glucosyltransferase, dhurrin biosynthesis"(PubMedID : 10585420)@cytokinin-O-glucosyltransferase 2, putative, expressed | K13030: cyanohydrin beta-glucosyltransferase |
| 19 | Sobic.005G145100 | phospholipase A2, putative, expressed | - |
| 20 | Sobic.002G028500 | app1, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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